RNA–Protein interactions for RNA: ENST00000515776.1

HMGCR-213, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 501 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-213ENST00000515776 AEBP2Q6ZN18 517 aaPredicted RBP20.59■□□□□ 0.89
HMGCR-213ENST00000515776 CHIC1Q5VXU3 224 aa19.58■□□□□ 0.72
HMGCR-213ENST00000515776 SENP3Q9H4L4 574 aaPredicted RBP17.52■□□□□ 0.4
HMGCR-213ENST00000515776 PHF23Q9BUL5 403 aaPredicted RBP17.35■□□□□ 0.37
HMGCR-213ENST00000515776 POTEDQ86YR6 584 aa17.02■□□□□ 0.32
HMGCR-213ENST00000515776 FOXD1Q16676 465 aa16.36■□□□□ 0.21
HMGCR-213ENST00000515776 PLPPR3Q6T4P5 718 aa15.66■□□□□ 0.1
HMGCR-213ENST00000515776 PPP6R1Q9UPN7 881 aa15.36■□□□□ 0.05
HMGCR-213ENST00000515776 ADRA2BP18089 450 aa15.31■□□□□ 0.04
HMGCR-213ENST00000515776 PIAS4Q8N2W9 510 aaPredicted RBP15.29■□□□□ 0.04
HMGCR-213ENST00000515776 MSH5O43196 834 aa15.26■□□□□ 0.03
HMGCR-213ENST00000515776 MAPK8IP2Q13387 824 aaPredicted RBP14.06□□□□□ -0.16
HMGCR-213ENST00000515776 SCAF1Q9H7N4 1312 aaKnown RBP13.97□□□□□ -0.17
HMGCR-213ENST00000515776 DMRT2Q9Y5R5 561 aa13.91□□□□□ -0.18
HMGCR-213ENST00000515776 PPP4R3CPQ6ZMV5 832 aa13.75□□□□□ -0.21
HMGCR-213ENST00000515776 CACNB1Q02641 598 aaPredicted RBP13.56□□□□□ -0.24
HMGCR-213ENST00000515776 CNKSR2Q8WXI2 1034 aa13.47□□□□□ -0.25
HMGCR-213ENST00000515776 HOXD11P31277 338 aaPredicted RBP13.41□□□□□ -0.26
HMGCR-213ENST00000515776 DCAF8L1A6NGE4 600 aa13.37□□□□□ -0.27
HMGCR-213ENST00000515776 RNF216Q9NWF9 866 aaPredicted RBP13.33□□□□□ -0.28
HMGCR-213ENST00000515776 NCBP3Q53F19 620 aaKnown RBP13.22□□□□□ -0.29
HMGCR-213ENST00000515776 NPM3O75607 178 aaKnown RBP13.05□□□□□ -0.32
HMGCR-213ENST00000515776 RNF39Q9H2S5 420 aa13.03□□□□□ -0.32
HMGCR-213ENST00000515776 POTEHQ6S545 545 aa13.01□□□□□ -0.33
HMGCR-213ENST00000515776 DNAJC5BQ9UF47 199 aa12.91□□□□□ -0.34
HMGCR-213ENST00000515776 KCNA4P22459 653 aa12.85□□□□□ -0.35
HMGCR-213ENST00000515776 C1QBPQ07021 282 aaKnown RBP12.84□□□□□ -0.35
HMGCR-213ENST00000515776 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.81□□□□□ -0.36
HMGCR-213ENST00000515776 U3KPZ7 1027 aaPredicted RBP12.54□□□□□ -0.4
HMGCR-213ENST00000515776 SLC4A2P04920 1241 aa12.46□□□□□ -0.41
HMGCR-213ENST00000515776 SPINK5Q9NQ38 1064 aaPredicted RBP12.36□□□□□ -0.43
HMGCR-213ENST00000515776 CAPN15O75808 1086 aa12.33□□□□□ -0.44
HMGCR-213ENST00000515776 DSG3P32926 999 aa12.23□□□□□ -0.45
HMGCR-213ENST00000515776 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.17□□□□□ -0.46
HMGCR-213ENST00000515776 HNRNPUL2Q1KMD3 747 aaKnown RBP12.17□□□□□ -0.46
HMGCR-213ENST00000515776 TRHP20396 242 aaPredicted RBP12.16□□□□□ -0.46
HMGCR-213ENST00000515776 APLP2Q06481 763 aa12.15□□□□□ -0.46
HMGCR-213ENST00000515776 SLC4A1APQ9BWU0 796 aaKnown RBP12.13□□□□□ -0.47
HMGCR-213ENST00000515776 SAMD1Q6SPF0 538 aaPredicted RBP12.11□□□□□ -0.47
HMGCR-213ENST00000515776 ZNF219Q9P2Y4 722 aaPredicted RBP12.08□□□□□ -0.48
HMGCR-213ENST00000515776 ABCB7O75027 752 aa12.06□□□□□ -0.48
HMGCR-213ENST00000515776 MYCNP04198 464 aaPredicted RBP12.04□□□□□ -0.48
HMGCR-213ENST00000515776 FOXD4L1Q9NU39 408 aa11.95□□□□□ -0.5
HMGCR-213ENST00000515776 POLA2Q14181 598 aa11.84□□□□□ -0.51
HMGCR-213ENST00000515776 ZBTB22O15209 634 aa11.81□□□□□ -0.52
HMGCR-213ENST00000515776 ATF5Q9Y2D1 282 aaPredicted RBP11.81□□□□□ -0.52
HMGCR-213ENST00000515776 RBM42Q9BTD8 480 aaKnown RBP11.64□□□□□ -0.55
HMGCR-213ENST00000515776 ATXN8OSP0DMR3 200 aa11.56□□□□□ -0.56
HMGCR-213ENST00000515776 ZBTB12Q9Y330 459 aaPredicted RBP11.54□□□□□ -0.56
HMGCR-213ENST00000515776 SP7Q8TDD2 431 aaPredicted RBP11.45□□□□□ -0.58
HMGCR-213ENST00000515776 OSCARQ8IYS5 282 aa11.44□□□□□ -0.58
HMGCR-213ENST00000515776 PLSCR2Q9NRY7 297 aa11.41□□□□□ -0.58
HMGCR-213ENST00000515776 AKT1S1Q96B36 256 aa11.4□□□□□ -0.58
HMGCR-213ENST00000515776 CHRDL2Q6WN34 429 aa11.39□□□□□ -0.59
HMGCR-213ENST00000515776 CSRNP3Q8WYN3 585 aa11.32□□□□□ -0.6
HMGCR-213ENST00000515776 FBLN2P98095 1184 aa11.31□□□□□ -0.6
HMGCR-213ENST00000515776 REM2Q8IYK8 340 aaPredicted RBP11.31□□□□□ -0.6
HMGCR-213ENST00000515776 MKRN4PQ13434 485 aaPredicted RBP11.25□□□□□ -0.61
HMGCR-213ENST00000515776 SPDYE2BA6NHP3 402 aa11.21□□□□□ -0.61
HMGCR-213ENST00000515776 SPDYE6P0CI01 402 aa11.21□□□□□ -0.61
HMGCR-213ENST00000515776 SPDYE2Q495Y8 402 aa11.21□□□□□ -0.61
HMGCR-213ENST00000515776 EHMT2Q96KQ7 1210 aa11.21□□□□□ -0.61
HMGCR-213ENST00000515776 PITPNM1O00562 1244 aa11.18□□□□□ -0.62
HMGCR-213ENST00000515776 PIP4P2Q8N4L2 257 aa11.14□□□□□ -0.63
HMGCR-213ENST00000515776 ZNF692Q9BU19 519 aaPredicted RBP11.12□□□□□ -0.63
HMGCR-213ENST00000515776 FXR2P51116 673 aaKnown RBP eCLIP11.08□□□□□ -0.645e-6■□□□□ 9.5
HMGCR-213ENST00000515776 SSUH2Q9Y2M2 353 aa11.06□□□□□ -0.64
HMGCR-213ENST00000515776 CLEC11AQ9Y240 323 aa11.02□□□□□ -0.65
HMGCR-213ENST00000515776 SPDYE1Q8NFV5 336 aaPredicted RBP11.01□□□□□ -0.65
HMGCR-213ENST00000515776 HAX1O00165 279 aa10.95□□□□□ -0.66
HMGCR-213ENST00000515776 PABPN1Q86U42 306 aaKnown RBP eCLIP10.95□□□□□ -0.66
HMGCR-213ENST00000515776 PRKAR2AP13861 404 aaKnown RBP10.9□□□□□ -0.66
HMGCR-213ENST00000515776 PRR29P0C7W0 189 aa10.84□□□□□ -0.67
HMGCR-213ENST00000515776 EVX2Q03828 476 aa10.83□□□□□ -0.68
HMGCR-213ENST00000515776 CHADLQ6NUI6 762 aa10.81□□□□□ -0.68
HMGCR-213ENST00000515776 SPDYE4A6NLX3 237 aa10.74□□□□□ -0.69
HMGCR-213ENST00000515776 LHX8Q68G74 356 aa10.74□□□□□ -0.69
HMGCR-213ENST00000515776 C19orf67A6NJJ6 358 aa10.72□□□□□ -0.69
HMGCR-213ENST00000515776 FARP1Q9Y4F1 1045 aaPredicted RBP10.64□□□□□ -0.71
HMGCR-213ENST00000515776 STAG3Q9UJ98 1225 aa10.63□□□□□ -0.71
HMGCR-213ENST00000515776 CREBZFQ9NS37 354 aa10.58□□□□□ -0.72
HMGCR-213ENST00000515776 GABBR2O75899 941 aa10.57□□□□□ -0.72
HMGCR-213ENST00000515776 CD44P16070 742 aaKnown RBP10.55□□□□□ -0.72
HMGCR-213ENST00000515776 PROM2Q8N271 834 aa10.46□□□□□ -0.73
HMGCR-213ENST00000515776 ZRANB1Q9UGI0 708 aa10.43□□□□□ -0.74
HMGCR-213ENST00000515776 MNX1P50219 401 aaPredicted RBP10.39□□□□□ -0.75
HMGCR-213ENST00000515776 NPM1P06748 294 aaKnown RBP eCLIP10.37□□□□□ -0.75
HMGCR-213ENST00000515776 CLCN6P51797 869 aa10.37□□□□□ -0.75
HMGCR-213ENST00000515776 ZNF579Q8NAF0 562 aaKnown RBP10.37□□□□□ -0.75
HMGCR-213ENST00000515776 POTEIP0CG38 1075 aa10.34□□□□□ -0.75
HMGCR-213ENST00000515776 PAK3O75914 559 aaPredicted RBP10.33□□□□□ -0.76
HMGCR-213ENST00000515776 DCBLD2Q96PD2 775 aa10.29□□□□□ -0.76
HMGCR-213ENST00000515776 PHF12Q96QT6 1004 aa10.29□□□□□ -0.76
HMGCR-213ENST00000515776 GALR2O43603 387 aaPredicted RBP10.28□□□□□ -0.76
HMGCR-213ENST00000515776 FKBP8Q14318 412 aa10.27□□□□□ -0.77
HMGCR-213ENST00000515776 MIER1Q8N108 512 aa10.27□□□□□ -0.77
HMGCR-213ENST00000515776 PLEKHG5O94827 1062 aa10.21□□□□□ -0.77
HMGCR-213ENST00000515776 TSPYL2Q9H2G4 693 aaPredicted RBP10.21□□□□□ -0.77
HMGCR-213ENST00000515776 POTEMA6NI47 508 aa10.2□□□□□ -0.78
HMGCR-213ENST00000515776 PLCD3Q8N3E9 789 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms