RNA–Protein interactions for RNA: ENST00000512748.1

AC109454.3-201, humanhuman

TSL 3 BASIC

Gene AC109454.3, Length 669 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC109454.3-201ENST00000512748 AEBP2Q6ZN18 517 aaPredicted RBP20.46■□□□□ 0.87
AC109454.3-201ENST00000512748 CHIC1Q5VXU3 224 aa19.16■□□□□ 0.66
AC109454.3-201ENST00000512748 SENP3Q9H4L4 574 aaPredicted RBP17.44■□□□□ 0.38
AC109454.3-201ENST00000512748 PHF23Q9BUL5 403 aaPredicted RBP17.18■□□□□ 0.34
AC109454.3-201ENST00000512748 FOXD1Q16676 465 aa16.31■□□□□ 0.2
AC109454.3-201ENST00000512748 POTEDQ86YR6 584 aa15.41■□□□□ 0.06
AC109454.3-201ENST00000512748 MSH5O43196 834 aa15.33■□□□□ 0.04
AC109454.3-201ENST00000512748 PLPPR3Q6T4P5 718 aa15.16■□□□□ 0.02
AC109454.3-201ENST00000512748 PIAS4Q8N2W9 510 aaPredicted RBP15.13■□□□□ 0.01
AC109454.3-201ENST00000512748 PPP6R1Q9UPN7 881 aa15.07■□□□□ 0
AC109454.3-201ENST00000512748 ADRA2BP18089 450 aa14.97□□□□□ -0.01
AC109454.3-201ENST00000512748 MAPK8IP2Q13387 824 aaPredicted RBP13.83□□□□□ -0.2
AC109454.3-201ENST00000512748 DMRT2Q9Y5R5 561 aa13.82□□□□□ -0.2
AC109454.3-201ENST00000512748 SCAF1Q9H7N4 1312 aaKnown RBP13.65□□□□□ -0.22
AC109454.3-201ENST00000512748 CACNB1Q02641 598 aaPredicted RBP13.27□□□□□ -0.29
AC109454.3-201ENST00000512748 PPP4R3CPQ6ZMV5 832 aa13.26□□□□□ -0.29
AC109454.3-201ENST00000512748 HOXD11P31277 338 aaPredicted RBP13.23□□□□□ -0.29
AC109454.3-201ENST00000512748 DCAF8L1A6NGE4 600 aa13.13□□□□□ -0.31
AC109454.3-201ENST00000512748 RNF39Q9H2S5 420 aa13.1□□□□□ -0.31
AC109454.3-201ENST00000512748 CNKSR2Q8WXI2 1034 aa13.07□□□□□ -0.32
AC109454.3-201ENST00000512748 RNF216Q9NWF9 866 aaPredicted RBP13.03□□□□□ -0.32
AC109454.3-201ENST00000512748 C1QBPQ07021 282 aaKnown RBP12.86□□□□□ -0.35
AC109454.3-201ENST00000512748 DNAJC5BQ9UF47 199 aa12.86□□□□□ -0.35
AC109454.3-201ENST00000512748 NCBP3Q53F19 620 aaKnown RBP12.64□□□□□ -0.39
AC109454.3-201ENST00000512748 NPM3O75607 178 aaKnown RBP12.51□□□□□ -0.41
AC109454.3-201ENST00000512748 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.5□□□□□ -0.41
AC109454.3-201ENST00000512748 KCNA4P22459 653 aa12.38□□□□□ -0.43
AC109454.3-201ENST00000512748 U3KPZ7 1027 aaPredicted RBP12.3□□□□□ -0.44
AC109454.3-201ENST00000512748 DSG3P32926 999 aa12.17□□□□□ -0.46
AC109454.3-201ENST00000512748 SPINK5Q9NQ38 1064 aaPredicted RBP12.17□□□□□ -0.46
AC109454.3-201ENST00000512748 CAPN15O75808 1086 aa12.1□□□□□ -0.47
AC109454.3-201ENST00000512748 SLC4A2P04920 1241 aa12.04□□□□□ -0.48
AC109454.3-201ENST00000512748 POTEHQ6S545 545 aa12.01□□□□□ -0.49
AC109454.3-201ENST00000512748 APLP2Q06481 763 aa11.85□□□□□ -0.51
AC109454.3-201ENST00000512748 ZNF219Q9P2Y4 722 aaPredicted RBP11.85□□□□□ -0.51
AC109454.3-201ENST00000512748 TRHP20396 242 aaPredicted RBP11.84□□□□□ -0.51
AC109454.3-201ENST00000512748 SLC4A1APQ9BWU0 796 aaKnown RBP11.82□□□□□ -0.52
AC109454.3-201ENST00000512748 ABCB7O75027 752 aa11.81□□□□□ -0.52
AC109454.3-201ENST00000512748 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.79□□□□□ -0.52
AC109454.3-201ENST00000512748 HNRNPUL2Q1KMD3 747 aaKnown RBP11.79□□□□□ -0.52
AC109454.3-201ENST00000512748 EHMT2Q96KQ7 1210 aa11.76□□□□□ -0.53
AC109454.3-201ENST00000512748 SAMD1Q6SPF0 538 aaPredicted RBP11.73□□□□□ -0.53
AC109454.3-201ENST00000512748 CSRNP3Q8WYN3 585 aa11.57□□□□□ -0.56
AC109454.3-201ENST00000512748 RBM42Q9BTD8 480 aaKnown RBP11.57□□□□□ -0.56
AC109454.3-201ENST00000512748 MYCNP04198 464 aaPredicted RBP11.56□□□□□ -0.56
AC109454.3-201ENST00000512748 POLA2Q14181 598 aa11.5□□□□□ -0.57
AC109454.3-201ENST00000512748 CHRDL2Q6WN34 429 aa11.43□□□□□ -0.58
AC109454.3-201ENST00000512748 ZBTB22O15209 634 aa11.4□□□□□ -0.58
AC109454.3-201ENST00000512748 ATF5Q9Y2D1 282 aaPredicted RBP11.34□□□□□ -0.59
AC109454.3-201ENST00000512748 FOXD4L1Q9NU39 408 aa11.3□□□□□ -0.6
AC109454.3-201ENST00000512748 AKT1S1Q96B36 256 aa11.28□□□□□ -0.6
AC109454.3-201ENST00000512748 ZBTB12Q9Y330 459 aaPredicted RBP11.25□□□□□ -0.61
AC109454.3-201ENST00000512748 REM2Q8IYK8 340 aaPredicted RBP11.17□□□□□ -0.62
AC109454.3-201ENST00000512748 OSCARQ8IYS5 282 aa11.15□□□□□ -0.62
AC109454.3-201ENST00000512748 SP7Q8TDD2 431 aaPredicted RBP11.14□□□□□ -0.63
AC109454.3-201ENST00000512748 PIP4P2Q8N4L2 257 aa11.13□□□□□ -0.63
AC109454.3-201ENST00000512748 PITPNM1O00562 1244 aa11.06□□□□□ -0.64
AC109454.3-201ENST00000512748 FXR2P51116 673 aaKnown RBP eCLIP11.04□□□□□ -0.64
AC109454.3-201ENST00000512748 ATXN8OSP0DMR3 200 aa11.01□□□□□ -0.65
AC109454.3-201ENST00000512748 HAX1O00165 279 aa10.92□□□□□ -0.66
AC109454.3-201ENST00000512748 SPDYE2BA6NHP3 402 aa10.9□□□□□ -0.66
AC109454.3-201ENST00000512748 SPDYE6P0CI01 402 aa10.9□□□□□ -0.66
AC109454.3-201ENST00000512748 SPDYE2Q495Y8 402 aa10.9□□□□□ -0.66
AC109454.3-201ENST00000512748 EVX2Q03828 476 aa10.85□□□□□ -0.67
AC109454.3-201ENST00000512748 FBLN2P98095 1184 aa10.83□□□□□ -0.68
AC109454.3-201ENST00000512748 MKRN4PQ13434 485 aaPredicted RBP10.82□□□□□ -0.68
AC109454.3-201ENST00000512748 SSUH2Q9Y2M2 353 aa10.77□□□□□ -0.69
AC109454.3-201ENST00000512748 SPDYE1Q8NFV5 336 aaPredicted RBP10.75□□□□□ -0.69
AC109454.3-201ENST00000512748 PRKAR2AP13861 404 aaKnown RBP10.74□□□□□ -0.69
AC109454.3-201ENST00000512748 C19orf67A6NJJ6 358 aa10.7□□□□□ -0.7
AC109454.3-201ENST00000512748 ZNF692Q9BU19 519 aaPredicted RBP10.69□□□□□ -0.7
AC109454.3-201ENST00000512748 CLEC11AQ9Y240 323 aa10.69□□□□□ -0.7
AC109454.3-201ENST00000512748 GABBR2O75899 941 aa10.57□□□□□ -0.72
AC109454.3-201ENST00000512748 CHADLQ6NUI6 762 aa10.57□□□□□ -0.72
AC109454.3-201ENST00000512748 PABPN1Q86U42 306 aaKnown RBP eCLIP10.54□□□□□ -0.72
AC109454.3-201ENST00000512748 PRR29P0C7W0 189 aa10.5□□□□□ -0.73
AC109454.3-201ENST00000512748 LHX8Q68G74 356 aa10.43□□□□□ -0.74
AC109454.3-201ENST00000512748 FKBP8Q14318 412 aa10.4□□□□□ -0.74
AC109454.3-201ENST00000512748 FARP1Q9Y4F1 1045 aaPredicted RBP10.4□□□□□ -0.74
AC109454.3-201ENST00000512748 POTEIP0CG38 1075 aa10.39□□□□□ -0.75
AC109454.3-201ENST00000512748 CD44P16070 742 aaKnown RBP10.38□□□□□ -0.75
AC109454.3-201ENST00000512748 CLCN6P51797 869 aa10.32□□□□□ -0.76
AC109454.3-201ENST00000512748 ZNF579Q8NAF0 562 aaKnown RBP10.26□□□□□ -0.77
AC109454.3-201ENST00000512748 CREBZFQ9NS37 354 aa10.25□□□□□ -0.77
AC109454.3-201ENST00000512748 STAG3Q9UJ98 1225 aa10.19□□□□□ -0.78
AC109454.3-201ENST00000512748 ZRANB1Q9UGI0 708 aa10.18□□□□□ -0.78
AC109454.3-201ENST00000512748 DCBLD2Q96PD2 775 aa10.17□□□□□ -0.78
AC109454.3-201ENST00000512748 SPDYE4A6NLX3 237 aa10.15□□□□□ -0.78
AC109454.3-201ENST00000512748 GALR2O43603 387 aaPredicted RBP10.12□□□□□ -0.79
AC109454.3-201ENST00000512748 MNX1P50219 401 aaPredicted RBP10.08□□□□□ -0.8
AC109454.3-201ENST00000512748 PROM2Q8N271 834 aa10.05□□□□□ -0.8
AC109454.3-201ENST00000512748 PHF12Q96QT6 1004 aa10.05□□□□□ -0.8
AC109454.3-201ENST00000512748 POTEB2H3BUK9 544 aa10.03□□□□□ -0.8
AC109454.3-201ENST00000512748 OTUD5Q96G74 571 aa10.03□□□□□ -0.8
AC109454.3-201ENST00000512748 PAK3O75914 559 aaPredicted RBP10.01□□□□□ -0.81
AC109454.3-201ENST00000512748 NPM1P06748 294 aaKnown RBP eCLIP9.99□□□□□ -0.81
AC109454.3-201ENST00000512748 PELP1Q8IZL8 1130 aaKnown RBP9.98□□□□□ -0.81
AC109454.3-201ENST00000512748 FBXO3Q9UK99 471 aa9.96□□□□□ -0.82
AC109454.3-201ENST00000512748 RTN4Q9NQC3 1192 aaKnown RBP9.94□□□□□ -0.82
AC109454.3-201ENST00000512748 AMER1Q5JTC6 1135 aaPredicted RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms