RNA–Protein interactions for RNA: ENST00000515171.5

ABLIM3-209, Transcript of actin binding LIM protein family member 3, humanhuman

TSL 2

Gene ABLIM3, Length 4,178 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABLIM3-209ENST00000515171 NISCHQ9Y2I1 1504 aa19.03■□□□□ 0.64
ABLIM3-209ENST00000515171 DCAF8L2P0C7V8 631 aa17.27■□□□□ 0.36
ABLIM3-209ENST00000515171 SHROOM4Q9ULL8 1493 aa16.98■□□□□ 0.31
ABLIM3-209ENST00000515171 SUPT5HO00267 1087 aaKnown RBP16.67■□□□□ 0.26
ABLIM3-209ENST00000515171 CCDC180Q9P1Z9 1646 aa15.94■□□□□ 0.14
ABLIM3-209ENST00000515171 ZCCHC6Q5VYS8 1495 aaKnown RBP15.92■□□□□ 0.14
ABLIM3-209ENST00000515171 ABCC9O60706 1549 aa15.91■□□□□ 0.14
ABLIM3-209ENST00000515171 EHMT2Q96KQ7 1210 aa15.74■□□□□ 0.11
ABLIM3-209ENST00000515171 FAM9AQ8IZU1 332 aaPredicted RBP15.57■□□□□ 0.08
ABLIM3-209ENST00000515171 CHIC1Q5VXU3 224 aa15.53■□□□□ 0.08
ABLIM3-209ENST00000515171 SCRIBQ14160 1630 aa15.51■□□□□ 0.07
ABLIM3-209ENST00000515171 PABPN1Q86U42 306 aaKnown RBP eCLIP15.45■□□□□ 0.06
ABLIM3-209ENST00000515171 TRIM41Q8WV44 630 aa15.38■□□□□ 0.05
ABLIM3-209ENST00000515171 LOC105371045A0A1W2PR82 267 aa15.35■□□□□ 0.05
ABLIM3-209ENST00000515171 DCAF1Q9Y4B6 1507 aa15.25■□□□□ 0.03
ABLIM3-209ENST00000515171 PCGF6Q9BYE7 350 aa15.21■□□□□ 0.03
ABLIM3-209ENST00000515171 TTBK1Q5TCY1 1321 aaPredicted RBP15.11■□□□□ 0.01
ABLIM3-209ENST00000515171 RSF1Q96T23 1441 aaPredicted RBP15.1■□□□□ 0.01
ABLIM3-209ENST00000515171 MYO15BQ96JP2 1530 aa15.09■□□□□ 0.01
ABLIM3-209ENST00000515171 NACADO15069 1562 aa15.08■□□□□ 0
ABLIM3-209ENST00000515171 CECR2Q9BXF3 1484 aa15.07■□□□□ 0
ABLIM3-209ENST00000515171 PPARGC1BQ86YN6 1023 aaKnown RBP15.05■□□□□ -0
ABLIM3-209ENST00000515171 RB1CC1Q8TDY2 1594 aa15.03■□□□□ -0
ABLIM3-209ENST00000515171 RANGAP1P46060 587 aaPredicted RBP15.02□□□□□ -0.01
ABLIM3-209ENST00000515171 UBTFP17480 764 aaKnown RBP14.88□□□□□ -0.03
ABLIM3-209ENST00000515171 MROH2BQ7Z745 1585 aa14.88□□□□□ -0.03
ABLIM3-209ENST00000515171 WIZO95785 1651 aa14.75□□□□□ -0.05
ABLIM3-209ENST00000515171 BAZ1AQ9NRL2 1556 aaPredicted RBP14.69□□□□□ -0.06
ABLIM3-209ENST00000515171 TRIM26Q12899 539 aaPredicted RBP14.69□□□□□ -0.06
ABLIM3-209ENST00000515171 APLP2Q06481 763 aa14.62□□□□□ -0.07
ABLIM3-209ENST00000515171 HRCP23327 699 aa14.62□□□□□ -0.07
ABLIM3-209ENST00000515171 CCDC88BA6NC98 1476 aa14.55□□□□□ -0.08
ABLIM3-209ENST00000515171 CSRNP3Q8WYN3 585 aa14.53□□□□□ -0.08
ABLIM3-209ENST00000515171 ABCC8Q09428 1581 aa14.52□□□□□ -0.08
ABLIM3-209ENST00000515171 ATP1B4Q9UN42 357 aaPredicted RBP14.52□□□□□ -0.09
ABLIM3-209ENST00000515171 BAZ1BQ9UIG0 1483 aaKnown RBP14.5□□□□□ -0.09
ABLIM3-209ENST00000515171 SMARCA4P51532 1647 aa14.5□□□□□ -0.09
ABLIM3-209ENST00000515171 CCER1Q8TC90 406 aaPredicted RBP14.49□□□□□ -0.09
ABLIM3-209ENST00000515171 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.43□□□□□ -0.1
ABLIM3-209ENST00000515171 TOP2AP11388 1531 aaKnown RBP14.43□□□□□ -0.1
ABLIM3-209ENST00000515171 SOGA1O94964 1423 aa14.42□□□□□ -0.1
ABLIM3-209ENST00000515171 HNRNPUL2Q1KMD3 747 aaKnown RBP14.4□□□□□ -0.1
ABLIM3-209ENST00000515171 WRNQ14191 1432 aaPredicted RBP eCLIP14.39□□□□□ -0.11
ABLIM3-209ENST00000515171 ATAD2BQ9ULI0 1458 aa14.35□□□□□ -0.11
ABLIM3-209ENST00000515171 UNC13AQ9UPW8 1703 aa14.35□□□□□ -0.11
ABLIM3-209ENST00000515171 BICRAQ9NZM4 1560 aa14.35□□□□□ -0.11
ABLIM3-209ENST00000515171 ITGAEP38570 1179 aa14.32□□□□□ -0.12
ABLIM3-209ENST00000515171 SMARCA2P51531 1590 aa14.32□□□□□ -0.12
ABLIM3-209ENST00000515171 RUSC2Q8N2Y8 1516 aa14.29□□□□□ -0.12
ABLIM3-209ENST00000515171 ZEB1P37275 1124 aaPredicted RBP14.27□□□□□ -0.12
ABLIM3-209ENST00000515171 P3H3Q8IVL6 736 aa14.27□□□□□ -0.12
ABLIM3-209ENST00000515171 CEP162Q5TB80 1403 aa14.24□□□□□ -0.13
ABLIM3-209ENST00000515171 SLC24A1O60721 1099 aa14.21□□□□□ -0.14
ABLIM3-209ENST00000515171 GOLGA3Q08378 1498 aa14.14□□□□□ -0.15
ABLIM3-209ENST00000515171 EIF4G1Q04637 1599 aaKnown RBP14.13□□□□□ -0.15
ABLIM3-209ENST00000515171 CLIP1P30622 1438 aa14.13□□□□□ -0.15
ABLIM3-209ENST00000515171 TNIKQ9UKE5 1360 aa14.12□□□□□ -0.15
ABLIM3-209ENST00000515171 EEA1Q15075 1411 aa14.11□□□□□ -0.15
ABLIM3-209ENST00000515171 ARID3CA6NKF2 412 aa14.09□□□□□ -0.15
ABLIM3-209ENST00000515171 CEP164Q9UPV0 1460 aa14.06□□□□□ -0.16
ABLIM3-209ENST00000515171 FAM50AQ14320 339 aaKnown RBP14.04□□□□□ -0.16
ABLIM3-209ENST00000515171 FBLN2P98095 1184 aa14.03□□□□□ -0.16
ABLIM3-209ENST00000515171 DNAJC5BQ9UF47 199 aa14.02□□□□□ -0.16
ABLIM3-209ENST00000515171 KIF27Q86VH2 1401 aa14.02□□□□□ -0.16
ABLIM3-209ENST00000515171 NCAPD3P42695 1498 aa14.02□□□□□ -0.16
ABLIM3-209ENST00000515171 SYNJ1O43426 1573 aa14.02□□□□□ -0.16
ABLIM3-209ENST00000515171 RAPGEF2Q9Y4G8 1499 aa14.01□□□□□ -0.17
ABLIM3-209ENST00000515171 CUX2O14529 1486 aa14□□□□□ -0.17
ABLIM3-209ENST00000515171 CADPSQ9ULU8 1353 aa14□□□□□ -0.17
ABLIM3-209ENST00000515171 YTHDC1Q96MU7 727 aaKnown RBP13.93□□□□□ -0.18
ABLIM3-209ENST00000515171 PEG3Q9GZU2 1588 aa13.91□□□□□ -0.18
ABLIM3-209ENST00000515171 CC2D2AQ9P2K1 1620 aa13.9□□□□□ -0.18
ABLIM3-209ENST00000515171 NESP48681 1621 aa13.9□□□□□ -0.18
ABLIM3-209ENST00000515171 KANK4Q5T7N3 995 aaPredicted RBP13.9□□□□□ -0.19
ABLIM3-209ENST00000515171 CARMIL1Q5VZK9 1371 aa13.89□□□□□ -0.19
ABLIM3-209ENST00000515171 TDRD9Q8NDG6 1382 aaKnown RBP13.89□□□□□ -0.19
ABLIM3-209ENST00000515171 FANCD2Q9BXW9 1451 aa13.86□□□□□ -0.19
ABLIM3-209ENST00000515171 CFTRP13569 1480 aa13.86□□□□□ -0.19
ABLIM3-209ENST00000515171 HMGXB3Q12766 1538 aa13.84□□□□□ -0.19
ABLIM3-209ENST00000515171 DIEXFQ68CQ4 756 aaKnown RBP13.84□□□□□ -0.19
ABLIM3-209ENST00000515171 VPS8Q8N3P4 1428 aa13.84□□□□□ -0.19
ABLIM3-209ENST00000515171 NEUROD1Q13562 356 aa13.84□□□□□ -0.19
ABLIM3-209ENST00000515171 CUX1P39880 1505 aa13.83□□□□□ -0.19
ABLIM3-209ENST00000515171 RAD54L2Q9Y4B4 1467 aa13.83□□□□□ -0.2
ABLIM3-209ENST00000515171 FGD5Q6ZNL6 1462 aa13.81□□□□□ -0.2
ABLIM3-209ENST00000515171 IGF1RP08069 1367 aa13.77□□□□□ -0.2
ABLIM3-209ENST00000515171 TOP2BQ02880 1626 aa13.77□□□□□ -0.2
ABLIM3-209ENST00000515171 PDS5BQ9NTI5 1447 aa13.74□□□□□ -0.21
ABLIM3-209ENST00000515171 CHIC2Q9UKJ5 165 aa13.72□□□□□ -0.21
ABLIM3-209ENST00000515171 CHMP7Q8WUX9 453 aaPredicted RBP13.71□□□□□ -0.21
ABLIM3-209ENST00000515171 TRIM52Q96A61 297 aa13.71□□□□□ -0.21
ABLIM3-209ENST00000515171 ERCC6Q03468 1493 aa13.71□□□□□ -0.21
ABLIM3-209ENST00000515171 ZNF316A6NFI3 1004 aaPredicted RBP13.7□□□□□ -0.22
ABLIM3-209ENST00000515171 FHOD3Q2V2M9 1422 aa13.69□□□□□ -0.22
ABLIM3-209ENST00000515171 KIF21BO75037 1637 aa13.69□□□□□ -0.22
ABLIM3-209ENST00000515171 MTUS2Q5JR59 1369 aa13.69□□□□□ -0.22
ABLIM3-209ENST00000515171 ZNF777Q9ULD5 760 aaPredicted RBP13.68□□□□□ -0.22
ABLIM3-209ENST00000515171 PRXQ9BXM0 1461 aa13.66□□□□□ -0.22
ABLIM3-209ENST00000515171 CENPBP07199 599 aaPredicted RBP13.65□□□□□ -0.22
ABLIM3-209ENST00000515171 ARAP1Q96P48 1450 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms