RNA–Protein interactions for RNA: ENST00000515109.5

PRDM5-212, Transcript of PR/SET domain 5, humanhuman

TSL 1 (best) BASIC

Gene PRDM5, Length 2,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-212ENST00000515109 NISCHQ9Y2I1 1504 aa36.73■■■■□ 3.47
PRDM5-212ENST00000515109 CCDC180Q9P1Z9 1646 aa31.44■■■□□ 2.62
PRDM5-212ENST00000515109 ZCCHC6Q5VYS8 1495 aaKnown RBP31.06■■■□□ 2.56
PRDM5-212ENST00000515109 SHROOM4Q9ULL8 1493 aa31.04■■■□□ 2.56
PRDM5-212ENST00000515109 SUPT5HO00267 1087 aaKnown RBP30.36■■■□□ 2.45
PRDM5-212ENST00000515109 DCAF8L2P0C7V8 631 aa30.3■■■□□ 2.44
PRDM5-212ENST00000515109 DCAF1Q9Y4B6 1507 aa30.21■■■□□ 2.43
PRDM5-212ENST00000515109 CHIC1Q5VXU3 224 aa29.48■■■□□ 2.31
PRDM5-212ENST00000515109 MYO15BQ96JP2 1530 aa29.4■■■□□ 2.3
PRDM5-212ENST00000515109 SCRIBQ14160 1630 aa29.32■■■□□ 2.28
PRDM5-212ENST00000515109 ABCC9O60706 1549 aa29.31■■■□□ 2.28
PRDM5-212ENST00000515109 NACADO15069 1562 aa29.04■■■□□ 2.24
PRDM5-212ENST00000515109 RSF1Q96T23 1441 aaPredicted RBP28.95■■■□□ 2.23
PRDM5-212ENST00000515109 RB1CC1Q8TDY2 1594 aa28.69■■■□□ 2.18
PRDM5-212ENST00000515109 CECR2Q9BXF3 1484 aa28.59■■■□□ 2.17
PRDM5-212ENST00000515109 LOC105371045A0A1W2PR82 267 aa28.54■■■□□ 2.16
PRDM5-212ENST00000515109 MROH2BQ7Z745 1585 aa28.51■■■□□ 2.16
PRDM5-212ENST00000515109 WIZO95785 1651 aa28.39■■■□□ 2.14
PRDM5-212ENST00000515109 PCGF6Q9BYE7 350 aa28.36■■■□□ 2.13
PRDM5-212ENST00000515109 TRIM41Q8WV44 630 aa28.34■■■□□ 2.13
PRDM5-212ENST00000515109 HRCP23327 699 aa28.31■■■□□ 2.12
PRDM5-212ENST00000515109 BAZ1AQ9NRL2 1556 aaPredicted RBP28.26■■■□□ 2.11
PRDM5-212ENST00000515109 UNC13AQ9UPW8 1703 aa28.22■■■□□ 2.11
PRDM5-212ENST00000515109 SMARCA4P51532 1647 aa28.05■■■□□ 2.08
PRDM5-212ENST00000515109 FAM9AQ8IZU1 332 aaPredicted RBP28.04■■■□□ 2.08
PRDM5-212ENST00000515109 EIF4G1Q04637 1599 aaKnown RBP27.99■■■□□ 2.07
PRDM5-212ENST00000515109 TOP2AP11388 1531 aaKnown RBP27.98■■■□□ 2.07
PRDM5-212ENST00000515109 TRIM26Q12899 539 aaPredicted RBP27.93■■■□□ 2.06
PRDM5-212ENST00000515109 SMARCA2P51531 1590 aa27.81■■■□□ 2.04
PRDM5-212ENST00000515109 BICRAQ9NZM4 1560 aa27.79■■■□□ 2.04
PRDM5-212ENST00000515109 CCDC88BA6NC98 1476 aa27.78■■■□□ 2.04
PRDM5-212ENST00000515109 EHMT2Q96KQ7 1210 aa27.75■■■□□ 2.03
PRDM5-212ENST00000515109 PABPN1Q86U42 306 aaKnown RBP eCLIP27.68■■■□□ 2.02
PRDM5-212ENST00000515109 PPARGC1BQ86YN6 1023 aaKnown RBP27.66■■■□□ 2.02
PRDM5-212ENST00000515109 ABCC8Q09428 1581 aa27.66■■■□□ 2.02
PRDM5-212ENST00000515109 PEG3Q9GZU2 1588 aa27.53■■■□□ 2
PRDM5-212ENST00000515109 SOGA1O94964 1423 aa27.32■■□□□ 1.96
PRDM5-212ENST00000515109 ATAD2BQ9ULI0 1458 aa27.3■■□□□ 1.96
PRDM5-212ENST00000515109 ZEB1P37275 1124 aaPredicted RBP27.29■■□□□ 1.96
PRDM5-212ENST00000515109 EEA1Q15075 1411 aa27.27■■□□□ 1.96
PRDM5-212ENST00000515109 BAZ1BQ9UIG0 1483 aaKnown RBP27.24■■□□□ 1.95
PRDM5-212ENST00000515109 WRNQ14191 1432 aaPredicted RBP eCLIP27.22■■□□□ 1.95
PRDM5-212ENST00000515109 RUSC2Q8N2Y8 1516 aa27.2■■□□□ 1.94
PRDM5-212ENST00000515109 CEP162Q5TB80 1403 aa27.17■■□□□ 1.94
PRDM5-212ENST00000515109 CSRNP3Q8WYN3 585 aa27.15■■□□□ 1.94
PRDM5-212ENST00000515109 TNIKQ9UKE5 1360 aa27.14■■□□□ 1.94
PRDM5-212ENST00000515109 SYNJ1O43426 1573 aa27.13■■□□□ 1.93
PRDM5-212ENST00000515109 GOLGA3Q08378 1498 aa27.06■■□□□ 1.92
PRDM5-212ENST00000515109 UBTFP17480 764 aaKnown RBP27.01■■□□□ 1.91
PRDM5-212ENST00000515109 KIF21BO75037 1637 aa26.94■■□□□ 1.9
PRDM5-212ENST00000515109 CEP164Q9UPV0 1460 aa26.92■■□□□ 1.9
PRDM5-212ENST00000515109 HMGXB3Q12766 1538 aa26.86■■□□□ 1.89
PRDM5-212ENST00000515109 TOP2BQ02880 1626 aa26.85■■□□□ 1.89
PRDM5-212ENST00000515109 TTBK1Q5TCY1 1321 aaPredicted RBP26.84■■□□□ 1.89
PRDM5-212ENST00000515109 NCAPD3P42695 1498 aa26.81■■□□□ 1.88
PRDM5-212ENST00000515109 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.79■■□□□ 1.88
PRDM5-212ENST00000515109 BIVM-ERCC5R4GMW8 1640 aa26.79■■□□□ 1.88
PRDM5-212ENST00000515109 CCER1Q8TC90 406 aaPredicted RBP26.75■■□□□ 1.87
PRDM5-212ENST00000515109 RAPGEF2Q9Y4G8 1499 aa26.7■■□□□ 1.86
PRDM5-212ENST00000515109 CLIP1P30622 1438 aa26.7■■□□□ 1.86
PRDM5-212ENST00000515109 VPS8Q8N3P4 1428 aa26.58■■□□□ 1.85
PRDM5-212ENST00000515109 CUX1P39880 1505 aa26.58■■□□□ 1.85
PRDM5-212ENST00000515109 CFTRP13569 1480 aa26.55■■□□□ 1.84
PRDM5-212ENST00000515109 ERICH3Q5RHP9 1530 aa26.53■■□□□ 1.84
PRDM5-212ENST00000515109 PRDM2Q13029 1718 aa26.51■■□□□ 1.83
PRDM5-212ENST00000515109 PRXQ9BXM0 1461 aa26.48■■□□□ 1.83
PRDM5-212ENST00000515109 RANGAP1P46060 587 aaPredicted RBP26.44■■□□□ 1.82
PRDM5-212ENST00000515109 APLP2Q06481 763 aa26.41■■□□□ 1.82
PRDM5-212ENST00000515109 KIF27Q86VH2 1401 aa26.41■■□□□ 1.82
PRDM5-212ENST00000515109 ARAP1Q96P48 1450 aa26.31■■□□□ 1.8
PRDM5-212ENST00000515109 HNRNPUL2Q1KMD3 747 aaKnown RBP26.29■■□□□ 1.8
PRDM5-212ENST00000515109 CADPSQ9ULU8 1353 aa26.26■■□□□ 1.79
PRDM5-212ENST00000515109 CC2D2AQ9P2K1 1620 aa26.24■■□□□ 1.79
PRDM5-212ENST00000515109 CUX2O14529 1486 aa26.17■■□□□ 1.78
PRDM5-212ENST00000515109 DIEXFQ68CQ4 756 aaKnown RBP26.13■■□□□ 1.77
PRDM5-212ENST00000515109 FGD5Q6ZNL6 1462 aa26.13■■□□□ 1.77
PRDM5-212ENST00000515109 ARHGAP35Q9NRY4 1499 aa26.1■■□□□ 1.77
PRDM5-212ENST00000515109 IGF1RP08069 1367 aa26.08■■□□□ 1.77
PRDM5-212ENST00000515109 KANK4Q5T7N3 995 aaPredicted RBP26.04■■□□□ 1.76
PRDM5-212ENST00000515109 FANCD2Q9BXW9 1451 aa26.03■■□□□ 1.76
PRDM5-212ENST00000515109 ZNF316A6NFI3 1004 aaPredicted RBP26■■□□□ 1.75
PRDM5-212ENST00000515109 CARMIL1Q5VZK9 1371 aa25.99■■□□□ 1.75
PRDM5-212ENST00000515109 DNMBPQ6XZF7 1577 aa25.94■■□□□ 1.74
PRDM5-212ENST00000515109 RRBP1Q9P2E9 1410 aaKnown RBP25.93■■□□□ 1.74
PRDM5-212ENST00000515109 SCAF1Q9H7N4 1312 aaKnown RBP25.93■■□□□ 1.74
PRDM5-212ENST00000515109 NESP48681 1621 aa25.86■■□□□ 1.73
PRDM5-212ENST00000515109 TOPBP1Q92547 1522 aa25.86■■□□□ 1.73
PRDM5-212ENST00000515109 TIAM1Q13009 1591 aa25.84■■□□□ 1.73
PRDM5-212ENST00000515109 RAD54L2Q9Y4B4 1467 aa25.84■■□□□ 1.73
PRDM5-212ENST00000515109 ABCA10Q8WWZ4 1543 aa25.83■■□□□ 1.73
PRDM5-212ENST00000515109 POLA1P09884 1462 aaPredicted RBP25.83■■□□□ 1.72
PRDM5-212ENST00000515109 DHX57Q6P158 1386 aaKnown RBP25.82■■□□□ 1.72
PRDM5-212ENST00000515109 CCNB3Q8WWL7 1395 aa25.82■■□□□ 1.72
PRDM5-212ENST00000515109 MAP3K1Q13233 1512 aa25.81■■□□□ 1.72
PRDM5-212ENST00000515109 CLSPNQ9HAW4 1339 aa25.81■■□□□ 1.72
PRDM5-212ENST00000515109 ACIN1Q9UKV3 1341 aaKnown RBP25.79■■□□□ 1.72
PRDM5-212ENST00000515109 CUL7Q14999 1698 aa25.75■■□□□ 1.71
PRDM5-212ENST00000515109 LAMC3Q9Y6N6 1575 aa25.75■■□□□ 1.71
PRDM5-212ENST00000515109 NEUROD1Q13562 356 aa25.74■■□□□ 1.71
PRDM5-212ENST00000515109 FHAD1B1AJZ9 1412 aa25.73■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms