RNA–Protein interactions for RNA: ENST00000516252.1

RNU6-415P-201, Transcript of RNA, U6 small nuclear 415, pseudogene, humanhuman

BASIC

Gene RNU6-415P, Length 97 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-415P-201ENST00000516252 AEBP2Q6ZN18 517 aaPredicted RBP32.85■■■□□ 2.85
RNU6-415P-201ENST00000516252 CHIC1Q5VXU3 224 aa31.84■■■□□ 2.69
RNU6-415P-201ENST00000516252 SENP3Q9H4L4 574 aaPredicted RBP28.11■■■□□ 2.09
RNU6-415P-201ENST00000516252 PHF23Q9BUL5 403 aaPredicted RBP27.87■■■□□ 2.05
RNU6-415P-201ENST00000516252 FOXD1Q16676 465 aa26.01■■□□□ 1.75
RNU6-415P-201ENST00000516252 PLPPR3Q6T4P5 718 aa25.78■■□□□ 1.72
RNU6-415P-201ENST00000516252 PPP6R1Q9UPN7 881 aa24.69■■□□□ 1.54
RNU6-415P-201ENST00000516252 ADRA2BP18089 450 aa24.68■■□□□ 1.54
RNU6-415P-201ENST00000516252 PIAS4Q8N2W9 510 aaPredicted RBP24.52■■□□□ 1.52
RNU6-415P-201ENST00000516252 MSH5O43196 834 aa24.27■■□□□ 1.48
RNU6-415P-201ENST00000516252 SCAF1Q9H7N4 1312 aaKnown RBP22.8■■□□□ 1.24
RNU6-415P-201ENST00000516252 POTEDQ86YR6 584 aa22.61■■□□□ 1.21
RNU6-415P-201ENST00000516252 PPP4R3CPQ6ZMV5 832 aa22.6■■□□□ 1.21
RNU6-415P-201ENST00000516252 MAPK8IP2Q13387 824 aaPredicted RBP22.47■■□□□ 1.19
RNU6-415P-201ENST00000516252 DMRT2Q9Y5R5 561 aa22.33■■□□□ 1.17
RNU6-415P-201ENST00000516252 CNKSR2Q8WXI2 1034 aa22.11■■□□□ 1.13
RNU6-415P-201ENST00000516252 NCBP3Q53F19 620 aaKnown RBP22.03■■□□□ 1.12
RNU6-415P-201ENST00000516252 RNF216Q9NWF9 866 aaPredicted RBP21.76■■□□□ 1.07
RNU6-415P-201ENST00000516252 HOXD11P31277 338 aaPredicted RBP21.73■■□□□ 1.07
RNU6-415P-201ENST00000516252 KCNA4P22459 653 aa21.61■■□□□ 1.05
RNU6-415P-201ENST00000516252 NPM3O75607 178 aaKnown RBP21.56■■□□□ 1.04
RNU6-415P-201ENST00000516252 DCAF8L1A6NGE4 600 aa21.41■■□□□ 1.02
RNU6-415P-201ENST00000516252 DNAJC5BQ9UF47 199 aa21.07■□□□□ 0.96
RNU6-415P-201ENST00000516252 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.75■□□□□ 0.91
RNU6-415P-201ENST00000516252 RNF39Q9H2S5 420 aa20.69■□□□□ 0.9
RNU6-415P-201ENST00000516252 SLC4A1APQ9BWU0 796 aaKnown RBP20.6■□□□□ 0.89
RNU6-415P-201ENST00000516252 C1QBPQ07021 282 aaKnown RBP20.49■□□□□ 0.87
RNU6-415P-201ENST00000516252 CACNB1Q02641 598 aaPredicted RBP20.45■□□□□ 0.86
RNU6-415P-201ENST00000516252 SLC4A2P04920 1241 aa20.4■□□□□ 0.86
RNU6-415P-201ENST00000516252 U3KPZ7 1027 aaPredicted RBP20.3■□□□□ 0.84
RNU6-415P-201ENST00000516252 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.1■□□□□ 0.81
RNU6-415P-201ENST00000516252 HNRNPUL2Q1KMD3 747 aaKnown RBP20.1■□□□□ 0.81
RNU6-415P-201ENST00000516252 FOXD4L1Q9NU39 408 aa20.09■□□□□ 0.81
RNU6-415P-201ENST00000516252 MYCNP04198 464 aaPredicted RBP20.02■□□□□ 0.8
RNU6-415P-201ENST00000516252 APLP2Q06481 763 aa20.02■□□□□ 0.8
RNU6-415P-201ENST00000516252 SAMD1Q6SPF0 538 aaPredicted RBP19.97■□□□□ 0.79
RNU6-415P-201ENST00000516252 CAPN15O75808 1086 aa19.84■□□□□ 0.77
RNU6-415P-201ENST00000516252 ZBTB22O15209 634 aa19.83■□□□□ 0.77
RNU6-415P-201ENST00000516252 SPINK5Q9NQ38 1064 aaPredicted RBP19.81■□□□□ 0.76
RNU6-415P-201ENST00000516252 ZNF219Q9P2Y4 722 aaPredicted RBP19.71■□□□□ 0.75
RNU6-415P-201ENST00000516252 TRHP20396 242 aaPredicted RBP19.64■□□□□ 0.73
RNU6-415P-201ENST00000516252 EHMT2Q96KQ7 1210 aa19.55■□□□□ 0.72
RNU6-415P-201ENST00000516252 DSG3P32926 999 aa19.54■□□□□ 0.72
RNU6-415P-201ENST00000516252 ATXN8OSP0DMR3 200 aa19.48■□□□□ 0.71
RNU6-415P-201ENST00000516252 CSRNP3Q8WYN3 585 aa19.46■□□□□ 0.71
RNU6-415P-201ENST00000516252 ABCB7O75027 752 aa19.37■□□□□ 0.69
RNU6-415P-201ENST00000516252 ATF5Q9Y2D1 282 aaPredicted RBP19.35■□□□□ 0.69
RNU6-415P-201ENST00000516252 POLA2Q14181 598 aa19.24■□□□□ 0.67
RNU6-415P-201ENST00000516252 ZBTB12Q9Y330 459 aaPredicted RBP19.02■□□□□ 0.64
RNU6-415P-201ENST00000516252 RBM42Q9BTD8 480 aaKnown RBP18.78■□□□□ 0.6
RNU6-415P-201ENST00000516252 FBLN2P98095 1184 aa18.76■□□□□ 0.59
RNU6-415P-201ENST00000516252 OSCARQ8IYS5 282 aa18.58■□□□□ 0.56
RNU6-415P-201ENST00000516252 MKRN4PQ13434 485 aaPredicted RBP18.51■□□□□ 0.55
RNU6-415P-201ENST00000516252 SPDYE2BA6NHP3 402 aa18.41■□□□□ 0.54
RNU6-415P-201ENST00000516252 SPDYE6P0CI01 402 aa18.41■□□□□ 0.54
RNU6-415P-201ENST00000516252 SPDYE2Q495Y8 402 aa18.41■□□□□ 0.54
RNU6-415P-201ENST00000516252 AKT1S1Q96B36 256 aa18.4■□□□□ 0.54
RNU6-415P-201ENST00000516252 ZNF692Q9BU19 519 aaPredicted RBP18.27■□□□□ 0.52
RNU6-415P-201ENST00000516252 REM2Q8IYK8 340 aaPredicted RBP18.17■□□□□ 0.5
RNU6-415P-201ENST00000516252 SSUH2Q9Y2M2 353 aa18.17■□□□□ 0.5
RNU6-415P-201ENST00000516252 CHRDL2Q6WN34 429 aa18.04■□□□□ 0.48
RNU6-415P-201ENST00000516252 SPDYE4A6NLX3 237 aa18.03■□□□□ 0.48
RNU6-415P-201ENST00000516252 PABPN1Q86U42 306 aaKnown RBP eCLIP17.98■□□□□ 0.47
RNU6-415P-201ENST00000516252 SPDYE1Q8NFV5 336 aaPredicted RBP17.96■□□□□ 0.47
RNU6-415P-201ENST00000516252 PITPNM1O00562 1244 aa17.95■□□□□ 0.46
RNU6-415P-201ENST00000516252 POTEHQ6S545 545 aa17.87■□□□□ 0.45
RNU6-415P-201ENST00000516252 CLEC11AQ9Y240 323 aa17.86■□□□□ 0.45
RNU6-415P-201ENST00000516252 STAG3Q9UJ98 1225 aa17.72■□□□□ 0.43
RNU6-415P-201ENST00000516252 FXR2P51116 673 aaKnown RBP eCLIP17.7■□□□□ 0.42
RNU6-415P-201ENST00000516252 PIP4P2Q8N4L2 257 aa17.7■□□□□ 0.42
RNU6-415P-201ENST00000516252 PRR29P0C7W0 189 aa17.68■□□□□ 0.42
RNU6-415P-201ENST00000516252 FKBP8Q14318 412 aa17.67■□□□□ 0.42
RNU6-415P-201ENST00000516252 PROM2Q8N271 834 aa17.64■□□□□ 0.41
RNU6-415P-201ENST00000516252 PRKAR2AP13861 404 aaKnown RBP17.53■□□□□ 0.4
RNU6-415P-201ENST00000516252 CHADLQ6NUI6 762 aa17.39■□□□□ 0.37
RNU6-415P-201ENST00000516252 HAX1O00165 279 aa17.28■□□□□ 0.36
RNU6-415P-201ENST00000516252 CREBZFQ9NS37 354 aa17.28■□□□□ 0.36
RNU6-415P-201ENST00000516252 FBXO3Q9UK99 471 aa17.28■□□□□ 0.36
RNU6-415P-201ENST00000516252 FARP1Q9Y4F1 1045 aaPredicted RBP17.25■□□□□ 0.35
RNU6-415P-201ENST00000516252 PLEKHG5O94827 1062 aa17.23■□□□□ 0.35
RNU6-415P-201ENST00000516252 MIER1Q8N108 512 aa17.16■□□□□ 0.34
RNU6-415P-201ENST00000516252 NPM1P06748 294 aaKnown RBP eCLIP17.13■□□□□ 0.33
RNU6-415P-201ENST00000516252 PLCD3Q8N3E9 789 aa17.12■□□□□ 0.33
RNU6-415P-201ENST00000516252 C19orf67A6NJJ6 358 aa17.11■□□□□ 0.33
RNU6-415P-201ENST00000516252 MNX1P50219 401 aaPredicted RBP17.04■□□□□ 0.32
RNU6-415P-201ENST00000516252 SP7Q8TDD2 431 aaPredicted RBP17.04■□□□□ 0.32
RNU6-415P-201ENST00000516252 ZBTB47Q9UFB7 747 aaPredicted RBP17.04■□□□□ 0.32
RNU6-415P-201ENST00000516252 CD44P16070 742 aaKnown RBP17.01■□□□□ 0.31
RNU6-415P-201ENST00000516252 PAK3O75914 559 aaPredicted RBP16.96■□□□□ 0.31
RNU6-415P-201ENST00000516252 EVX2Q03828 476 aa16.95■□□□□ 0.3
RNU6-415P-201ENST00000516252 VASPP50552 380 aaPredicted RBP16.94■□□□□ 0.3
RNU6-415P-201ENST00000516252 ZRANB1Q9UGI0 708 aa16.86■□□□□ 0.29
RNU6-415P-201ENST00000516252 CLCN6P51797 869 aa16.83■□□□□ 0.28
RNU6-415P-201ENST00000516252 KLHL34Q8N239 644 aa16.79■□□□□ 0.28
RNU6-415P-201ENST00000516252 ZNF579Q8NAF0 562 aaKnown RBP16.78■□□□□ 0.28
RNU6-415P-201ENST00000516252 TSPYL2Q9H2G4 693 aaPredicted RBP16.72■□□□□ 0.27
RNU6-415P-201ENST00000516252 GABBR2O75899 941 aa16.71■□□□□ 0.27
RNU6-415P-201ENST00000516252 RASEFQ8IZ41 740 aa16.7■□□□□ 0.26
RNU6-415P-201ENST00000516252 NUBP1P53384 320 aa16.68■□□□□ 0.26
RNU6-415P-201ENST00000516252 FAM212AQ96EL1 285 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms