RNA–Protein interactions for RNA: ENST00000515708.5

TSPAN17-209, Transcript of tetraspanin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN17, Length 2,361 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-209ENST00000515708 NISCHQ9Y2I1 1504 aa34.34■■■■□ 3.09
TSPAN17-209ENST00000515708 SHROOM4Q9ULL8 1493 aa29.39■■■□□ 2.3
TSPAN17-209ENST00000515708 ZCCHC6Q5VYS8 1495 aaKnown RBP29.11■■■□□ 2.25
TSPAN17-209ENST00000515708 CCDC180Q9P1Z9 1646 aa29.11■■■□□ 2.25
TSPAN17-209ENST00000515708 SUPT5HO00267 1087 aaKnown RBP28.93■■■□□ 2.22
TSPAN17-209ENST00000515708 DCAF8L2P0C7V8 631 aa28.31■■■□□ 2.12
TSPAN17-209ENST00000515708 CHIC1Q5VXU3 224 aa28.29■■■□□ 2.12
TSPAN17-209ENST00000515708 MYO15BQ96JP2 1530 aa28.26■■■□□ 2.11
TSPAN17-209ENST00000515708 DCAF1Q9Y4B6 1507 aa28.21■■■□□ 2.11
TSPAN17-209ENST00000515708 HRCP23327 699 aa27.84■■■□□ 2.05
TSPAN17-209ENST00000515708 PCGF6Q9BYE7 350 aa27.63■■■□□ 2.01
TSPAN17-209ENST00000515708 ABCC9O60706 1549 aa27.53■■■□□ 2
TSPAN17-209ENST00000515708 LOC105371045A0A1W2PR82 267 aa27.43■■□□□ 1.98
TSPAN17-209ENST00000515708 SCRIBQ14160 1630 aa27.29■■□□□ 1.96
TSPAN17-209ENST00000515708 RSF1Q96T23 1441 aaPredicted RBP27.26■■□□□ 1.96
TSPAN17-209ENST00000515708 PPARGC1BQ86YN6 1023 aaKnown RBP27.17■■□□□ 1.94
TSPAN17-209ENST00000515708 TRIM26Q12899 539 aaPredicted RBP27.08■■□□□ 1.93
TSPAN17-209ENST00000515708 NACADO15069 1562 aa27.07■■□□□ 1.92
TSPAN17-209ENST00000515708 RB1CC1Q8TDY2 1594 aa27.03■■□□□ 1.92
TSPAN17-209ENST00000515708 TRIM41Q8WV44 630 aa26.95■■□□□ 1.9
TSPAN17-209ENST00000515708 CECR2Q9BXF3 1484 aa26.76■■□□□ 1.87
TSPAN17-209ENST00000515708 FAM9AQ8IZU1 332 aaPredicted RBP26.71■■□□□ 1.87
TSPAN17-209ENST00000515708 MROH2BQ7Z745 1585 aa26.71■■□□□ 1.87
TSPAN17-209ENST00000515708 ZEB1P37275 1124 aaPredicted RBP26.6■■□□□ 1.85
TSPAN17-209ENST00000515708 WIZO95785 1651 aa26.58■■□□□ 1.85
TSPAN17-209ENST00000515708 BAZ1AQ9NRL2 1556 aaPredicted RBP26.46■■□□□ 1.83
TSPAN17-209ENST00000515708 EHMT2Q96KQ7 1210 aa26.44■■□□□ 1.82
TSPAN17-209ENST00000515708 EIF4G1Q04637 1599 aaKnown RBP26.37■■□□□ 1.81
TSPAN17-209ENST00000515708 UNC13AQ9UPW8 1703 aa26.34■■□□□ 1.81
TSPAN17-209ENST00000515708 PABPN1Q86U42 306 aaKnown RBP eCLIP26.18■■□□□ 1.78
TSPAN17-209ENST00000515708 TOP2AP11388 1531 aaKnown RBP26.18■■□□□ 1.78
TSPAN17-209ENST00000515708 PELP1Q8IZL8 1130 aaKnown RBP26.17■■□□□ 1.78
TSPAN17-209ENST00000515708 SMARCA4P51532 1647 aa26.12■■□□□ 1.77
TSPAN17-209ENST00000515708 BICRAQ9NZM4 1560 aa26.09■■□□□ 1.77
TSPAN17-209ENST00000515708 ABCC8Q09428 1581 aa26.07■■□□□ 1.76
TSPAN17-209ENST00000515708 CCDC88BA6NC98 1476 aa26.06■■□□□ 1.76
TSPAN17-209ENST00000515708 SMARCA2P51531 1590 aa26.04■■□□□ 1.76
TSPAN17-209ENST00000515708 WRNQ14191 1432 aaPredicted RBP eCLIP25.94■■□□□ 1.74
TSPAN17-209ENST00000515708 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.92■■□□□ 1.74
TSPAN17-209ENST00000515708 CEP162Q5TB80 1403 aa25.88■■□□□ 1.73
TSPAN17-209ENST00000515708 CCER1Q8TC90 406 aaPredicted RBP25.87■■□□□ 1.73
TSPAN17-209ENST00000515708 SOGA1O94964 1423 aa25.86■■□□□ 1.73
TSPAN17-209ENST00000515708 TNIKQ9UKE5 1360 aa25.82■■□□□ 1.72
TSPAN17-209ENST00000515708 EEA1Q15075 1411 aa25.8■■□□□ 1.72
TSPAN17-209ENST00000515708 SCAF1Q9H7N4 1312 aaKnown RBP25.78■■□□□ 1.72
TSPAN17-209ENST00000515708 CSRNP3Q8WYN3 585 aa25.73■■□□□ 1.71
TSPAN17-209ENST00000515708 RUSC2Q8N2Y8 1516 aa25.72■■□□□ 1.71
TSPAN17-209ENST00000515708 TTBK1Q5TCY1 1321 aaPredicted RBP25.67■■□□□ 1.7
TSPAN17-209ENST00000515708 GOLGA3Q08378 1498 aa25.63■■□□□ 1.69
TSPAN17-209ENST00000515708 UBTFP17480 764 aaKnown RBP25.63■■□□□ 1.69
TSPAN17-209ENST00000515708 PEG3Q9GZU2 1588 aa25.62■■□□□ 1.69
TSPAN17-209ENST00000515708 DIEXFQ68CQ4 756 aaKnown RBP25.52■■□□□ 1.68
TSPAN17-209ENST00000515708 SYNJ1O43426 1573 aa25.48■■□□□ 1.67
TSPAN17-209ENST00000515708 ACIN1Q9UKV3 1341 aaKnown RBP25.47■■□□□ 1.67
TSPAN17-209ENST00000515708 CEP164Q9UPV0 1460 aa25.46■■□□□ 1.67
TSPAN17-209ENST00000515708 KIF21BO75037 1637 aa25.45■■□□□ 1.67
TSPAN17-209ENST00000515708 ATAD2BQ9ULI0 1458 aa25.43■■□□□ 1.66
TSPAN17-209ENST00000515708 NEUROD1Q13562 356 aa25.4■■□□□ 1.66
TSPAN17-209ENST00000515708 MYT1Q01538 1121 aa25.39■■□□□ 1.66
TSPAN17-209ENST00000515708 CLIP1P30622 1438 aa25.34■■□□□ 1.65
TSPAN17-209ENST00000515708 BAZ1BQ9UIG0 1483 aaKnown RBP25.31■■□□□ 1.64
TSPAN17-209ENST00000515708 CENPBP07199 599 aaPredicted RBP25.29■■□□□ 1.64
TSPAN17-209ENST00000515708 VPS8Q8N3P4 1428 aa25.28■■□□□ 1.64
TSPAN17-209ENST00000515708 ZNF316A6NFI3 1004 aaPredicted RBP25.27■■□□□ 1.64
TSPAN17-209ENST00000515708 RAPGEF2Q9Y4G8 1499 aa25.24■■□□□ 1.63
TSPAN17-209ENST00000515708 HNRNPUL2Q1KMD3 747 aaKnown RBP25.19■■□□□ 1.62
TSPAN17-209ENST00000515708 TOP2BQ02880 1626 aa25.16■■□□□ 1.62
TSPAN17-209ENST00000515708 GTF3C3Q9Y5Q9 886 aa25.16■■□□□ 1.62
TSPAN17-209ENST00000515708 APLP2Q06481 763 aa25.11■■□□□ 1.61
TSPAN17-209ENST00000515708 NCAPD3P42695 1498 aa25.08■■□□□ 1.61
TSPAN17-209ENST00000515708 BIVM-ERCC5R4GMW8 1640 aa25.07■■□□□ 1.6
TSPAN17-209ENST00000515708 RANGAP1P46060 587 aaPredicted RBP25.02■■□□□ 1.6
TSPAN17-209ENST00000515708 ERICH3Q5RHP9 1530 aa25■■□□□ 1.59
TSPAN17-209ENST00000515708 HMGXB3Q12766 1538 aa25■■□□□ 1.59
TSPAN17-209ENST00000515708 PRXQ9BXM0 1461 aa24.98■■□□□ 1.59
TSPAN17-209ENST00000515708 MIER1Q8N108 512 aa24.93■■□□□ 1.58
TSPAN17-209ENST00000515708 ARAP1Q96P48 1450 aa24.91■■□□□ 1.58
TSPAN17-209ENST00000515708 YTHDC1Q96MU7 727 aaKnown RBP24.89■■□□□ 1.57
TSPAN17-209ENST00000515708 CUX1P39880 1505 aa24.85■■□□□ 1.57
TSPAN17-209ENST00000515708 CLSPNQ9HAW4 1339 aa24.84■■□□□ 1.57
TSPAN17-209ENST00000515708 CC2D2AQ9P2K1 1620 aa24.8■■□□□ 1.56
TSPAN17-209ENST00000515708 DHX57Q6P158 1386 aaKnown RBP24.8■■□□□ 1.56
TSPAN17-209ENST00000515708 KIF27Q86VH2 1401 aa24.79■■□□□ 1.56
TSPAN17-209ENST00000515708 KANK4Q5T7N3 995 aaPredicted RBP24.78■■□□□ 1.56
TSPAN17-209ENST00000515708 RRBP1Q9P2E9 1410 aaKnown RBP24.73■■□□□ 1.55
TSPAN17-209ENST00000515708 CFTRP13569 1480 aa24.72■■□□□ 1.55
TSPAN17-209ENST00000515708 ARHGAP35Q9NRY4 1499 aa24.66■■□□□ 1.54
TSPAN17-209ENST00000515708 CUX2O14529 1486 aa24.64■■□□□ 1.53
TSPAN17-209ENST00000515708 CCNB3Q8WWL7 1395 aa24.6■■□□□ 1.53
TSPAN17-209ENST00000515708 PRDM2Q13029 1718 aa24.55■■□□□ 1.52
TSPAN17-209ENST00000515708 CADPSQ9ULU8 1353 aa24.53■■□□□ 1.52
TSPAN17-209ENST00000515708 IGF1RP08069 1367 aa24.49■■□□□ 1.51
TSPAN17-209ENST00000515708 MAP3K1Q13233 1512 aa24.45■■□□□ 1.5
TSPAN17-209ENST00000515708 TIAM1Q13009 1591 aa24.45■■□□□ 1.5
TSPAN17-209ENST00000515708 DNAJC5BQ9UF47 199 aa24.43■■□□□ 1.5
TSPAN17-209ENST00000515708 ITGAEP38570 1179 aa24.42■■□□□ 1.5
TSPAN17-209ENST00000515708 RAB3GAP2Q9H2M9 1393 aa24.39■■□□□ 1.5
TSPAN17-209ENST00000515708 CARMIL1Q5VZK9 1371 aa24.39■■□□□ 1.49
TSPAN17-209ENST00000515708 MAPKBP1O60336 1514 aa24.36■■□□□ 1.49
TSPAN17-209ENST00000515708 FGD5Q6ZNL6 1462 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms