RNA–Protein interactions for RNA: ENST00000513870.1

HMGN1P15-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 15, humanhuman

BASIC

Gene HMGN1P15, Length 295 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P15-201ENST00000513870 AEBP2Q6ZN18 517 aaPredicted RBP28.67■■■□□ 2.18
HMGN1P15-201ENST00000513870 CHIC1Q5VXU3 224 aa28.09■■■□□ 2.09
HMGN1P15-201ENST00000513870 PHF23Q9BUL5 403 aaPredicted RBP24.7■■□□□ 1.54
HMGN1P15-201ENST00000513870 SENP3Q9H4L4 574 aaPredicted RBP24.33■■□□□ 1.49
HMGN1P15-201ENST00000513870 PLPPR3Q6T4P5 718 aa22.86■■□□□ 1.25
HMGN1P15-201ENST00000513870 FOXD1Q16676 465 aa22.57■■□□□ 1.2
HMGN1P15-201ENST00000513870 ADRA2BP18089 450 aa21.79■■□□□ 1.08
HMGN1P15-201ENST00000513870 PPP6R1Q9UPN7 881 aa21.78■■□□□ 1.08
HMGN1P15-201ENST00000513870 PIAS4Q8N2W9 510 aaPredicted RBP21.34■■□□□ 1.01
HMGN1P15-201ENST00000513870 MSH5O43196 834 aa20.78■□□□□ 0.92
HMGN1P15-201ENST00000513870 PPP4R3CPQ6ZMV5 832 aa20.17■□□□□ 0.82
HMGN1P15-201ENST00000513870 SCAF1Q9H7N4 1312 aaKnown RBP19.94■□□□□ 0.78
HMGN1P15-201ENST00000513870 KCNA4P22459 653 aa19.81■□□□□ 0.76
HMGN1P15-201ENST00000513870 MAPK8IP2Q13387 824 aaPredicted RBP19.74■□□□□ 0.75
HMGN1P15-201ENST00000513870 NCBP3Q53F19 620 aaKnown RBP19.67■□□□□ 0.74
HMGN1P15-201ENST00000513870 CNKSR2Q8WXI2 1034 aa19.57■□□□□ 0.72
HMGN1P15-201ENST00000513870 DMRT2Q9Y5R5 561 aa19.43■□□□□ 0.7
HMGN1P15-201ENST00000513870 NPM3O75607 178 aaKnown RBP19.38■□□□□ 0.69
HMGN1P15-201ENST00000513870 RNF216Q9NWF9 866 aaPredicted RBP19.15■□□□□ 0.66
HMGN1P15-201ENST00000513870 HOXD11P31277 338 aaPredicted RBP19.03■□□□□ 0.64
HMGN1P15-201ENST00000513870 SLC4A1APQ9BWU0 796 aaKnown RBP18.89■□□□□ 0.61
HMGN1P15-201ENST00000513870 POTEDQ86YR6 584 aa18.76■□□□□ 0.59
HMGN1P15-201ENST00000513870 DNAJC5BQ9UF47 199 aa18.7■□□□□ 0.58
HMGN1P15-201ENST00000513870 DCAF8L1A6NGE4 600 aa18.67■□□□□ 0.58
HMGN1P15-201ENST00000513870 EHMT2Q96KQ7 1210 aa18.51■□□□□ 0.55
HMGN1P15-201ENST00000513870 SLC4A2P04920 1241 aa18.25■□□□□ 0.51
HMGN1P15-201ENST00000513870 ZBTB22O15209 634 aa18.21■□□□□ 0.51
HMGN1P15-201ENST00000513870 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.21■□□□□ 0.51
HMGN1P15-201ENST00000513870 FOXD4L1Q9NU39 408 aa18.2■□□□□ 0.5
HMGN1P15-201ENST00000513870 CSRNP3Q8WYN3 585 aa18.18■□□□□ 0.5
HMGN1P15-201ENST00000513870 MYCNP04198 464 aaPredicted RBP17.91■□□□□ 0.46
HMGN1P15-201ENST00000513870 U3KPZ7 1027 aaPredicted RBP17.9■□□□□ 0.46
HMGN1P15-201ENST00000513870 RNF39Q9H2S5 420 aa17.8■□□□□ 0.44
HMGN1P15-201ENST00000513870 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.71■□□□□ 0.43
HMGN1P15-201ENST00000513870 HNRNPUL2Q1KMD3 747 aaKnown RBP17.71■□□□□ 0.43
HMGN1P15-201ENST00000513870 SAMD1Q6SPF0 538 aaPredicted RBP17.65■□□□□ 0.42
HMGN1P15-201ENST00000513870 C1QBPQ07021 282 aaKnown RBP17.59■□□□□ 0.41
HMGN1P15-201ENST00000513870 ATXN8OSP0DMR3 200 aa17.52■□□□□ 0.4
HMGN1P15-201ENST00000513870 APLP2Q06481 763 aa17.51■□□□□ 0.39
HMGN1P15-201ENST00000513870 ATF5Q9Y2D1 282 aaPredicted RBP17.42■□□□□ 0.38
HMGN1P15-201ENST00000513870 SPINK5Q9NQ38 1064 aaPredicted RBP17.38■□□□□ 0.37
HMGN1P15-201ENST00000513870 CAPN15O75808 1086 aa17.34■□□□□ 0.37
HMGN1P15-201ENST00000513870 CACNB1Q02641 598 aaPredicted RBP17.32■□□□□ 0.36
HMGN1P15-201ENST00000513870 TRHP20396 242 aaPredicted RBP17.28■□□□□ 0.36
HMGN1P15-201ENST00000513870 ZNF219Q9P2Y4 722 aaPredicted RBP17.25■□□□□ 0.35
HMGN1P15-201ENST00000513870 ABCB7O75027 752 aa17.02■□□□□ 0.32
HMGN1P15-201ENST00000513870 POLA2Q14181 598 aa16.99■□□□□ 0.31
HMGN1P15-201ENST00000513870 DSG3P32926 999 aa16.98■□□□□ 0.31
HMGN1P15-201ENST00000513870 ZBTB12Q9Y330 459 aaPredicted RBP16.72■□□□□ 0.27
HMGN1P15-201ENST00000513870 FBLN2P98095 1184 aa16.71■□□□□ 0.27
HMGN1P15-201ENST00000513870 MKRN4PQ13434 485 aaPredicted RBP16.66■□□□□ 0.26
HMGN1P15-201ENST00000513870 FKBP8Q14318 412 aa16.48■□□□□ 0.23
HMGN1P15-201ENST00000513870 OSCARQ8IYS5 282 aa16.43■□□□□ 0.22
HMGN1P15-201ENST00000513870 SPDYE4A6NLX3 237 aa16.36■□□□□ 0.21
HMGN1P15-201ENST00000513870 SPDYE2BA6NHP3 402 aa16.26■□□□□ 0.19
HMGN1P15-201ENST00000513870 SPDYE6P0CI01 402 aa16.26■□□□□ 0.19
HMGN1P15-201ENST00000513870 SPDYE2Q495Y8 402 aa16.26■□□□□ 0.19
HMGN1P15-201ENST00000513870 ZNF692Q9BU19 519 aaPredicted RBP16.23■□□□□ 0.19
HMGN1P15-201ENST00000513870 RBM42Q9BTD8 480 aaKnown RBP16.19■□□□□ 0.18
HMGN1P15-201ENST00000513870 SSUH2Q9Y2M2 353 aa16.13■□□□□ 0.17
HMGN1P15-201ENST00000513870 PABPN1Q86U42 306 aaKnown RBP eCLIP16.03■□□□□ 0.16
HMGN1P15-201ENST00000513870 PROM2Q8N271 834 aa16.03■□□□□ 0.16
HMGN1P15-201ENST00000513870 AKT1S1Q96B36 256 aa16■□□□□ 0.15
HMGN1P15-201ENST00000513870 REM2Q8IYK8 340 aaPredicted RBP15.86■□□□□ 0.13
HMGN1P15-201ENST00000513870 FBXO3Q9UK99 471 aa15.85■□□□□ 0.13
HMGN1P15-201ENST00000513870 SPDYE1Q8NFV5 336 aaPredicted RBP15.78■□□□□ 0.12
HMGN1P15-201ENST00000513870 STAG3Q9UJ98 1225 aa15.75■□□□□ 0.11
HMGN1P15-201ENST00000513870 CLEC11AQ9Y240 323 aa15.74■□□□□ 0.11
HMGN1P15-201ENST00000513870 PITPNM1O00562 1244 aa15.68■□□□□ 0.1
HMGN1P15-201ENST00000513870 VASPP50552 380 aaPredicted RBP15.63■□□□□ 0.09
HMGN1P15-201ENST00000513870 PRR29P0C7W0 189 aa15.58■□□□□ 0.08
HMGN1P15-201ENST00000513870 PLCD3Q8N3E9 789 aa15.52■□□□□ 0.08
HMGN1P15-201ENST00000513870 MIER1Q8N108 512 aa15.51■□□□□ 0.07
HMGN1P15-201ENST00000513870 CHRDL2Q6WN34 429 aa15.48■□□□□ 0.07
HMGN1P15-201ENST00000513870 PLEKHG5O94827 1062 aa15.44■□□□□ 0.06
HMGN1P15-201ENST00000513870 IFNLR1Q8IU57 520 aaPredicted RBP15.41■□□□□ 0.06
HMGN1P15-201ENST00000513870 KLHL34Q8N239 644 aa15.39■□□□□ 0.05
HMGN1P15-201ENST00000513870 CREBZFQ9NS37 354 aa15.38■□□□□ 0.05
HMGN1P15-201ENST00000513870 FXR2P51116 673 aaKnown RBP eCLIP15.34■□□□□ 0.05
HMGN1P15-201ENST00000513870 CHADLQ6NUI6 762 aa15.32■□□□□ 0.04
HMGN1P15-201ENST00000513870 PIP4P2Q8N4L2 257 aa15.31■□□□□ 0.04
HMGN1P15-201ENST00000513870 PRKAR2AP13861 404 aaKnown RBP15.3■□□□□ 0.04
HMGN1P15-201ENST00000513870 ZBTB47Q9UFB7 747 aaPredicted RBP15.3■□□□□ 0.04
HMGN1P15-201ENST00000513870 SPOCK2Q92563 424 aa15.23■□□□□ 0.03
HMGN1P15-201ENST00000513870 MNX1P50219 401 aaPredicted RBP15.21■□□□□ 0.03
HMGN1P15-201ENST00000513870 FARP1Q9Y4F1 1045 aaPredicted RBP15.17■□□□□ 0.02
HMGN1P15-201ENST00000513870 NPM1P06748 294 aaKnown RBP eCLIP15.15■□□□□ 0.02
HMGN1P15-201ENST00000513870 AMER1Q5JTC6 1135 aaPredicted RBP15.15■□□□□ 0.02
HMGN1P15-201ENST00000513870 RTN4Q9NQC3 1192 aaKnown RBP15.12■□□□□ 0.01
HMGN1P15-201ENST00000513870 NUBP1P53384 320 aa15.07■□□□□ 0
HMGN1P15-201ENST00000513870 CIZ1Q9ULV3 898 aaPredicted RBP15.02■□□□□ -0
HMGN1P15-201ENST00000513870 RASEFQ8IZ41 740 aa15.01□□□□□ -0.01
HMGN1P15-201ENST00000513870 FAM212AQ96EL1 285 aa14.99□□□□□ -0.01
HMGN1P15-201ENST00000513870 DCAF8Q5TAQ9 597 aa14.97□□□□□ -0.01
HMGN1P15-201ENST00000513870 GSE1Q14687 1217 aa14.95□□□□□ -0.02
HMGN1P15-201ENST00000513870 TSPYL2Q9H2G4 693 aaPredicted RBP14.93□□□□□ -0.02
HMGN1P15-201ENST00000513870 PKD2Q13563 968 aa14.92□□□□□ -0.02
HMGN1P15-201ENST00000513870 PAK3O75914 559 aaPredicted RBP14.9□□□□□ -0.02
HMGN1P15-201ENST00000513870 POTEHQ6S545 545 aa14.89□□□□□ -0.03
HMGN1P15-201ENST00000513870 CD44P16070 742 aaKnown RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms