RNA–Protein interactions for RNA: ENST00000515950.1

RN7SKP298-201, Transcript of RNA, 7SK small nuclear pseudogene 298, humanhuman

BASIC

Gene RN7SKP298, Length 94 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP298-201ENST00000515950 AEBP2Q6ZN18 517 aaPredicted RBP22.76■■□□□ 1.23
RN7SKP298-201ENST00000515950 CHIC1Q5VXU3 224 aa22■■□□□ 1.11
RN7SKP298-201ENST00000515950 PHF23Q9BUL5 403 aaPredicted RBP19.37■□□□□ 0.69
RN7SKP298-201ENST00000515950 SENP3Q9H4L4 574 aaPredicted RBP19.28■□□□□ 0.68
RN7SKP298-201ENST00000515950 FOXD1Q16676 465 aa17.95■□□□□ 0.46
RN7SKP298-201ENST00000515950 PLPPR3Q6T4P5 718 aa17.75■□□□□ 0.43
RN7SKP298-201ENST00000515950 PPP6R1Q9UPN7 881 aa17.14■□□□□ 0.33
RN7SKP298-201ENST00000515950 ADRA2BP18089 450 aa17.08■□□□□ 0.32
RN7SKP298-201ENST00000515950 PIAS4Q8N2W9 510 aaPredicted RBP16.83■□□□□ 0.28
RN7SKP298-201ENST00000515950 MSH5O43196 834 aa16.59■□□□□ 0.25
RN7SKP298-201ENST00000515950 PPP4R3CPQ6ZMV5 832 aa15.62■□□□□ 0.09
RN7SKP298-201ENST00000515950 SCAF1Q9H7N4 1312 aaKnown RBP15.57■□□□□ 0.08
RN7SKP298-201ENST00000515950 MAPK8IP2Q13387 824 aaPredicted RBP15.56■□□□□ 0.08
RN7SKP298-201ENST00000515950 POTEDQ86YR6 584 aa15.47■□□□□ 0.07
RN7SKP298-201ENST00000515950 DMRT2Q9Y5R5 561 aa15.39■□□□□ 0.05
RN7SKP298-201ENST00000515950 CNKSR2Q8WXI2 1034 aa15.23■□□□□ 0.03
RN7SKP298-201ENST00000515950 NCBP3Q53F19 620 aaKnown RBP15.12■□□□□ 0.01
RN7SKP298-201ENST00000515950 KCNA4P22459 653 aa15.05■□□□□ -0
RN7SKP298-201ENST00000515950 HOXD11P31277 338 aaPredicted RBP15.01□□□□□ -0.01
RN7SKP298-201ENST00000515950 RNF216Q9NWF9 866 aaPredicted RBP14.99□□□□□ -0.01
RN7SKP298-201ENST00000515950 NPM3O75607 178 aaKnown RBP14.96□□□□□ -0.01
RN7SKP298-201ENST00000515950 DNAJC5BQ9UF47 199 aa14.63□□□□□ -0.07
RN7SKP298-201ENST00000515950 DCAF8L1A6NGE4 600 aa14.62□□□□□ -0.07
RN7SKP298-201ENST00000515950 SLC4A1APQ9BWU0 796 aaKnown RBP14.27□□□□□ -0.13
RN7SKP298-201ENST00000515950 RNF39Q9H2S5 420 aa14.24□□□□□ -0.13
RN7SKP298-201ENST00000515950 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.22□□□□□ -0.13
RN7SKP298-201ENST00000515950 SLC4A2P04920 1241 aa14.2□□□□□ -0.14
RN7SKP298-201ENST00000515950 U3KPZ7 1027 aaPredicted RBP14.04□□□□□ -0.16
RN7SKP298-201ENST00000515950 C1QBPQ07021 282 aaKnown RBP14.03□□□□□ -0.16
RN7SKP298-201ENST00000515950 CACNB1Q02641 598 aaPredicted RBP13.93□□□□□ -0.18
RN7SKP298-201ENST00000515950 ZBTB22O15209 634 aa13.89□□□□□ -0.19
RN7SKP298-201ENST00000515950 FOXD4L1Q9NU39 408 aa13.89□□□□□ -0.19
RN7SKP298-201ENST00000515950 MYCNP04198 464 aaPredicted RBP13.79□□□□□ -0.2
RN7SKP298-201ENST00000515950 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.73□□□□□ -0.21
RN7SKP298-201ENST00000515950 HNRNPUL2Q1KMD3 747 aaKnown RBP13.73□□□□□ -0.21
RN7SKP298-201ENST00000515950 SAMD1Q6SPF0 538 aaPredicted RBP13.69□□□□□ -0.22
RN7SKP298-201ENST00000515950 SPINK5Q9NQ38 1064 aaPredicted RBP13.69□□□□□ -0.22
RN7SKP298-201ENST00000515950 CSRNP3Q8WYN3 585 aa13.62□□□□□ -0.23
RN7SKP298-201ENST00000515950 APLP2Q06481 763 aa13.61□□□□□ -0.23
RN7SKP298-201ENST00000515950 EHMT2Q96KQ7 1210 aa13.61□□□□□ -0.23
RN7SKP298-201ENST00000515950 CAPN15O75808 1086 aa13.58□□□□□ -0.24
RN7SKP298-201ENST00000515950 ZNF219Q9P2Y4 722 aaPredicted RBP13.49□□□□□ -0.25
RN7SKP298-201ENST00000515950 ATF5Q9Y2D1 282 aaPredicted RBP13.48□□□□□ -0.25
RN7SKP298-201ENST00000515950 TRHP20396 242 aaPredicted RBP13.47□□□□□ -0.25
RN7SKP298-201ENST00000515950 DSG3P32926 999 aa13.47□□□□□ -0.25
RN7SKP298-201ENST00000515950 ATXN8OSP0DMR3 200 aa13.44□□□□□ -0.26
RN7SKP298-201ENST00000515950 ABCB7O75027 752 aa13.33□□□□□ -0.28
RN7SKP298-201ENST00000515950 POLA2Q14181 598 aa13.24□□□□□ -0.29
RN7SKP298-201ENST00000515950 ZBTB12Q9Y330 459 aaPredicted RBP12.99□□□□□ -0.33
RN7SKP298-201ENST00000515950 MKRN4PQ13434 485 aaPredicted RBP12.9□□□□□ -0.34
RN7SKP298-201ENST00000515950 FBLN2P98095 1184 aa12.85□□□□□ -0.35
RN7SKP298-201ENST00000515950 OSCARQ8IYS5 282 aa12.81□□□□□ -0.36
RN7SKP298-201ENST00000515950 RBM42Q9BTD8 480 aaKnown RBP12.79□□□□□ -0.36
RN7SKP298-201ENST00000515950 SPDYE2BA6NHP3 402 aa12.66□□□□□ -0.38
RN7SKP298-201ENST00000515950 SPDYE6P0CI01 402 aa12.66□□□□□ -0.38
RN7SKP298-201ENST00000515950 SPDYE2Q495Y8 402 aa12.66□□□□□ -0.38
RN7SKP298-201ENST00000515950 AKT1S1Q96B36 256 aa12.62□□□□□ -0.39
RN7SKP298-201ENST00000515950 SSUH2Q9Y2M2 353 aa12.57□□□□□ -0.4
RN7SKP298-201ENST00000515950 ZNF692Q9BU19 519 aaPredicted RBP12.54□□□□□ -0.4
RN7SKP298-201ENST00000515950 REM2Q8IYK8 340 aaPredicted RBP12.51□□□□□ -0.41
RN7SKP298-201ENST00000515950 SPDYE4A6NLX3 237 aa12.45□□□□□ -0.42
RN7SKP298-201ENST00000515950 PABPN1Q86U42 306 aaKnown RBP eCLIP12.39□□□□□ -0.43
RN7SKP298-201ENST00000515950 PITPNM1O00562 1244 aa12.37□□□□□ -0.43
RN7SKP298-201ENST00000515950 CHRDL2Q6WN34 429 aa12.35□□□□□ -0.43
RN7SKP298-201ENST00000515950 PROM2Q8N271 834 aa12.31□□□□□ -0.44
RN7SKP298-201ENST00000515950 SPDYE1Q8NFV5 336 aaPredicted RBP12.31□□□□□ -0.44
RN7SKP298-201ENST00000515950 FKBP8Q14318 412 aa12.27□□□□□ -0.45
RN7SKP298-201ENST00000515950 CLEC11AQ9Y240 323 aa12.22□□□□□ -0.45
RN7SKP298-201ENST00000515950 FXR2P51116 673 aaKnown RBP eCLIP12.2□□□□□ -0.46
RN7SKP298-201ENST00000515950 POTEHQ6S545 545 aa12.19□□□□□ -0.46
RN7SKP298-201ENST00000515950 PIP4P2Q8N4L2 257 aa12.17□□□□□ -0.46
RN7SKP298-201ENST00000515950 STAG3Q9UJ98 1225 aa12.13□□□□□ -0.47
RN7SKP298-201ENST00000515950 PRR29P0C7W0 189 aa12.1□□□□□ -0.47
RN7SKP298-201ENST00000515950 PRKAR2AP13861 404 aaKnown RBP12.03□□□□□ -0.48
RN7SKP298-201ENST00000515950 CHADLQ6NUI6 762 aa11.99□□□□□ -0.49
RN7SKP298-201ENST00000515950 CREBZFQ9NS37 354 aa11.97□□□□□ -0.49
RN7SKP298-201ENST00000515950 FBXO3Q9UK99 471 aa11.87□□□□□ -0.51
RN7SKP298-201ENST00000515950 FARP1Q9Y4F1 1045 aaPredicted RBP11.87□□□□□ -0.51
RN7SKP298-201ENST00000515950 MNX1P50219 401 aaPredicted RBP11.85□□□□□ -0.51
RN7SKP298-201ENST00000515950 C19orf67A6NJJ6 358 aa11.79□□□□□ -0.52
RN7SKP298-201ENST00000515950 MIER1Q8N108 512 aa11.79□□□□□ -0.52
RN7SKP298-201ENST00000515950 HAX1O00165 279 aa11.78□□□□□ -0.52
RN7SKP298-201ENST00000515950 VASPP50552 380 aaPredicted RBP11.76□□□□□ -0.53
RN7SKP298-201ENST00000515950 EVX2Q03828 476 aa11.75□□□□□ -0.53
RN7SKP298-201ENST00000515950 PLCD3Q8N3E9 789 aa11.75□□□□□ -0.53
RN7SKP298-201ENST00000515950 PLEKHG5O94827 1062 aa11.7□□□□□ -0.54
RN7SKP298-201ENST00000515950 NPM1P06748 294 aaKnown RBP eCLIP11.7□□□□□ -0.54
RN7SKP298-201ENST00000515950 CD44P16070 742 aaKnown RBP11.67□□□□□ -0.54
RN7SKP298-201ENST00000515950 SP7Q8TDD2 431 aaPredicted RBP11.63□□□□□ -0.55
RN7SKP298-201ENST00000515950 ZBTB47Q9UFB7 747 aaPredicted RBP11.63□□□□□ -0.55
RN7SKP298-201ENST00000515950 IFNLR1Q8IU57 520 aaPredicted RBP11.6□□□□□ -0.55
RN7SKP298-201ENST00000515950 NUBP1P53384 320 aa11.59□□□□□ -0.55
RN7SKP298-201ENST00000515950 RASEFQ8IZ41 740 aa11.58□□□□□ -0.56
RN7SKP298-201ENST00000515950 ZRANB1Q9UGI0 708 aa11.56□□□□□ -0.56
RN7SKP298-201ENST00000515950 ZNF579Q8NAF0 562 aaKnown RBP11.55□□□□□ -0.56
RN7SKP298-201ENST00000515950 KLHL34Q8N239 644 aa11.53□□□□□ -0.56
RN7SKP298-201ENST00000515950 PAK3O75914 559 aaPredicted RBP11.52□□□□□ -0.57
RN7SKP298-201ENST00000515950 TSPYL2Q9H2G4 693 aaPredicted RBP11.5□□□□□ -0.57
RN7SKP298-201ENST00000515950 CCDC61Q9Y6R9 512 aa11.5□□□□□ -0.57
RN7SKP298-201ENST00000515950 GABBR2O75899 941 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms