RNA–Protein interactions for RNA: ENST00000513735.5

PAPD4-214, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

TSL 5

Gene PAPD4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-214ENST00000513735 AEBP2Q6ZN18 517 aaPredicted RBP25.56■■□□□ 1.68
PAPD4-214ENST00000513735 CHIC1Q5VXU3 224 aa24.72■■□□□ 1.55
PAPD4-214ENST00000513735 PHF23Q9BUL5 403 aaPredicted RBP21.76■■□□□ 1.07
PAPD4-214ENST00000513735 SENP3Q9H4L4 574 aaPredicted RBP21.65■■□□□ 1.06
PAPD4-214ENST00000513735 FOXD1Q16676 465 aa20.17■□□□□ 0.82
PAPD4-214ENST00000513735 PLPPR3Q6T4P5 718 aa19.94■□□□□ 0.78
PAPD4-214ENST00000513735 PPP6R1Q9UPN7 881 aa19.27■□□□□ 0.68
PAPD4-214ENST00000513735 ADRA2BP18089 450 aa19.22■□□□□ 0.67
PAPD4-214ENST00000513735 PIAS4Q8N2W9 510 aaPredicted RBP18.93■□□□□ 0.62
PAPD4-214ENST00000513735 MSH5O43196 834 aa18.62■□□□□ 0.57
PAPD4-214ENST00000513735 PPP4R3CPQ6ZMV5 832 aa17.57■□□□□ 0.4
PAPD4-214ENST00000513735 MAPK8IP2Q13387 824 aaPredicted RBP17.52■□□□□ 0.4
PAPD4-214ENST00000513735 SCAF1Q9H7N4 1312 aaKnown RBP17.49■□□□□ 0.39
PAPD4-214ENST00000513735 POTEDQ86YR6 584 aa17.39■□□□□ 0.37
PAPD4-214ENST00000513735 DMRT2Q9Y5R5 561 aa17.27■□□□□ 0.36
PAPD4-214ENST00000513735 CNKSR2Q8WXI2 1034 aa17.11■□□□□ 0.33
PAPD4-214ENST00000513735 NCBP3Q53F19 620 aaKnown RBP16.99■□□□□ 0.31
PAPD4-214ENST00000513735 KCNA4P22459 653 aa16.94■□□□□ 0.3
PAPD4-214ENST00000513735 HOXD11P31277 338 aaPredicted RBP16.84■□□□□ 0.29
PAPD4-214ENST00000513735 RNF216Q9NWF9 866 aaPredicted RBP16.83■□□□□ 0.28
PAPD4-214ENST00000513735 NPM3O75607 178 aaKnown RBP16.81■□□□□ 0.28
PAPD4-214ENST00000513735 DCAF8L1A6NGE4 600 aa16.5■□□□□ 0.23
PAPD4-214ENST00000513735 DNAJC5BQ9UF47 199 aa16.34■□□□□ 0.21
PAPD4-214ENST00000513735 SLC4A1APQ9BWU0 796 aaKnown RBP16.05■□□□□ 0.16
PAPD4-214ENST00000513735 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16■□□□□ 0.154e-6■□□□□ 11.1
PAPD4-214ENST00000513735 RNF39Q9H2S5 420 aa15.97■□□□□ 0.15
PAPD4-214ENST00000513735 SLC4A2P04920 1241 aa15.95■□□□□ 0.14
PAPD4-214ENST00000513735 U3KPZ7 1027 aaPredicted RBP15.78■□□□□ 0.12
PAPD4-214ENST00000513735 C1QBPQ07021 282 aaKnown RBP15.74■□□□□ 0.11
PAPD4-214ENST00000513735 CACNB1Q02641 598 aaPredicted RBP15.69■□□□□ 0.1
PAPD4-214ENST00000513735 FOXD4L1Q9NU39 408 aa15.62■□□□□ 0.09
PAPD4-214ENST00000513735 ZBTB22O15209 634 aa15.6■□□□□ 0.09
PAPD4-214ENST00000513735 EHMT2Q96KQ7 1210 aa15.58■□□□□ 0.08
PAPD4-214ENST00000513735 MYCNP04198 464 aaPredicted RBP15.5■□□□□ 0.07
PAPD4-214ENST00000513735 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.42■□□□□ 0.06
PAPD4-214ENST00000513735 HNRNPUL2Q1KMD3 747 aaKnown RBP15.42■□□□□ 0.06
PAPD4-214ENST00000513735 SPINK5Q9NQ38 1064 aaPredicted RBP15.4■□□□□ 0.06
PAPD4-214ENST00000513735 SAMD1Q6SPF0 538 aaPredicted RBP15.37■□□□□ 0.05
PAPD4-214ENST00000513735 CSRNP3Q8WYN3 585 aa15.33■□□□□ 0.04
PAPD4-214ENST00000513735 CAPN15O75808 1086 aa15.3■□□□□ 0.04
PAPD4-214ENST00000513735 APLP2Q06481 763 aa15.28■□□□□ 0.04
PAPD4-214ENST00000513735 TRHP20396 242 aaPredicted RBP15.19■□□□□ 0.02
PAPD4-214ENST00000513735 ATF5Q9Y2D1 282 aaPredicted RBP15.17■□□□□ 0.02
PAPD4-214ENST00000513735 ZNF219Q9P2Y4 722 aaPredicted RBP15.15■□□□□ 0.02
PAPD4-214ENST00000513735 DSG3P32926 999 aa15.14■□□□□ 0.01
PAPD4-214ENST00000513735 ATXN8OSP0DMR3 200 aa15.07■□□□□ 0
PAPD4-214ENST00000513735 ABCB7O75027 752 aa15.02■□□□□ -0
PAPD4-214ENST00000513735 POLA2Q14181 598 aa14.91□□□□□ -0.02
PAPD4-214ENST00000513735 ZBTB12Q9Y330 459 aaPredicted RBP14.58□□□□□ -0.08
PAPD4-214ENST00000513735 MKRN4PQ13434 485 aaPredicted RBP14.49□□□□□ -0.09
PAPD4-214ENST00000513735 FBLN2P98095 1184 aa14.45□□□□□ -0.1
PAPD4-214ENST00000513735 OSCARQ8IYS5 282 aa14.41□□□□□ -0.1
PAPD4-214ENST00000513735 RBM42Q9BTD8 480 aaKnown RBP14.37□□□□□ -0.11
PAPD4-214ENST00000513735 SPDYE2BA6NHP3 402 aa14.21□□□□□ -0.13
PAPD4-214ENST00000513735 SPDYE6P0CI01 402 aa14.21□□□□□ -0.13
PAPD4-214ENST00000513735 SPDYE2Q495Y8 402 aa14.21□□□□□ -0.13
PAPD4-214ENST00000513735 AKT1S1Q96B36 256 aa14.17□□□□□ -0.14
PAPD4-214ENST00000513735 ZNF692Q9BU19 519 aaPredicted RBP14.13□□□□□ -0.15
PAPD4-214ENST00000513735 SSUH2Q9Y2M2 353 aa14.1□□□□□ -0.15
PAPD4-214ENST00000513735 REM2Q8IYK8 340 aaPredicted RBP14.05□□□□□ -0.16
PAPD4-214ENST00000513735 SPDYE4A6NLX3 237 aa14.01□□□□□ -0.17
PAPD4-214ENST00000513735 PABPN1Q86U42 306 aaKnown RBP eCLIP13.95□□□□□ -0.18
PAPD4-214ENST00000513735 PITPNM1O00562 1244 aa13.9□□□□□ -0.18
PAPD4-214ENST00000513735 CHRDL2Q6WN34 429 aa13.89□□□□□ -0.19
PAPD4-214ENST00000513735 FKBP8Q14318 412 aa13.83□□□□□ -0.2
PAPD4-214ENST00000513735 SPDYE1Q8NFV5 336 aaPredicted RBP13.83□□□□□ -0.2
PAPD4-214ENST00000513735 CLEC11AQ9Y240 323 aa13.8□□□□□ -0.2
PAPD4-214ENST00000513735 PROM2Q8N271 834 aa13.78□□□□□ -0.2
PAPD4-214ENST00000513735 POTEHQ6S545 545 aa13.71□□□□□ -0.21
PAPD4-214ENST00000513735 FXR2P51116 673 aaKnown RBP eCLIP13.69□□□□□ -0.22
PAPD4-214ENST00000513735 PIP4P2Q8N4L2 257 aa13.69□□□□□ -0.22
PAPD4-214ENST00000513735 PRR29P0C7W0 189 aa13.64□□□□□ -0.23
PAPD4-214ENST00000513735 STAG3Q9UJ98 1225 aa13.63□□□□□ -0.23
PAPD4-214ENST00000513735 PRKAR2AP13861 404 aaKnown RBP13.54□□□□□ -0.24
PAPD4-214ENST00000513735 CHADLQ6NUI6 762 aa13.52□□□□□ -0.25
PAPD4-214ENST00000513735 CREBZFQ9NS37 354 aa13.45□□□□□ -0.26
PAPD4-214ENST00000513735 RTN4Q9NQC3 1192 aaKnown RBP13.36□□□□□ -0.27
PAPD4-214ENST00000513735 FBXO3Q9UK99 471 aa13.35□□□□□ -0.27
PAPD4-214ENST00000513735 FARP1Q9Y4F1 1045 aaPredicted RBP13.35□□□□□ -0.27
PAPD4-214ENST00000513735 MNX1P50219 401 aaPredicted RBP13.3□□□□□ -0.28
PAPD4-214ENST00000513735 MIER1Q8N108 512 aa13.3□□□□□ -0.28
PAPD4-214ENST00000513735 HAX1O00165 279 aa13.28□□□□□ -0.28
PAPD4-214ENST00000513735 AMER1Q5JTC6 1135 aaPredicted RBP13.28□□□□□ -0.28
PAPD4-214ENST00000513735 PLCD3Q8N3E9 789 aa13.24□□□□□ -0.29
PAPD4-214ENST00000513735 C19orf67A6NJJ6 358 aa13.23□□□□□ -0.29
PAPD4-214ENST00000513735 VASPP50552 380 aaPredicted RBP13.22□□□□□ -0.29
PAPD4-214ENST00000513735 EVX2Q03828 476 aa13.22□□□□□ -0.29
PAPD4-214ENST00000513735 PLEKHG5O94827 1062 aa13.19□□□□□ -0.3
PAPD4-214ENST00000513735 NPM1P06748 294 aaKnown RBP eCLIP13.16□□□□□ -0.3
PAPD4-214ENST00000513735 CD44P16070 742 aaKnown RBP13.13□□□□□ -0.31
PAPD4-214ENST00000513735 SP7Q8TDD2 431 aaPredicted RBP13.08□□□□□ -0.32
PAPD4-214ENST00000513735 ZBTB47Q9UFB7 747 aaPredicted RBP13.07□□□□□ -0.32
PAPD4-214ENST00000513735 IFNLR1Q8IU57 520 aaPredicted RBP13.05□□□□□ -0.32
PAPD4-214ENST00000513735 ZRANB1Q9UGI0 708 aa13.03□□□□□ -0.32
PAPD4-214ENST00000513735 NUBP1P53384 320 aa13.02□□□□□ -0.33
PAPD4-214ENST00000513735 RASEFQ8IZ41 740 aa13.01□□□□□ -0.33
PAPD4-214ENST00000513735 KLHL34Q8N239 644 aa13.01□□□□□ -0.33
PAPD4-214ENST00000513735 TSPYL2Q9H2G4 693 aaPredicted RBP12.98□□□□□ -0.33
PAPD4-214ENST00000513735 PAK3O75914 559 aaPredicted RBP12.97□□□□□ -0.33
PAPD4-214ENST00000513735 ZNF579Q8NAF0 562 aaKnown RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms