RNA–Protein interactions for RNA: ENST00000515910.1

RNU6-408P-201, Transcript of RNA, U6 small nuclear 408, pseudogene, humanhuman

BASIC

Gene RNU6-408P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-408P-201ENST00000515910 AEBP2Q6ZN18 517 aaPredicted RBP19.98■□□□□ 0.79
RNU6-408P-201ENST00000515910 CHIC1Q5VXU3 224 aa18.69■□□□□ 0.58
RNU6-408P-201ENST00000515910 SENP3Q9H4L4 574 aaPredicted RBP17■□□□□ 0.31
RNU6-408P-201ENST00000515910 PHF23Q9BUL5 403 aaPredicted RBP16.82■□□□□ 0.28
RNU6-408P-201ENST00000515910 FOXD1Q16676 465 aa15.95■□□□□ 0.14
RNU6-408P-201ENST00000515910 POTEDQ86YR6 584 aa15.06■□□□□ 0
RNU6-408P-201ENST00000515910 MSH5O43196 834 aa14.94□□□□□ -0.02
RNU6-408P-201ENST00000515910 PIAS4Q8N2W9 510 aaPredicted RBP14.83□□□□□ -0.04
RNU6-408P-201ENST00000515910 PLPPR3Q6T4P5 718 aa14.81□□□□□ -0.04
RNU6-408P-201ENST00000515910 PPP6R1Q9UPN7 881 aa14.76□□□□□ -0.05
RNU6-408P-201ENST00000515910 ADRA2BP18089 450 aa14.71□□□□□ -0.05
RNU6-408P-201ENST00000515910 MAPK8IP2Q13387 824 aaPredicted RBP13.61□□□□□ -0.23
RNU6-408P-201ENST00000515910 DMRT2Q9Y5R5 561 aa13.45□□□□□ -0.26
RNU6-408P-201ENST00000515910 SCAF1Q9H7N4 1312 aaKnown RBP13.37□□□□□ -0.27
RNU6-408P-201ENST00000515910 CACNB1Q02641 598 aaPredicted RBP13.04□□□□□ -0.32
RNU6-408P-201ENST00000515910 DCAF8L1A6NGE4 600 aa13.02□□□□□ -0.33
RNU6-408P-201ENST00000515910 PPP4R3CPQ6ZMV5 832 aa12.99□□□□□ -0.33
RNU6-408P-201ENST00000515910 HOXD11P31277 338 aaPredicted RBP12.86□□□□□ -0.35
RNU6-408P-201ENST00000515910 CNKSR2Q8WXI2 1034 aa12.77□□□□□ -0.37
RNU6-408P-201ENST00000515910 RNF39Q9H2S5 420 aa12.75□□□□□ -0.37
RNU6-408P-201ENST00000515910 RNF216Q9NWF9 866 aaPredicted RBP12.71□□□□□ -0.37
RNU6-408P-201ENST00000515910 C1QBPQ07021 282 aaKnown RBP12.53□□□□□ -0.4
RNU6-408P-201ENST00000515910 NCBP3Q53F19 620 aaKnown RBP12.37□□□□□ -0.43
RNU6-408P-201ENST00000515910 DNAJC5BQ9UF47 199 aa12.37□□□□□ -0.43
RNU6-408P-201ENST00000515910 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.31□□□□□ -0.44
RNU6-408P-201ENST00000515910 NPM3O75607 178 aaKnown RBP12.25□□□□□ -0.45
RNU6-408P-201ENST00000515910 U3KPZ7 1027 aaPredicted RBP12.02□□□□□ -0.49
RNU6-408P-201ENST00000515910 SPINK5Q9NQ38 1064 aaPredicted RBP11.95□□□□□ -0.5
RNU6-408P-201ENST00000515910 CAPN15O75808 1086 aa11.93□□□□□ -0.5
RNU6-408P-201ENST00000515910 DSG3P32926 999 aa11.89□□□□□ -0.51
RNU6-408P-201ENST00000515910 KCNA4P22459 653 aa11.82□□□□□ -0.52
RNU6-408P-201ENST00000515910 SLC4A2P04920 1241 aa11.76□□□□□ -0.53
RNU6-408P-201ENST00000515910 POTEHQ6S545 545 aa11.74□□□□□ -0.53
RNU6-408P-201ENST00000515910 TRHP20396 242 aaPredicted RBP11.7□□□□□ -0.54
RNU6-408P-201ENST00000515910 ABCB7O75027 752 aa11.66□□□□□ -0.54
RNU6-408P-201ENST00000515910 ZNF219Q9P2Y4 722 aaPredicted RBP11.57□□□□□ -0.56
RNU6-408P-201ENST00000515910 APLP2Q06481 763 aa11.56□□□□□ -0.56
RNU6-408P-201ENST00000515910 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.51□□□□□ -0.57
RNU6-408P-201ENST00000515910 HNRNPUL2Q1KMD3 747 aaKnown RBP11.51□□□□□ -0.57
RNU6-408P-201ENST00000515910 SAMD1Q6SPF0 538 aaPredicted RBP11.45□□□□□ -0.58
RNU6-408P-201ENST00000515910 POLA2Q14181 598 aa11.31□□□□□ -0.6
RNU6-408P-201ENST00000515910 MYCNP04198 464 aaPredicted RBP11.28□□□□□ -0.6
RNU6-408P-201ENST00000515910 RBM42Q9BTD8 480 aaKnown RBP11.28□□□□□ -0.6
RNU6-408P-201ENST00000515910 CHRDL2Q6WN34 429 aa11.18□□□□□ -0.62
RNU6-408P-201ENST00000515910 ATF5Q9Y2D1 282 aaPredicted RBP11.14□□□□□ -0.63
RNU6-408P-201ENST00000515910 SLC4A1APQ9BWU0 796 aaKnown RBP11.09□□□□□ -0.63
RNU6-408P-201ENST00000515910 FOXD4L1Q9NU39 408 aa11.05□□□□□ -0.64
RNU6-408P-201ENST00000515910 AKT1S1Q96B36 256 aa11□□□□□ -0.65
RNU6-408P-201ENST00000515910 OSCARQ8IYS5 282 aa10.95□□□□□ -0.66
RNU6-408P-201ENST00000515910 ZBTB12Q9Y330 459 aaPredicted RBP10.95□□□□□ -0.66
RNU6-408P-201ENST00000515910 REM2Q8IYK8 340 aaPredicted RBP10.94□□□□□ -0.66
RNU6-408P-201ENST00000515910 PIP4P2Q8N4L2 257 aa10.88□□□□□ -0.67
RNU6-408P-201ENST00000515910 SP7Q8TDD2 431 aaPredicted RBP10.88□□□□□ -0.67
RNU6-408P-201ENST00000515910 ZBTB22O15209 634 aa10.86□□□□□ -0.67
RNU6-408P-201ENST00000515910 PITPNM1O00562 1244 aa10.82□□□□□ -0.68
RNU6-408P-201ENST00000515910 HAX1O00165 279 aa10.79□□□□□ -0.68
RNU6-408P-201ENST00000515910 FXR2P51116 673 aaKnown RBP eCLIP10.76□□□□□ -0.69
RNU6-408P-201ENST00000515910 ATXN8OSP0DMR3 200 aa10.68□□□□□ -0.7
RNU6-408P-201ENST00000515910 EVX2Q03828 476 aa10.66□□□□□ -0.7
RNU6-408P-201ENST00000515910 FBLN2P98095 1184 aa10.65□□□□□ -0.7
RNU6-408P-201ENST00000515910 SPDYE2BA6NHP3 402 aa10.63□□□□□ -0.71
RNU6-408P-201ENST00000515910 SPDYE6P0CI01 402 aa10.63□□□□□ -0.71
RNU6-408P-201ENST00000515910 SPDYE2Q495Y8 402 aa10.63□□□□□ -0.71
RNU6-408P-201ENST00000515910 CLEC11AQ9Y240 323 aa10.6□□□□□ -0.71
RNU6-408P-201ENST00000515910 MKRN4PQ13434 485 aaPredicted RBP10.58□□□□□ -0.72
RNU6-408P-201ENST00000515910 PRKAR2AP13861 404 aaKnown RBP10.56□□□□□ -0.72
RNU6-408P-201ENST00000515910 ZNF692Q9BU19 519 aaPredicted RBP10.53□□□□□ -0.72
RNU6-408P-201ENST00000515910 SPDYE1Q8NFV5 336 aaPredicted RBP10.52□□□□□ -0.73
RNU6-408P-201ENST00000515910 SSUH2Q9Y2M2 353 aa10.46□□□□□ -0.73
RNU6-408P-201ENST00000515910 CHADLQ6NUI6 762 aa10.44□□□□□ -0.74
RNU6-408P-201ENST00000515910 C19orf67A6NJJ6 358 aa10.42□□□□□ -0.74
RNU6-408P-201ENST00000515910 PABPN1Q86U42 306 aaKnown RBP eCLIP10.37□□□□□ -0.75
RNU6-408P-201ENST00000515910 GABBR2O75899 941 aa10.36□□□□□ -0.75
RNU6-408P-201ENST00000515910 PRR29P0C7W0 189 aa10.35□□□□□ -0.75
RNU6-408P-201ENST00000515910 LHX8Q68G74 356 aa10.23□□□□□ -0.77
RNU6-408P-201ENST00000515910 CD44P16070 742 aaKnown RBP10.2□□□□□ -0.78
RNU6-408P-201ENST00000515910 FARP1Q9Y4F1 1045 aaPredicted RBP10.19□□□□□ -0.78
RNU6-408P-201ENST00000515910 POTEIP0CG38 1075 aa10.16□□□□□ -0.78
RNU6-408P-201ENST00000515910 CSRNP3Q8WYN3 585 aa10.15□□□□□ -0.78
RNU6-408P-201ENST00000515910 ZRANB1Q9UGI0 708 aa10.04□□□□□ -0.8
RNU6-408P-201ENST00000515910 CREBZFQ9NS37 354 aa10.03□□□□□ -0.8
RNU6-408P-201ENST00000515910 DCBLD2Q96PD2 775 aa10.02□□□□□ -0.81
RNU6-408P-201ENST00000515910 CLCN6P51797 869 aa9.99□□□□□ -0.81
RNU6-408P-201ENST00000515910 ZNF579Q8NAF0 562 aaKnown RBP9.98□□□□□ -0.81
RNU6-408P-201ENST00000515910 STAG3Q9UJ98 1225 aa9.97□□□□□ -0.81
RNU6-408P-201ENST00000515910 SPDYE4A6NLX3 237 aa9.95□□□□□ -0.82
RNU6-408P-201ENST00000515910 GALR2O43603 387 aaPredicted RBP9.95□□□□□ -0.82
RNU6-408P-201ENST00000515910 EHMT2Q96KQ7 1210 aa9.94□□□□□ -0.82
RNU6-408P-201ENST00000515910 PHF12Q96QT6 1004 aa9.89□□□□□ -0.83
RNU6-408P-201ENST00000515910 PAK3O75914 559 aaPredicted RBP9.85□□□□□ -0.83
RNU6-408P-201ENST00000515910 POTEB2H3BUK9 544 aa9.83□□□□□ -0.84
RNU6-408P-201ENST00000515910 OTUD5Q96G74 571 aa9.82□□□□□ -0.84
RNU6-408P-201ENST00000515910 PLSCR2Q9NRY7 297 aa9.82□□□□□ -0.84
RNU6-408P-201ENST00000515910 NPM1P06748 294 aaKnown RBP eCLIP9.81□□□□□ -0.84
RNU6-408P-201ENST00000515910 MNX1P50219 401 aaPredicted RBP9.81□□□□□ -0.84
RNU6-408P-201ENST00000515910 PELP1Q8IZL8 1130 aaKnown RBP9.79□□□□□ -0.84
RNU6-408P-201ENST00000515910 MS4A3Q96HJ5 214 aa9.73□□□□□ -0.85
RNU6-408P-201ENST00000515910 TSPYL2Q9H2G4 693 aaPredicted RBP9.7□□□□□ -0.86
RNU6-408P-201ENST00000515910 ATMINO43313 823 aaPredicted RBP9.67□□□□□ -0.86
RNU6-408P-201ENST00000515910 ASTLQ6HA08 431 aaPredicted RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms