RNA–Protein interactions for RNA: ENST00000515181.1

LINC02353-201, Transcript of long intergenic non-protein coding RNA 2353, humanhuman

TSL 1 (best) BASIC

Gene LINC02353, Length 849 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02353-201ENST00000515181 AEBP2Q6ZN18 517 aaPredicted RBP31.34■■■□□ 2.61
LINC02353-201ENST00000515181 CHIC1Q5VXU3 224 aa29.32■■■□□ 2.28
LINC02353-201ENST00000515181 SENP3Q9H4L4 574 aaPredicted RBP26.77■■□□□ 1.88
LINC02353-201ENST00000515181 PHF23Q9BUL5 403 aaPredicted RBP26.35■■□□□ 1.81
LINC02353-201ENST00000515181 FOXD1Q16676 465 aa25.02■■□□□ 1.6
LINC02353-201ENST00000515181 POTEDQ86YR6 584 aa23.76■■□□□ 1.39
LINC02353-201ENST00000515181 MSH5O43196 834 aa23.57■■□□□ 1.36
LINC02353-201ENST00000515181 PIAS4Q8N2W9 510 aaPredicted RBP23.29■■□□□ 1.32
LINC02353-201ENST00000515181 PLPPR3Q6T4P5 718 aa23.22■■□□□ 1.31
LINC02353-201ENST00000515181 PPP6R1Q9UPN7 881 aa23.06■■□□□ 1.28
LINC02353-201ENST00000515181 ADRA2BP18089 450 aa22.96■■□□□ 1.27
LINC02353-201ENST00000515181 MAPK8IP2Q13387 824 aaPredicted RBP21.22■□□□□ 0.99
LINC02353-201ENST00000515181 DMRT2Q9Y5R5 561 aa21.17■□□□□ 0.98
LINC02353-201ENST00000515181 SCAF1Q9H7N4 1312 aaKnown RBP20.96■□□□□ 0.95
LINC02353-201ENST00000515181 CACNB1Q02641 598 aaPredicted RBP20.49■□□□□ 0.87
LINC02353-201ENST00000515181 DCAF8L1A6NGE4 600 aa20.35■□□□□ 0.85
LINC02353-201ENST00000515181 PPP4R3CPQ6ZMV5 832 aa20.3■□□□□ 0.84
LINC02353-201ENST00000515181 HOXD11P31277 338 aaPredicted RBP20.21■□□□□ 0.83
LINC02353-201ENST00000515181 RNF39Q9H2S5 420 aa20.08■□□□□ 0.81
LINC02353-201ENST00000515181 CNKSR2Q8WXI2 1034 aa20.01■□□□□ 0.79
LINC02353-201ENST00000515181 RNF216Q9NWF9 866 aaPredicted RBP19.94■□□□□ 0.78
LINC02353-201ENST00000515181 C1QBPQ07021 282 aaKnown RBP19.73■□□□□ 0.75
LINC02353-201ENST00000515181 DNAJC5BQ9UF47 199 aa19.56■□□□□ 0.72
LINC02353-201ENST00000515181 NCBP3Q53F19 620 aaKnown RBP19.36■□□□□ 0.69
LINC02353-201ENST00000515181 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.26■□□□□ 0.67
LINC02353-201ENST00000515181 NPM3O75607 178 aaKnown RBP19.13■□□□□ 0.65
LINC02353-201ENST00000515181 U3KPZ7 1027 aaPredicted RBP18.83■□□□□ 0.6
LINC02353-201ENST00000515181 SPINK5Q9NQ38 1064 aaPredicted RBP18.69■□□□□ 0.58
LINC02353-201ENST00000515181 CAPN15O75808 1086 aa18.67■□□□□ 0.58
LINC02353-201ENST00000515181 DSG3P32926 999 aa18.66■□□□□ 0.58
LINC02353-201ENST00000515181 POTEHQ6S545 545 aa18.53■□□□□ 0.56
LINC02353-201ENST00000515181 KCNA4P22459 653 aa18.39■□□□□ 0.53
LINC02353-201ENST00000515181 SLC4A2P04920 1241 aa18.38■□□□□ 0.53
LINC02353-201ENST00000515181 TRHP20396 242 aaPredicted RBP18.27■□□□□ 0.52
LINC02353-201ENST00000515181 ABCB7O75027 752 aa18.23■□□□□ 0.51
LINC02353-201ENST00000515181 APLP2Q06481 763 aa18.21■□□□□ 0.51
LINC02353-201ENST00000515181 ZNF219Q9P2Y4 722 aaPredicted RBP18.21■□□□□ 0.51
LINC02353-201ENST00000515181 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.1■□□□□ 0.49
LINC02353-201ENST00000515181 HNRNPUL2Q1KMD3 747 aaKnown RBP18.1■□□□□ 0.49
LINC02353-201ENST00000515181 SAMD1Q6SPF0 538 aaPredicted RBP18■□□□□ 0.47
LINC02353-201ENST00000515181 RBM42Q9BTD8 480 aaKnown RBP17.8■□□□□ 0.44
LINC02353-201ENST00000515181 MYCNP04198 464 aaPredicted RBP17.69■□□□□ 0.42
LINC02353-201ENST00000515181 POLA2Q14181 598 aa17.66■□□□□ 0.42
LINC02353-201ENST00000515181 CHRDL2Q6WN34 429 aa17.6■□□□□ 0.41
LINC02353-201ENST00000515181 ATF5Q9Y2D1 282 aaPredicted RBP17.34■□□□□ 0.37
LINC02353-201ENST00000515181 AKT1S1Q96B36 256 aa17.29■□□□□ 0.36
LINC02353-201ENST00000515181 FOXD4L1Q9NU39 408 aa17.29■□□□□ 0.36
LINC02353-201ENST00000515181 ZBTB12Q9Y330 459 aaPredicted RBP17.27■□□□□ 0.36
LINC02353-201ENST00000515181 SLC4A1APQ9BWU0 796 aaKnown RBP17.26■□□□□ 0.35
LINC02353-201ENST00000515181 OSCARQ8IYS5 282 aa17.17■□□□□ 0.34
LINC02353-201ENST00000515181 SP7Q8TDD2 431 aaPredicted RBP17.17■□□□□ 0.34
LINC02353-201ENST00000515181 REM2Q8IYK8 340 aaPredicted RBP17.14■□□□□ 0.33
LINC02353-201ENST00000515181 PIP4P2Q8N4L2 257 aa17.09■□□□□ 0.33
LINC02353-201ENST00000515181 PITPNM1O00562 1244 aa17■□□□□ 0.31
LINC02353-201ENST00000515181 ZBTB22O15209 634 aa16.92■□□□□ 0.3
LINC02353-201ENST00000515181 FXR2P51116 673 aaKnown RBP eCLIP16.9■□□□□ 0.3
LINC02353-201ENST00000515181 HAX1O00165 279 aa16.88■□□□□ 0.29
LINC02353-201ENST00000515181 ATXN8OSP0DMR3 200 aa16.75■□□□□ 0.27
LINC02353-201ENST00000515181 SPDYE2BA6NHP3 402 aa16.7■□□□□ 0.26
LINC02353-201ENST00000515181 SPDYE6P0CI01 402 aa16.7■□□□□ 0.26
LINC02353-201ENST00000515181 SPDYE2Q495Y8 402 aa16.7■□□□□ 0.26
LINC02353-201ENST00000515181 FBLN2P98095 1184 aa16.66■□□□□ 0.26
LINC02353-201ENST00000515181 EVX2Q03828 476 aa16.66■□□□□ 0.26
LINC02353-201ENST00000515181 PRKAR2AP13861 404 aaKnown RBP16.54■□□□□ 0.24
LINC02353-201ENST00000515181 CLEC11AQ9Y240 323 aa16.53■□□□□ 0.24
LINC02353-201ENST00000515181 MKRN4PQ13434 485 aaPredicted RBP16.52■□□□□ 0.24
LINC02353-201ENST00000515181 SPDYE1Q8NFV5 336 aaPredicted RBP16.52■□□□□ 0.24
LINC02353-201ENST00000515181 SSUH2Q9Y2M2 353 aa16.45■□□□□ 0.22
LINC02353-201ENST00000515181 ZNF692Q9BU19 519 aaPredicted RBP16.43■□□□□ 0.22
LINC02353-201ENST00000515181 C19orf67A6NJJ6 358 aa16.38■□□□□ 0.21
LINC02353-201ENST00000515181 CHADLQ6NUI6 762 aa16.28■□□□□ 0.2
LINC02353-201ENST00000515181 GABBR2O75899 941 aa16.25■□□□□ 0.19
LINC02353-201ENST00000515181 PABPN1Q86U42 306 aaKnown RBP eCLIP16.19■□□□□ 0.18
LINC02353-201ENST00000515181 PRR29P0C7W0 189 aa16.17■□□□□ 0.18
LINC02353-201ENST00000515181 LHX8Q68G74 356 aa16.08■□□□□ 0.16
LINC02353-201ENST00000515181 CD44P16070 742 aaKnown RBP16■□□□□ 0.15
LINC02353-201ENST00000515181 FARP1Q9Y4F1 1045 aaPredicted RBP15.96■□□□□ 0.15
LINC02353-201ENST00000515181 POTEIP0CG38 1075 aa15.92■□□□□ 0.14
LINC02353-201ENST00000515181 CLCN6P51797 869 aa15.78■□□□□ 0.12
LINC02353-201ENST00000515181 ZNF579Q8NAF0 562 aaKnown RBP15.73■□□□□ 0.11
LINC02353-201ENST00000515181 CSRNP3Q8WYN3 585 aa15.71■□□□□ 0.11
LINC02353-201ENST00000515181 DCBLD2Q96PD2 775 aa15.71■□□□□ 0.11
LINC02353-201ENST00000515181 ZRANB1Q9UGI0 708 aa15.7■□□□□ 0.1
LINC02353-201ENST00000515181 CREBZFQ9NS37 354 aa15.69■□□□□ 0.1
LINC02353-201ENST00000515181 STAG3Q9UJ98 1225 aa15.61■□□□□ 0.09
LINC02353-201ENST00000515181 GALR2O43603 387 aaPredicted RBP15.58■□□□□ 0.08
LINC02353-201ENST00000515181 EHMT2Q96KQ7 1210 aa15.53■□□□□ 0.08
LINC02353-201ENST00000515181 SPDYE4A6NLX3 237 aa15.5■□□□□ 0.07
LINC02353-201ENST00000515181 PHF12Q96QT6 1004 aa15.47■□□□□ 0.07
LINC02353-201ENST00000515181 PAK3O75914 559 aaPredicted RBP15.46■□□□□ 0.07
LINC02353-201ENST00000515181 PLSCR2Q9NRY7 297 aa15.43■□□□□ 0.06
LINC02353-201ENST00000515181 OTUD5Q96G74 571 aa15.41■□□□□ 0.06
LINC02353-201ENST00000515181 POTEB2H3BUK9 544 aa15.39■□□□□ 0.05
LINC02353-201ENST00000515181 MNX1P50219 401 aaPredicted RBP15.37■□□□□ 0.05
LINC02353-201ENST00000515181 NPM1P06748 294 aaKnown RBP eCLIP15.36■□□□□ 0.05
LINC02353-201ENST00000515181 PELP1Q8IZL8 1130 aaKnown RBP15.3■□□□□ 0.04
LINC02353-201ENST00000515181 MS4A3Q96HJ5 214 aa15.24■□□□□ 0.03
LINC02353-201ENST00000515181 ASTLQ6HA08 431 aaPredicted RBP15.2■□□□□ 0.02
LINC02353-201ENST00000515181 METRNQ9UJH8 293 aa15.2■□□□□ 0.02
LINC02353-201ENST00000515181 POTEMA6NI47 508 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 313.6 ms