RNA–Protein interactions for RNA: ENST00000512215.5

PPP3CA-207, Transcript of protein phosphatase 3 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP3CA, Length 4,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CA-207ENST00000512215 NISCHQ9Y2I1 1504 aa30.21■■■□□ 2.43
PPP3CA-207ENST00000512215 DCAF8L2P0C7V8 631 aa28.41■■■□□ 2.14
PPP3CA-207ENST00000512215 SHROOM4Q9ULL8 1493 aa27.67■■■□□ 2.02
PPP3CA-207ENST00000512215 SUPT5HO00267 1087 aaKnown RBP27.36■■□□□ 1.97
PPP3CA-207ENST00000512215 EHMT2Q96KQ7 1210 aa26.07■■□□□ 1.76
PPP3CA-207ENST00000512215 FAM9AQ8IZU1 332 aaPredicted RBP25.64■■□□□ 1.7
PPP3CA-207ENST00000512215 ABCC9O60706 1549 aa25.49■■□□□ 1.67
PPP3CA-207ENST00000512215 CHIC1Q5VXU3 224 aa25.21■■□□□ 1.63
PPP3CA-207ENST00000512215 ZCCHC6Q5VYS8 1495 aaKnown RBP25.19■■□□□ 1.62
PPP3CA-207ENST00000512215 TRIM41Q8WV44 630 aa25.15■■□□□ 1.62
PPP3CA-207ENST00000512215 PCGF6Q9BYE7 350 aa25.11■■□□□ 1.61
PPP3CA-207ENST00000512215 LOC105371045A0A1W2PR82 267 aa25.08■■□□□ 1.61
PPP3CA-207ENST00000512215 PELP1Q8IZL8 1130 aaKnown RBP25.04■■□□□ 1.6
PPP3CA-207ENST00000512215 TTBK1Q5TCY1 1321 aaPredicted RBP25.03■■□□□ 1.6
PPP3CA-207ENST00000512215 PABPN1Q86U42 306 aaKnown RBP eCLIP24.99■■□□□ 1.59
PPP3CA-207ENST00000512215 CCDC180Q9P1Z9 1646 aa24.95■■□□□ 1.59
PPP3CA-207ENST00000512215 RANGAP1P46060 587 aaPredicted RBP24.82■■□□□ 1.56
PPP3CA-207ENST00000512215 MYT1Q01538 1121 aa24.79■■□□□ 1.56
PPP3CA-207ENST00000512215 PPARGC1BQ86YN6 1023 aaKnown RBP24.79■■□□□ 1.56
PPP3CA-207ENST00000512215 SCRIBQ14160 1630 aa24.71■■□□□ 1.55
PPP3CA-207ENST00000512215 SLC24A1O60721 1099 aa24.58■■□□□ 1.53
PPP3CA-207ENST00000512215 UBTFP17480 764 aaKnown RBP24.47■■□□□ 1.51
PPP3CA-207ENST00000512215 APLP2Q06481 763 aa24.2■■□□□ 1.46
PPP3CA-207ENST00000512215 MYO15BQ96JP2 1530 aa24.2■■□□□ 1.46
PPP3CA-207ENST00000512215 RSF1Q96T23 1441 aaPredicted RBP24.11■■□□□ 1.45
PPP3CA-207ENST00000512215 TRIM26Q12899 539 aaPredicted RBP24.06■■□□□ 1.44
PPP3CA-207ENST00000512215 CECR2Q9BXF3 1484 aa24.03■■□□□ 1.44
PPP3CA-207ENST00000512215 ATP1B4Q9UN42 357 aaPredicted RBP24.02■■□□□ 1.44
PPP3CA-207ENST00000512215 HRCP23327 699 aa23.97■■□□□ 1.43
PPP3CA-207ENST00000512215 CCER1Q8TC90 406 aaPredicted RBP23.97■■□□□ 1.43
PPP3CA-207ENST00000512215 DCAF1Q9Y4B6 1507 aa23.96■■□□□ 1.43
PPP3CA-207ENST00000512215 NACADO15069 1562 aa23.82■■□□□ 1.4
PPP3CA-207ENST00000512215 RB1CC1Q8TDY2 1594 aa23.81■■□□□ 1.4
PPP3CA-207ENST00000512215 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.72■■□□□ 1.39
PPP3CA-207ENST00000512215 HNRNPUL2Q1KMD3 747 aaKnown RBP23.71■■□□□ 1.39
PPP3CA-207ENST00000512215 MROH2BQ7Z745 1585 aa23.66■■□□□ 1.38
PPP3CA-207ENST00000512215 ITGAEP38570 1179 aa23.66■■□□□ 1.38
PPP3CA-207ENST00000512215 CSRNP3Q8WYN3 585 aa23.61■■□□□ 1.37
PPP3CA-207ENST00000512215 ZEB1P37275 1124 aaPredicted RBP23.53■■□□□ 1.36
PPP3CA-207ENST00000512215 WIZO95785 1651 aa23.38■■□□□ 1.33
PPP3CA-207ENST00000512215 P3H3Q8IVL6 736 aa23.36■■□□□ 1.33
PPP3CA-207ENST00000512215 BAZ1AQ9NRL2 1556 aaPredicted RBP23.34■■□□□ 1.33
PPP3CA-207ENST00000512215 ABCC8Q09428 1581 aa23.21■■□□□ 1.31
PPP3CA-207ENST00000512215 CCDC88BA6NC98 1476 aa23.21■■□□□ 1.31
PPP3CA-207ENST00000512215 YTHDC1Q96MU7 727 aaKnown RBP23.2■■□□□ 1.3
PPP3CA-207ENST00000512215 BAZ1BQ9UIG0 1483 aaKnown RBP23.18■■□□□ 1.3
PPP3CA-207ENST00000512215 SOGA1O94964 1423 aa23.17■■□□□ 1.3
PPP3CA-207ENST00000512215 ARID3CA6NKF2 412 aa23.13■■□□□ 1.29
PPP3CA-207ENST00000512215 WRNQ14191 1432 aaPredicted RBP eCLIP23.12■■□□□ 1.29
PPP3CA-207ENST00000512215 FAM50AQ14320 339 aaKnown RBP23.07■■□□□ 1.28
PPP3CA-207ENST00000512215 FBLN2P98095 1184 aa23■■□□□ 1.27
PPP3CA-207ENST00000512215 CEP162Q5TB80 1403 aa22.97■■□□□ 1.27
PPP3CA-207ENST00000512215 SMARCA4P51532 1647 aa22.91■■□□□ 1.26
PPP3CA-207ENST00000512215 RUSC2Q8N2Y8 1516 aa22.87■■□□□ 1.25
PPP3CA-207ENST00000512215 TOP2AP11388 1531 aaKnown RBP22.87■■□□□ 1.25
PPP3CA-207ENST00000512215 CLIP1P30622 1438 aa22.86■■□□□ 1.25
PPP3CA-207ENST00000512215 DIEXFQ68CQ4 756 aaKnown RBP22.84■■□□□ 1.25
PPP3CA-207ENST00000512215 NEUROD1Q13562 356 aa22.82■■□□□ 1.24
PPP3CA-207ENST00000512215 ATAD2BQ9ULI0 1458 aa22.81■■□□□ 1.24
PPP3CA-207ENST00000512215 ERICH6Q7L0X2 663 aa22.79■■□□□ 1.24
PPP3CA-207ENST00000512215 GOLGA3Q08378 1498 aa22.76■■□□□ 1.23
PPP3CA-207ENST00000512215 CENPBP07199 599 aaPredicted RBP22.76■■□□□ 1.23
PPP3CA-207ENST00000512215 TNIKQ9UKE5 1360 aa22.74■■□□□ 1.23
PPP3CA-207ENST00000512215 PRKCSHP14314 528 aaPredicted RBP22.72■■□□□ 1.23
PPP3CA-207ENST00000512215 CNGB1Q14028 1251 aaPredicted RBP22.7■■□□□ 1.22
PPP3CA-207ENST00000512215 EEA1Q15075 1411 aa22.67■■□□□ 1.22
PPP3CA-207ENST00000512215 SMARCA2P51531 1590 aa22.66■■□□□ 1.22
PPP3CA-207ENST00000512215 CEP164Q9UPV0 1460 aa22.6■■□□□ 1.21
PPP3CA-207ENST00000512215 TRIM52Q96A61 297 aa22.6■■□□□ 1.21
PPP3CA-207ENST00000512215 DAXXQ9UER7 740 aaPredicted RBP22.59■■□□□ 1.21
PPP3CA-207ENST00000512215 KIF27Q86VH2 1401 aa22.58■■□□□ 1.21
PPP3CA-207ENST00000512215 POLR3GLQ9BT43 218 aa22.56■■□□□ 1.2
PPP3CA-207ENST00000512215 CUX2O14529 1486 aa22.54■■□□□ 1.2
PPP3CA-207ENST00000512215 ZNF316A6NFI3 1004 aaPredicted RBP22.51■■□□□ 1.19
PPP3CA-207ENST00000512215 KANK4Q5T7N3 995 aaPredicted RBP22.5■■□□□ 1.19
PPP3CA-207ENST00000512215 CHIC2Q9UKJ5 165 aa22.48■■□□□ 1.19
PPP3CA-207ENST00000512215 MYT1LQ9UL68 1186 aa22.48■■□□□ 1.19
PPP3CA-207ENST00000512215 RAPGEF2Q9Y4G8 1499 aa22.48■■□□□ 1.19
PPP3CA-207ENST00000512215 BICRAQ9NZM4 1560 aa22.47■■□□□ 1.19
PPP3CA-207ENST00000512215 ZNF777Q9ULD5 760 aaPredicted RBP22.47■■□□□ 1.19
PPP3CA-207ENST00000512215 TDRD9Q8NDG6 1382 aaKnown RBP22.41■■□□□ 1.18
PPP3CA-207ENST00000512215 CARMIL1Q5VZK9 1371 aa22.41■■□□□ 1.18
PPP3CA-207ENST00000512215 DNAJC5BQ9UF47 199 aa22.39■■□□□ 1.17
PPP3CA-207ENST00000512215 CADPSQ9ULU8 1353 aa22.39■■□□□ 1.17
PPP3CA-207ENST00000512215 HIRIP3Q9BW71 556 aaPredicted RBP22.35■■□□□ 1.17
PPP3CA-207ENST00000512215 ZNF326Q5BKZ1 582 aaKnown RBP22.34■■□□□ 1.17
PPP3CA-207ENST00000512215 EIF4G1Q04637 1599 aaKnown RBP22.34■■□□□ 1.17
PPP3CA-207ENST00000512215 BCL11AQ9H165 835 aa22.32■■□□□ 1.16
PPP3CA-207ENST00000512215 CHMP7Q8WUX9 453 aaPredicted RBP22.31■■□□□ 1.16
PPP3CA-207ENST00000512215 SCAF1Q9H7N4 1312 aaKnown RBP22.3■■□□□ 1.16
PPP3CA-207ENST00000512215 UNC13AQ9UPW8 1703 aa22.29■■□□□ 1.16
PPP3CA-207ENST00000512215 MTUS2Q5JR59 1369 aa22.29■■□□□ 1.16
PPP3CA-207ENST00000512215 VPS8Q8N3P4 1428 aa22.28■■□□□ 1.16
PPP3CA-207ENST00000512215 RRP7BPQ9NSQ0 103 aa22.25■■□□□ 1.15
PPP3CA-207ENST00000512215 SYNJ1O43426 1573 aa22.24■■□□□ 1.15
PPP3CA-207ENST00000512215 NCAPD3P42695 1498 aa22.22■■□□□ 1.15
PPP3CA-207ENST00000512215 GTF3C3Q9Y5Q9 886 aa22.21■■□□□ 1.15
PPP3CA-207ENST00000512215 MIER1Q8N108 512 aa22.17■■□□□ 1.14
PPP3CA-207ENST00000512215 SIN3AQ96ST3 1273 aa22.16■■□□□ 1.14
PPP3CA-207ENST00000512215 NESP48681 1621 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms