RNA–Protein interactions for RNA: ENST00000511778.5

DROSHA-213, Transcript of drosha ribonuclease III, humanhuman

TSL 3

Gene DROSHA, Length 1,261 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DROSHA-213ENST00000511778 AEBP2Q6ZN18 517 aaPredicted RBP29.2■■■□□ 2.26
DROSHA-213ENST00000511778 CHIC1Q5VXU3 224 aa27.44■■□□□ 1.98
DROSHA-213ENST00000511778 SENP3Q9H4L4 574 aaPredicted RBP25.01■■□□□ 1.59
DROSHA-213ENST00000511778 PHF23Q9BUL5 403 aaPredicted RBP24.64■■□□□ 1.54
DROSHA-213ENST00000511778 FOXD1Q16676 465 aa23.33■■□□□ 1.33
DROSHA-213ENST00000511778 POTEDQ86YR6 584 aa22.02■■□□□ 1.12
DROSHA-213ENST00000511778 MSH5O43196 834 aa22■■□□□ 1.11
DROSHA-213ENST00000511778 PLPPR3Q6T4P5 718 aa21.78■■□□□ 1.08
DROSHA-213ENST00000511778 PIAS4Q8N2W9 510 aaPredicted RBP21.73■■□□□ 1.07
DROSHA-213ENST00000511778 PPP6R1Q9UPN7 881 aa21.54■■□□□ 1.04
DROSHA-213ENST00000511778 ADRA2BP18089 450 aa21.46■■□□□ 1.03
DROSHA-213ENST00000511778 MAPK8IP2Q13387 824 aaPredicted RBP19.81■□□□□ 0.76
DROSHA-213ENST00000511778 DMRT2Q9Y5R5 561 aa19.76■□□□□ 0.75
DROSHA-213ENST00000511778 SCAF1Q9H7N4 1312 aaKnown RBP19.7■□□□□ 0.74
DROSHA-213ENST00000511778 CACNB1Q02641 598 aaPredicted RBP19.09■□□□□ 0.65
DROSHA-213ENST00000511778 PPP4R3CPQ6ZMV5 832 aa19.05■□□□□ 0.64
DROSHA-213ENST00000511778 DCAF8L1A6NGE4 600 aa18.99■□□□□ 0.63
DROSHA-213ENST00000511778 HOXD11P31277 338 aaPredicted RBP18.91■□□□□ 0.62
DROSHA-213ENST00000511778 CNKSR2Q8WXI2 1034 aa18.78■□□□□ 0.6
DROSHA-213ENST00000511778 RNF39Q9H2S5 420 aa18.71■□□□□ 0.59
DROSHA-213ENST00000511778 RNF216Q9NWF9 866 aaPredicted RBP18.69■□□□□ 0.58
DROSHA-213ENST00000511778 C1QBPQ07021 282 aaKnown RBP18.44■□□□□ 0.54
DROSHA-213ENST00000511778 DNAJC5BQ9UF47 199 aa18.34■□□□□ 0.53
DROSHA-213ENST00000511778 NCBP3Q53F19 620 aaKnown RBP18.24■□□□□ 0.51
DROSHA-213ENST00000511778 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.03■□□□□ 0.48
DROSHA-213ENST00000511778 NPM3O75607 178 aaKnown RBP17.93■□□□□ 0.46
DROSHA-213ENST00000511778 U3KPZ7 1027 aaPredicted RBP17.59■□□□□ 0.41
DROSHA-213ENST00000511778 CAPN15O75808 1086 aa17.45■□□□□ 0.38
DROSHA-213ENST00000511778 SPINK5Q9NQ38 1064 aaPredicted RBP17.43■□□□□ 0.38
DROSHA-213ENST00000511778 DSG3P32926 999 aa17.41■□□□□ 0.38
DROSHA-213ENST00000511778 KCNA4P22459 653 aa17.27■□□□□ 0.36
DROSHA-213ENST00000511778 SLC4A2P04920 1241 aa17.21■□□□□ 0.35
DROSHA-213ENST00000511778 POTEHQ6S545 545 aa17.2■□□□□ 0.34
DROSHA-213ENST00000511778 APLP2Q06481 763 aa17.12■□□□□ 0.33
DROSHA-213ENST00000511778 TRHP20396 242 aaPredicted RBP17.09■□□□□ 0.33
DROSHA-213ENST00000511778 ZNF219Q9P2Y4 722 aaPredicted RBP17.05■□□□□ 0.32
DROSHA-213ENST00000511778 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.01■□□□□ 0.31
DROSHA-213ENST00000511778 HNRNPUL2Q1KMD3 747 aaKnown RBP17.01■□□□□ 0.31
DROSHA-213ENST00000511778 ABCB7O75027 752 aa17■□□□□ 0.31
DROSHA-213ENST00000511778 SAMD1Q6SPF0 538 aaPredicted RBP16.89■□□□□ 0.29
DROSHA-213ENST00000511778 RBM42Q9BTD8 480 aaKnown RBP16.66■□□□□ 0.26
DROSHA-213ENST00000511778 MYCNP04198 464 aaPredicted RBP16.61■□□□□ 0.25
DROSHA-213ENST00000511778 POLA2Q14181 598 aa16.55■□□□□ 0.24
DROSHA-213ENST00000511778 CHRDL2Q6WN34 429 aa16.4■□□□□ 0.22
DROSHA-213ENST00000511778 SLC4A1APQ9BWU0 796 aaKnown RBP16.26■□□□□ 0.19
DROSHA-213ENST00000511778 FOXD4L1Q9NU39 408 aa16.25■□□□□ 0.19
DROSHA-213ENST00000511778 ATF5Q9Y2D1 282 aaPredicted RBP16.22■□□□□ 0.19
DROSHA-213ENST00000511778 AKT1S1Q96B36 256 aa16.2■□□□□ 0.18
DROSHA-213ENST00000511778 ZBTB12Q9Y330 459 aaPredicted RBP16.2■□□□□ 0.18
DROSHA-213ENST00000511778 REM2Q8IYK8 340 aaPredicted RBP16.02■□□□□ 0.16
DROSHA-213ENST00000511778 OSCARQ8IYS5 282 aa16■□□□□ 0.15
DROSHA-213ENST00000511778 SP7Q8TDD2 431 aaPredicted RBP15.96■□□□□ 0.15
DROSHA-213ENST00000511778 PIP4P2Q8N4L2 257 aa15.93■□□□□ 0.14
DROSHA-213ENST00000511778 PITPNM1O00562 1244 aa15.85■□□□□ 0.13
DROSHA-213ENST00000511778 ZBTB22O15209 634 aa15.84■□□□□ 0.13
DROSHA-213ENST00000511778 ATXN8OSP0DMR3 200 aa15.8■□□□□ 0.12
DROSHA-213ENST00000511778 FXR2P51116 673 aaKnown RBP eCLIP15.79■□□□□ 0.122e-8■■■■■ 27.8
DROSHA-213ENST00000511778 HAX1O00165 279 aa15.76■□□□□ 0.11
DROSHA-213ENST00000511778 SPDYE2BA6NHP3 402 aa15.67■□□□□ 0.1
DROSHA-213ENST00000511778 SPDYE6P0CI01 402 aa15.67■□□□□ 0.1
DROSHA-213ENST00000511778 FBLN2P98095 1184 aa15.67■□□□□ 0.1
DROSHA-213ENST00000511778 SPDYE2Q495Y8 402 aa15.67■□□□□ 0.1
DROSHA-213ENST00000511778 EVX2Q03828 476 aa15.5■□□□□ 0.07
DROSHA-213ENST00000511778 SPDYE1Q8NFV5 336 aaPredicted RBP15.49■□□□□ 0.07
DROSHA-213ENST00000511778 CLEC11AQ9Y240 323 aa15.48■□□□□ 0.07
DROSHA-213ENST00000511778 MKRN4PQ13434 485 aaPredicted RBP15.46■□□□□ 0.07
DROSHA-213ENST00000511778 PRKAR2AP13861 404 aaKnown RBP15.45■□□□□ 0.06
DROSHA-213ENST00000511778 ZNF692Q9BU19 519 aaPredicted RBP15.43■□□□□ 0.06
DROSHA-213ENST00000511778 SSUH2Q9Y2M2 353 aa15.39■□□□□ 0.05
DROSHA-213ENST00000511778 C19orf67A6NJJ6 358 aa15.3■□□□□ 0.04
DROSHA-213ENST00000511778 CHADLQ6NUI6 762 aa15.19■□□□□ 0.02
DROSHA-213ENST00000511778 PABPN1Q86U42 306 aaKnown RBP eCLIP15.18■□□□□ 0.021e-6■■■■□ 24.5
DROSHA-213ENST00000511778 PRR29P0C7W0 189 aa15.17■□□□□ 0.02
DROSHA-213ENST00000511778 GABBR2O75899 941 aa15.16■□□□□ 0.02
DROSHA-213ENST00000511778 LHX8Q68G74 356 aa14.98□□□□□ -0.01
DROSHA-213ENST00000511778 CD44P16070 742 aaKnown RBP14.94□□□□□ -0.02
DROSHA-213ENST00000511778 FARP1Q9Y4F1 1045 aaPredicted RBP14.94□□□□□ -0.02
DROSHA-213ENST00000511778 CLCN6P51797 869 aa14.85□□□□□ -0.03
DROSHA-213ENST00000511778 CSRNP3Q8WYN3 585 aa14.84□□□□□ -0.03
DROSHA-213ENST00000511778 POTEIP0CG38 1075 aa14.81□□□□□ -0.04
DROSHA-213ENST00000511778 STAG3Q9UJ98 1225 aa14.73□□□□□ -0.05
DROSHA-213ENST00000511778 DCBLD2Q96PD2 775 aa14.7□□□□□ -0.06
DROSHA-213ENST00000511778 ZNF579Q8NAF0 562 aaKnown RBP14.69□□□□□ -0.06
DROSHA-213ENST00000511778 CREBZFQ9NS37 354 aa14.69□□□□□ -0.06
DROSHA-213ENST00000511778 ZRANB1Q9UGI0 708 aa14.69□□□□□ -0.06
DROSHA-213ENST00000511778 SPDYE4A6NLX3 237 aa14.58□□□□□ -0.08
DROSHA-213ENST00000511778 GALR2O43603 387 aaPredicted RBP14.53□□□□□ -0.08
DROSHA-213ENST00000511778 PAK3O75914 559 aaPredicted RBP14.51□□□□□ -0.09
DROSHA-213ENST00000511778 NPM1P06748 294 aaKnown RBP eCLIP14.45□□□□□ -0.1
DROSHA-213ENST00000511778 EHMT2Q96KQ7 1210 aa14.45□□□□□ -0.1
DROSHA-213ENST00000511778 PHF12Q96QT6 1004 aa14.42□□□□□ -0.1
DROSHA-213ENST00000511778 MNX1P50219 401 aaPredicted RBP14.38□□□□□ -0.11
DROSHA-213ENST00000511778 OTUD5Q96G74 571 aa14.34□□□□□ -0.11
DROSHA-213ENST00000511778 POTEB2H3BUK9 544 aa14.32□□□□□ -0.12
DROSHA-213ENST00000511778 PLSCR2Q9NRY7 297 aa14.29□□□□□ -0.12
DROSHA-213ENST00000511778 PELP1Q8IZL8 1130 aaKnown RBP14.27□□□□□ -0.13
DROSHA-213ENST00000511778 MS4A3Q96HJ5 214 aa14.23□□□□□ -0.13
DROSHA-213ENST00000511778 ASTLQ6HA08 431 aaPredicted RBP14.21□□□□□ -0.13
DROSHA-213ENST00000511778 ATMINO43313 823 aaPredicted RBP14.17□□□□□ -0.14
DROSHA-213ENST00000511778 SLC39A7Q92504 469 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms