RNA–Protein interactions for RNA: ENST00000513944.5

TNPO1-209, Transcript of transportin 1, humanhuman

TSL 4

Gene TNPO1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-209ENST00000513944 AEBP2Q6ZN18 517 aaPredicted RBP26.99■■□□□ 1.91
TNPO1-209ENST00000513944 CHIC1Q5VXU3 224 aa25.14■■□□□ 1.62
TNPO1-209ENST00000513944 SENP3Q9H4L4 574 aaPredicted RBP23.04■■□□□ 1.28
TNPO1-209ENST00000513944 PHF23Q9BUL5 403 aaPredicted RBP22.69■■□□□ 1.22
TNPO1-209ENST00000513944 FOXD1Q16676 465 aa21.57■■□□□ 1.04
TNPO1-209ENST00000513944 POTEDQ86YR6 584 aa20.74■□□□□ 0.91
TNPO1-209ENST00000513944 MSH5O43196 834 aa20.33■□□□□ 0.85
TNPO1-209ENST00000513944 PIAS4Q8N2W9 510 aaPredicted RBP20■□□□□ 0.79
TNPO1-209ENST00000513944 PPP6R1Q9UPN7 881 aa19.81■□□□□ 0.76
TNPO1-209ENST00000513944 PLPPR3Q6T4P5 718 aa19.8■□□□□ 0.76
TNPO1-209ENST00000513944 ADRA2BP18089 450 aa19.68■□□□□ 0.74
TNPO1-209ENST00000513944 MAPK8IP2Q13387 824 aaPredicted RBP18.24■□□□□ 0.51
TNPO1-209ENST00000513944 DMRT2Q9Y5R5 561 aa18.22■□□□□ 0.51
TNPO1-209ENST00000513944 SCAF1Q9H7N4 1312 aaKnown RBP17.94■□□□□ 0.46
TNPO1-209ENST00000513944 CACNB1Q02641 598 aaPredicted RBP17.73■□□□□ 0.43
TNPO1-209ENST00000513944 DCAF8L1A6NGE4 600 aa17.42■□□□□ 0.38
TNPO1-209ENST00000513944 HOXD11P31277 338 aaPredicted RBP17.36■□□□□ 0.37
TNPO1-209ENST00000513944 RNF39Q9H2S5 420 aa17.34■□□□□ 0.37
TNPO1-209ENST00000513944 PPP4R3CPQ6ZMV5 832 aa17.31■□□□□ 0.36
TNPO1-209ENST00000513944 CNKSR2Q8WXI2 1034 aa17.09■□□□□ 0.33
TNPO1-209ENST00000513944 RNF216Q9NWF9 866 aaPredicted RBP17.07■□□□□ 0.32
TNPO1-209ENST00000513944 C1QBPQ07021 282 aaKnown RBP17.03■□□□□ 0.32
TNPO1-209ENST00000513944 DNAJC5BQ9UF47 199 aa16.86■□□□□ 0.29
TNPO1-209ENST00000513944 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.47■□□□□ 0.232e-11■■□□□ 12.8
TNPO1-209ENST00000513944 NCBP3Q53F19 620 aaKnown RBP16.44■□□□□ 0.22
TNPO1-209ENST00000513944 NPM3O75607 178 aaKnown RBP16.27■□□□□ 0.2
TNPO1-209ENST00000513944 U3KPZ7 1027 aaPredicted RBP16.14■□□□□ 0.17
TNPO1-209ENST00000513944 POTEHQ6S545 545 aa16.13■□□□□ 0.17
TNPO1-209ENST00000513944 DSG3P32926 999 aa16.08■□□□□ 0.16
TNPO1-209ENST00000513944 SPINK5Q9NQ38 1064 aaPredicted RBP16.05■□□□□ 0.16
TNPO1-209ENST00000513944 CAPN15O75808 1086 aa15.99■□□□□ 0.15
TNPO1-209ENST00000513944 SLC4A2P04920 1241 aa15.69■□□□□ 0.1
TNPO1-209ENST00000513944 TRHP20396 242 aaPredicted RBP15.61■□□□□ 0.09
TNPO1-209ENST00000513944 ABCB7O75027 752 aa15.6■□□□□ 0.09
TNPO1-209ENST00000513944 ZNF219Q9P2Y4 722 aaPredicted RBP15.57■□□□□ 0.08
TNPO1-209ENST00000513944 APLP2Q06481 763 aa15.54■□□□□ 0.08
TNPO1-209ENST00000513944 KCNA4P22459 653 aa15.51■□□□□ 0.07
TNPO1-209ENST00000513944 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.42■□□□□ 0.06
TNPO1-209ENST00000513944 HNRNPUL2Q1KMD3 747 aaKnown RBP15.42■□□□□ 0.06
TNPO1-209ENST00000513944 SAMD1Q6SPF0 538 aaPredicted RBP15.33■□□□□ 0.04
TNPO1-209ENST00000513944 RBM42Q9BTD8 480 aaKnown RBP15.3■□□□□ 0.04
TNPO1-209ENST00000513944 CHRDL2Q6WN34 429 aa15.18■□□□□ 0.02
TNPO1-209ENST00000513944 POLA2Q14181 598 aa15.1■□□□□ 0.01
TNPO1-209ENST00000513944 MYCNP04198 464 aaPredicted RBP15.03■□□□□ -0
TNPO1-209ENST00000513944 SP7Q8TDD2 431 aaPredicted RBP14.89□□□□□ -0.03
TNPO1-209ENST00000513944 AKT1S1Q96B36 256 aa14.86□□□□□ -0.03
TNPO1-209ENST00000513944 ATF5Q9Y2D1 282 aaPredicted RBP14.77□□□□□ -0.05
TNPO1-209ENST00000513944 REM2Q8IYK8 340 aaPredicted RBP14.73□□□□□ -0.05
TNPO1-209ENST00000513944 PIP4P2Q8N4L2 257 aa14.73□□□□□ -0.05
TNPO1-209ENST00000513944 ZBTB12Q9Y330 459 aaPredicted RBP14.72□□□□□ -0.05
TNPO1-209ENST00000513944 OSCARQ8IYS5 282 aa14.66□□□□□ -0.06
TNPO1-209ENST00000513944 FOXD4L1Q9NU39 408 aa14.61□□□□□ -0.07
TNPO1-209ENST00000513944 PITPNM1O00562 1244 aa14.59□□□□□ -0.07
TNPO1-209ENST00000513944 FXR2P51116 673 aaKnown RBP eCLIP14.58□□□□□ -0.082e-7■■■■□ 20.6
TNPO1-209ENST00000513944 HAX1O00165 279 aa14.55□□□□□ -0.08
TNPO1-209ENST00000513944 SLC4A1APQ9BWU0 796 aaKnown RBP14.5□□□□□ -0.09
TNPO1-209ENST00000513944 EVX2Q03828 476 aa14.42□□□□□ -0.1
TNPO1-209ENST00000513944 ZBTB22O15209 634 aa14.28□□□□□ -0.12
TNPO1-209ENST00000513944 SPDYE2BA6NHP3 402 aa14.26□□□□□ -0.13
TNPO1-209ENST00000513944 SPDYE6P0CI01 402 aa14.26□□□□□ -0.13
TNPO1-209ENST00000513944 SPDYE2Q495Y8 402 aa14.26□□□□□ -0.13
TNPO1-209ENST00000513944 ATXN8OSP0DMR3 200 aa14.21□□□□□ -0.13
TNPO1-209ENST00000513944 PRKAR2AP13861 404 aaKnown RBP14.19□□□□□ -0.14
TNPO1-209ENST00000513944 FBLN2P98095 1184 aa14.14□□□□□ -0.15
TNPO1-209ENST00000513944 C19orf67A6NJJ6 358 aa14.12□□□□□ -0.15
TNPO1-209ENST00000513944 SPDYE1Q8NFV5 336 aaPredicted RBP14.11□□□□□ -0.15
TNPO1-209ENST00000513944 CLEC11AQ9Y240 323 aa14.1□□□□□ -0.15
TNPO1-209ENST00000513944 MKRN4PQ13434 485 aaPredicted RBP14.07□□□□□ -0.16
TNPO1-209ENST00000513944 SSUH2Q9Y2M2 353 aa14.04□□□□□ -0.16
TNPO1-209ENST00000513944 GABBR2O75899 941 aa14.02□□□□□ -0.17
TNPO1-209ENST00000513944 ZNF692Q9BU19 519 aaPredicted RBP13.99□□□□□ -0.17
TNPO1-209ENST00000513944 LHX8Q68G74 356 aa13.95□□□□□ -0.18
TNPO1-209ENST00000513944 CHADLQ6NUI6 762 aa13.93□□□□□ -0.18
TNPO1-209ENST00000513944 PRR29P0C7W0 189 aa13.81□□□□□ -0.2
TNPO1-209ENST00000513944 PABPN1Q86U42 306 aaKnown RBP eCLIP13.78□□□□□ -0.2
TNPO1-209ENST00000513944 POTEIP0CG38 1075 aa13.76□□□□□ -0.21
TNPO1-209ENST00000513944 CD44P16070 742 aaKnown RBP13.7□□□□□ -0.22
TNPO1-209ENST00000513944 FARP1Q9Y4F1 1045 aaPredicted RBP13.67□□□□□ -0.22
TNPO1-209ENST00000513944 CLCN6P51797 869 aa13.6□□□□□ -0.23
TNPO1-209ENST00000513944 DCBLD2Q96PD2 775 aa13.5□□□□□ -0.25
TNPO1-209ENST00000513944 ZNF579Q8NAF0 562 aaKnown RBP13.49□□□□□ -0.25
TNPO1-209ENST00000513944 PLSCR2Q9NRY7 297 aa13.43□□□□□ -0.26
TNPO1-209ENST00000513944 ZRANB1Q9UGI0 708 aa13.42□□□□□ -0.26
TNPO1-209ENST00000513944 CREBZFQ9NS37 354 aa13.4□□□□□ -0.26
TNPO1-209ENST00000513944 GALR2O43603 387 aaPredicted RBP13.37□□□□□ -0.27
TNPO1-209ENST00000513944 OTUD5Q96G74 571 aa13.34□□□□□ -0.27
TNPO1-209ENST00000513944 POTEB2H3BUK9 544 aa13.3□□□□□ -0.28
TNPO1-209ENST00000513944 STAG3Q9UJ98 1225 aa13.27□□□□□ -0.29
TNPO1-209ENST00000513944 PHF12Q96QT6 1004 aa13.22□□□□□ -0.29
TNPO1-209ENST00000513944 PELP1Q8IZL8 1130 aaKnown RBP13.17□□□□□ -0.3
TNPO1-209ENST00000513944 POTEMA6NI47 508 aa13.16□□□□□ -0.3
TNPO1-209ENST00000513944 CSRNP3Q8WYN3 585 aa13.16□□□□□ -0.3
TNPO1-209ENST00000513944 PAK3O75914 559 aaPredicted RBP13.15□□□□□ -0.3
TNPO1-209ENST00000513944 MNX1P50219 401 aaPredicted RBP13.13□□□□□ -0.31
TNPO1-209ENST00000513944 POTEGQ6S5H5 508 aa13.11□□□□□ -0.31
TNPO1-209ENST00000513944 SPDYE4A6NLX3 237 aa13.09□□□□□ -0.31
TNPO1-209ENST00000513944 NPM1P06748 294 aaKnown RBP eCLIP13.07□□□□□ -0.32
TNPO1-209ENST00000513944 ASTLQ6HA08 431 aaPredicted RBP13.06□□□□□ -0.32
TNPO1-209ENST00000513944 POTEJP0CG39 1038 aa13.04□□□□□ -0.32
TNPO1-209ENST00000513944 MS4A3Q96HJ5 214 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms