RNA–Protein interactions for RNA: ENST00000515728.1

LINC01216-201, Transcript of long intergenic non-protein coding RNA 1216, humanhuman

TSL 5 BASIC

Gene LINC01216, Length 824 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01216-201ENST00000515728 AEBP2Q6ZN18 517 aaPredicted RBP33.72■■■□□ 2.99
LINC01216-201ENST00000515728 CHIC1Q5VXU3 224 aa32.25■■■□□ 2.75
LINC01216-201ENST00000515728 SENP3Q9H4L4 574 aaPredicted RBP29.08■■■□□ 2.25
LINC01216-201ENST00000515728 PHF23Q9BUL5 403 aaPredicted RBP28.6■■■□□ 2.17
LINC01216-201ENST00000515728 FOXD1Q16676 465 aa26.9■■□□□ 1.9
LINC01216-201ENST00000515728 PLPPR3Q6T4P5 718 aa25.92■■□□□ 1.74
LINC01216-201ENST00000515728 MSH5O43196 834 aa25.41■■□□□ 1.66
LINC01216-201ENST00000515728 PIAS4Q8N2W9 510 aaPredicted RBP25.27■■□□□ 1.64
LINC01216-201ENST00000515728 ADRA2BP18089 450 aa25.08■■□□□ 1.61
LINC01216-201ENST00000515728 PPP6R1Q9UPN7 881 aa25.08■■□□□ 1.61
LINC01216-201ENST00000515728 POTEDQ86YR6 584 aa24.51■■□□□ 1.51
LINC01216-201ENST00000515728 SCAF1Q9H7N4 1312 aaKnown RBP23.33■■□□□ 1.33
LINC01216-201ENST00000515728 MAPK8IP2Q13387 824 aaPredicted RBP22.98■■□□□ 1.27
LINC01216-201ENST00000515728 DMRT2Q9Y5R5 561 aa22.97■■□□□ 1.27
LINC01216-201ENST00000515728 PPP4R3CPQ6ZMV5 832 aa22.64■■□□□ 1.21
LINC01216-201ENST00000515728 CNKSR2Q8WXI2 1034 aa22.29■■□□□ 1.16
LINC01216-201ENST00000515728 DCAF8L1A6NGE4 600 aa22.15■■□□□ 1.14
LINC01216-201ENST00000515728 HOXD11P31277 338 aaPredicted RBP22.14■■□□□ 1.13
LINC01216-201ENST00000515728 RNF216Q9NWF9 866 aaPredicted RBP22.06■■□□□ 1.12
LINC01216-201ENST00000515728 NCBP3Q53F19 620 aaKnown RBP22.01■■□□□ 1.11
LINC01216-201ENST00000515728 CACNB1Q02641 598 aaPredicted RBP21.76■■□□□ 1.07
LINC01216-201ENST00000515728 RNF39Q9H2S5 420 aa21.53■■□□□ 1.04
LINC01216-201ENST00000515728 DNAJC5BQ9UF47 199 aa21.51■■□□□ 1.03
LINC01216-201ENST00000515728 NPM3O75607 178 aaKnown RBP21.39■■□□□ 1.01
LINC01216-201ENST00000515728 C1QBPQ07021 282 aaKnown RBP21.36■■□□□ 1.01
LINC01216-201ENST00000515728 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.24■□□□□ 0.99
LINC01216-201ENST00000515728 KCNA4P22459 653 aa20.97■□□□□ 0.95
LINC01216-201ENST00000515728 U3KPZ7 1027 aaPredicted RBP20.59■□□□□ 0.89
LINC01216-201ENST00000515728 APLP2Q06481 763 aa20.45■□□□□ 0.86
LINC01216-201ENST00000515728 CAPN15O75808 1086 aa20.42■□□□□ 0.86
LINC01216-201ENST00000515728 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.37■□□□□ 0.85
LINC01216-201ENST00000515728 HNRNPUL2Q1KMD3 747 aaKnown RBP20.37■□□□□ 0.85
LINC01216-201ENST00000515728 SLC4A2P04920 1241 aa20.34■□□□□ 0.85
LINC01216-201ENST00000515728 SPINK5Q9NQ38 1064 aaPredicted RBP20.25■□□□□ 0.83
LINC01216-201ENST00000515728 DSG3P32926 999 aa20.16■□□□□ 0.82
LINC01216-201ENST00000515728 SAMD1Q6SPF0 538 aaPredicted RBP20.16■□□□□ 0.82
LINC01216-201ENST00000515728 ZNF219Q9P2Y4 722 aaPredicted RBP20.13■□□□□ 0.81
LINC01216-201ENST00000515728 TRHP20396 242 aaPredicted RBP20.07■□□□□ 0.8
LINC01216-201ENST00000515728 SLC4A1APQ9BWU0 796 aaKnown RBP19.96■□□□□ 0.79
LINC01216-201ENST00000515728 MYCNP04198 464 aaPredicted RBP19.93■□□□□ 0.78
LINC01216-201ENST00000515728 ABCB7O75027 752 aa19.81■□□□□ 0.76
LINC01216-201ENST00000515728 FOXD4L1Q9NU39 408 aa19.7■□□□□ 0.74
LINC01216-201ENST00000515728 POLA2Q14181 598 aa19.51■□□□□ 0.71
LINC01216-201ENST00000515728 RBM42Q9BTD8 480 aaKnown RBP19.48■□□□□ 0.71
LINC01216-201ENST00000515728 ZBTB12Q9Y330 459 aaPredicted RBP19.33■□□□□ 0.68
LINC01216-201ENST00000515728 POTEHQ6S545 545 aa19.29■□□□□ 0.68
LINC01216-201ENST00000515728 ATXN8OSP0DMR3 200 aa19.2■□□□□ 0.66
LINC01216-201ENST00000515728 ATF5Q9Y2D1 282 aaPredicted RBP19.19■□□□□ 0.66
LINC01216-201ENST00000515728 ZBTB22O15209 634 aa19.14■□□□□ 0.65
LINC01216-201ENST00000515728 AKT1S1Q96B36 256 aa18.95■□□□□ 0.62
LINC01216-201ENST00000515728 CHRDL2Q6WN34 429 aa18.87■□□□□ 0.61
LINC01216-201ENST00000515728 FBLN2P98095 1184 aa18.84■□□□□ 0.61
LINC01216-201ENST00000515728 OSCARQ8IYS5 282 aa18.8■□□□□ 0.6
LINC01216-201ENST00000515728 REM2Q8IYK8 340 aaPredicted RBP18.68■□□□□ 0.58
LINC01216-201ENST00000515728 SPDYE2BA6NHP3 402 aa18.61■□□□□ 0.57
LINC01216-201ENST00000515728 SPDYE6P0CI01 402 aa18.61■□□□□ 0.57
LINC01216-201ENST00000515728 SPDYE2Q495Y8 402 aa18.61■□□□□ 0.57
LINC01216-201ENST00000515728 PITPNM1O00562 1244 aa18.42■□□□□ 0.54
LINC01216-201ENST00000515728 CSRNP3Q8WYN3 585 aa18.41■□□□□ 0.54
LINC01216-201ENST00000515728 ZNF692Q9BU19 519 aaPredicted RBP18.4■□□□□ 0.54
LINC01216-201ENST00000515728 PIP4P2Q8N4L2 257 aa18.36■□□□□ 0.53
LINC01216-201ENST00000515728 MKRN4PQ13434 485 aaPredicted RBP18.34■□□□□ 0.53
LINC01216-201ENST00000515728 SPDYE1Q8NFV5 336 aaPredicted RBP18.32■□□□□ 0.52
LINC01216-201ENST00000515728 FXR2P51116 673 aaKnown RBP eCLIP18.28■□□□□ 0.52
LINC01216-201ENST00000515728 EHMT2Q96KQ7 1210 aa18.26■□□□□ 0.51
LINC01216-201ENST00000515728 CLEC11AQ9Y240 323 aa18.24■□□□□ 0.51
LINC01216-201ENST00000515728 SSUH2Q9Y2M2 353 aa18.23■□□□□ 0.51
LINC01216-201ENST00000515728 HAX1O00165 279 aa18.17■□□□□ 0.5
LINC01216-201ENST00000515728 SP7Q8TDD2 431 aaPredicted RBP18.12■□□□□ 0.49
LINC01216-201ENST00000515728 PABPN1Q86U42 306 aaKnown RBP eCLIP18.06■□□□□ 0.48
LINC01216-201ENST00000515728 PRKAR2AP13861 404 aaKnown RBP18.03■□□□□ 0.48
LINC01216-201ENST00000515728 PRR29P0C7W0 189 aa17.99■□□□□ 0.47
LINC01216-201ENST00000515728 STAG3Q9UJ98 1225 aa17.78■□□□□ 0.44
LINC01216-201ENST00000515728 CHADLQ6NUI6 762 aa17.72■□□□□ 0.43
LINC01216-201ENST00000515728 SPDYE4A6NLX3 237 aa17.71■□□□□ 0.43
LINC01216-201ENST00000515728 C19orf67A6NJJ6 358 aa17.7■□□□□ 0.42
LINC01216-201ENST00000515728 EVX2Q03828 476 aa17.64■□□□□ 0.41
LINC01216-201ENST00000515728 FARP1Q9Y4F1 1045 aaPredicted RBP17.58■□□□□ 0.4
LINC01216-201ENST00000515728 CLCN6P51797 869 aa17.48■□□□□ 0.39
LINC01216-201ENST00000515728 CD44P16070 742 aaKnown RBP17.47■□□□□ 0.39
LINC01216-201ENST00000515728 GABBR2O75899 941 aa17.44■□□□□ 0.38
LINC01216-201ENST00000515728 CREBZFQ9NS37 354 aa17.36■□□□□ 0.37
LINC01216-201ENST00000515728 NPM1P06748 294 aaKnown RBP eCLIP17.33■□□□□ 0.36
LINC01216-201ENST00000515728 PAK3O75914 559 aaPredicted RBP17.31■□□□□ 0.36
LINC01216-201ENST00000515728 ZRANB1Q9UGI0 708 aa17.24■□□□□ 0.35
LINC01216-201ENST00000515728 ZNF579Q8NAF0 562 aaKnown RBP17.18■□□□□ 0.34
LINC01216-201ENST00000515728 PLEKHG5O94827 1062 aa17.17■□□□□ 0.34
LINC01216-201ENST00000515728 DCBLD2Q96PD2 775 aa17.15■□□□□ 0.34
LINC01216-201ENST00000515728 PROM2Q8N271 834 aa17.14■□□□□ 0.33
LINC01216-201ENST00000515728 LHX8Q68G74 356 aa17.02■□□□□ 0.32
LINC01216-201ENST00000515728 MNX1P50219 401 aaPredicted RBP16.99■□□□□ 0.31
LINC01216-201ENST00000515728 MIER1Q8N108 512 aa16.98■□□□□ 0.31
LINC01216-201ENST00000515728 POTEIP0CG38 1075 aa16.91■□□□□ 0.3
LINC01216-201ENST00000515728 PHF12Q96QT6 1004 aa16.89■□□□□ 0.29
LINC01216-201ENST00000515728 GALR2O43603 387 aaPredicted RBP16.87■□□□□ 0.29
LINC01216-201ENST00000515728 PLCD3Q8N3E9 789 aa16.87■□□□□ 0.29
LINC01216-201ENST00000515728 ZBTB47Q9UFB7 747 aaPredicted RBP16.87■□□□□ 0.29
LINC01216-201ENST00000515728 TSPYL2Q9H2G4 693 aaPredicted RBP16.83■□□□□ 0.28
LINC01216-201ENST00000515728 FKBP8Q14318 412 aa16.81■□□□□ 0.28
LINC01216-201ENST00000515728 FBXO3Q9UK99 471 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms