RNA–Protein interactions for RNA: ENST00000511482.1

PDCD6-208, Transcript of programmed cell death 6, humanhuman

TSL 5

Gene PDCD6, Length 878 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-208ENST00000511482 AEBP2Q6ZN18 517 aaPredicted RBP33.69■■■□□ 2.98
PDCD6-208ENST00000511482 CHIC1Q5VXU3 224 aa32.74■■■□□ 2.83
PDCD6-208ENST00000511482 PHF23Q9BUL5 403 aaPredicted RBP28.81■■■□□ 2.2
PDCD6-208ENST00000511482 SENP3Q9H4L4 574 aaPredicted RBP28.56■■■□□ 2.16
PDCD6-208ENST00000511482 FOXD1Q16676 465 aa26.55■■□□□ 1.84
PDCD6-208ENST00000511482 PLPPR3Q6T4P5 718 aa26.5■■□□□ 1.83
PDCD6-208ENST00000511482 PPP6R1Q9UPN7 881 aa25.47■■□□□ 1.67
PDCD6-208ENST00000511482 ADRA2BP18089 450 aa25.41■■□□□ 1.66
PDCD6-208ENST00000511482 PIAS4Q8N2W9 510 aaPredicted RBP24.97■■□□□ 1.59
PDCD6-208ENST00000511482 MSH5O43196 834 aa24.51■■□□□ 1.51
PDCD6-208ENST00000511482 PPP4R3CPQ6ZMV5 832 aa23.35■■□□□ 1.33
PDCD6-208ENST00000511482 SCAF1Q9H7N4 1312 aaKnown RBP23.2■■□□□ 1.3
PDCD6-208ENST00000511482 MAPK8IP2Q13387 824 aaPredicted RBP23.11■■□□□ 1.29
PDCD6-208ENST00000511482 DMRT2Q9Y5R5 561 aa22.79■■□□□ 1.24
PDCD6-208ENST00000511482 CNKSR2Q8WXI2 1034 aa22.71■■□□□ 1.23
PDCD6-208ENST00000511482 NCBP3Q53F19 620 aaKnown RBP22.66■■□□□ 1.22
PDCD6-208ENST00000511482 KCNA4P22459 653 aa22.65■■□□□ 1.22
PDCD6-208ENST00000511482 POTEDQ86YR6 584 aa22.59■■□□□ 1.21
PDCD6-208ENST00000511482 NPM3O75607 178 aaKnown RBP22.37■■□□□ 1.17
PDCD6-208ENST00000511482 RNF216Q9NWF9 866 aaPredicted RBP22.31■■□□□ 1.16
PDCD6-208ENST00000511482 HOXD11P31277 338 aaPredicted RBP22.28■■□□□ 1.16
PDCD6-208ENST00000511482 NISCHQ9Y2I1 1504 aa21.93■■□□□ 1.1
PDCD6-208ENST00000511482 DNAJC5BQ9UF47 199 aa21.77■■□□□ 1.08
PDCD6-208ENST00000511482 DCAF8L1A6NGE4 600 aa21.76■■□□□ 1.07
PDCD6-208ENST00000511482 SLC4A1APQ9BWU0 796 aaKnown RBP21.52■■□□□ 1.04
PDCD6-208ENST00000511482 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.19■□□□□ 0.983e-6■■□□□ 11.7
PDCD6-208ENST00000511482 SLC4A2P04920 1241 aa21.18■□□□□ 0.98
PDCD6-208ENST00000511482 RNF39Q9H2S5 420 aa21.02■□□□□ 0.96
PDCD6-208ENST00000511482 ZBTB22O15209 634 aa20.87■□□□□ 0.93
PDCD6-208ENST00000511482 FOXD4L1Q9NU39 408 aa20.87■□□□□ 0.93
PDCD6-208ENST00000511482 U3KPZ7 1027 aaPredicted RBP20.86■□□□□ 0.93
PDCD6-208ENST00000511482 C1QBPQ07021 282 aaKnown RBP20.74■□□□□ 0.91
PDCD6-208ENST00000511482 EHMT2Q96KQ7 1210 aa20.74■□□□□ 0.91
PDCD6-208ENST00000511482 MYCNP04198 464 aaPredicted RBP20.65■□□□□ 0.9
PDCD6-208ENST00000511482 CSRNP3Q8WYN3 585 aa20.61■□□□□ 0.89
PDCD6-208ENST00000511482 CACNB1Q02641 598 aaPredicted RBP20.54■□□□□ 0.88
PDCD6-208ENST00000511482 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.51■□□□□ 0.87
PDCD6-208ENST00000511482 HNRNPUL2Q1KMD3 747 aaKnown RBP20.51■□□□□ 0.87
PDCD6-208ENST00000511482 SAMD1Q6SPF0 538 aaPredicted RBP20.44■□□□□ 0.86
PDCD6-208ENST00000511482 SPINK5Q9NQ38 1064 aaPredicted RBP20.33■□□□□ 0.85
PDCD6-208ENST00000511482 APLP2Q06481 763 aa20.31■□□□□ 0.84
PDCD6-208ENST00000511482 CAPN15O75808 1086 aa20.21■□□□□ 0.83
PDCD6-208ENST00000511482 ATXN8OSP0DMR3 200 aa20.16■□□□□ 0.82
PDCD6-208ENST00000511482 ATF5Q9Y2D1 282 aaPredicted RBP20.15■□□□□ 0.82
PDCD6-208ENST00000511482 TRHP20396 242 aaPredicted RBP20.09■□□□□ 0.81
PDCD6-208ENST00000511482 ZNF219Q9P2Y4 722 aaPredicted RBP20.08■□□□□ 0.81
PDCD6-208ENST00000511482 DSG3P32926 999 aa19.95■□□□□ 0.78
PDCD6-208ENST00000511482 ABCB7O75027 752 aa19.84■□□□□ 0.77
PDCD6-208ENST00000511482 POLA2Q14181 598 aa19.75■□□□□ 0.75
PDCD6-208ENST00000511482 CCDC180Q9P1Z9 1646 aa19.56■□□□□ 0.72
PDCD6-208ENST00000511482 ZBTB12Q9Y330 459 aaPredicted RBP19.39■□□□□ 0.69
PDCD6-208ENST00000511482 MKRN4PQ13434 485 aaPredicted RBP19.27■□□□□ 0.68
PDCD6-208ENST00000511482 FBLN2P98095 1184 aa19.25■□□□□ 0.67
PDCD6-208ENST00000511482 ABCC9O60706 1549 aa19.11■□□□□ 0.65
PDCD6-208ENST00000511482 OSCARQ8IYS5 282 aa19.09■□□□□ 0.65
PDCD6-208ENST00000511482 RBM42Q9BTD8 480 aaKnown RBP18.97■□□□□ 0.63
PDCD6-208ENST00000511482 SPDYE2BA6NHP3 402 aa18.87■□□□□ 0.61
PDCD6-208ENST00000511482 SPDYE6P0CI01 402 aa18.87■□□□□ 0.61
PDCD6-208ENST00000511482 SPDYE2Q495Y8 402 aa18.87■□□□□ 0.61
PDCD6-208ENST00000511482 ZNF692Q9BU19 519 aaPredicted RBP18.77■□□□□ 0.6
PDCD6-208ENST00000511482 SSUH2Q9Y2M2 353 aa18.74■□□□□ 0.59
PDCD6-208ENST00000511482 SPDYE4A6NLX3 237 aa18.73■□□□□ 0.59
PDCD6-208ENST00000511482 AKT1S1Q96B36 256 aa18.73■□□□□ 0.59
PDCD6-208ENST00000511482 FKBP8Q14318 412 aa18.61■□□□□ 0.57
PDCD6-208ENST00000511482 REM2Q8IYK8 340 aaPredicted RBP18.56■□□□□ 0.56
PDCD6-208ENST00000511482 PABPN1Q86U42 306 aaKnown RBP eCLIP18.53■□□□□ 0.56
PDCD6-208ENST00000511482 RB1CC1Q8TDY2 1594 aa18.47■□□□□ 0.55
PDCD6-208ENST00000511482 PROM2Q8N271 834 aa18.45■□□□□ 0.54
PDCD6-208ENST00000511482 NACADO15069 1562 aa18.45■□□□□ 0.54
PDCD6-208ENST00000511482 MYO15BQ96JP2 1530 aa18.4■□□□□ 0.54
PDCD6-208ENST00000511482 PITPNM1O00562 1244 aa18.35■□□□□ 0.53
PDCD6-208ENST00000511482 SPDYE1Q8NFV5 336 aaPredicted RBP18.34■□□□□ 0.53
PDCD6-208ENST00000511482 CHRDL2Q6WN34 429 aa18.26■□□□□ 0.51
PDCD6-208ENST00000511482 ZCCHC6Q5VYS8 1495 aaKnown RBP18.26■□□□□ 0.51
PDCD6-208ENST00000511482 CLEC11AQ9Y240 323 aa18.25■□□□□ 0.51
PDCD6-208ENST00000511482 DCAF1Q9Y4B6 1507 aa18.24■□□□□ 0.51
PDCD6-208ENST00000511482 DCAF8L2P0C7V8 631 aa18.23■□□□□ 0.51
PDCD6-208ENST00000511482 STAG3Q9UJ98 1225 aa18.17■□□□□ 0.5
PDCD6-208ENST00000511482 PRR29P0C7W0 189 aa18.07■□□□□ 0.48
PDCD6-208ENST00000511482 FXR2P51116 673 aaKnown RBP eCLIP18.04■□□□□ 0.48
PDCD6-208ENST00000511482 PIP4P2Q8N4L2 257 aa18.02■□□□□ 0.48
PDCD6-208ENST00000511482 UNC13AQ9UPW8 1703 aa18.02■□□□□ 0.48
PDCD6-208ENST00000511482 FBXO3Q9UK99 471 aa17.97■□□□□ 0.47
PDCD6-208ENST00000511482 PRKAR2AP13861 404 aaKnown RBP17.87■□□□□ 0.45
PDCD6-208ENST00000511482 CHADLQ6NUI6 762 aa17.86■□□□□ 0.45
PDCD6-208ENST00000511482 SHROOM4Q9ULL8 1493 aa17.86■□□□□ 0.45
PDCD6-208ENST00000511482 POTEHQ6S545 545 aa17.85■□□□□ 0.45
PDCD6-208ENST00000511482 CREBZFQ9NS37 354 aa17.85■□□□□ 0.45
PDCD6-208ENST00000511482 BICRAQ9NZM4 1560 aa17.83■□□□□ 0.45
PDCD6-208ENST00000511482 VASPP50552 380 aaPredicted RBP17.76■□□□□ 0.43
PDCD6-208ENST00000511482 MIER1Q8N108 512 aa17.76■□□□□ 0.43
PDCD6-208ENST00000511482 PLCD3Q8N3E9 789 aa17.71■□□□□ 0.43
PDCD6-208ENST00000511482 SCRIBQ14160 1630 aa17.71■□□□□ 0.43
PDCD6-208ENST00000511482 MNX1P50219 401 aaPredicted RBP17.67■□□□□ 0.42
PDCD6-208ENST00000511482 FARP1Q9Y4F1 1045 aaPredicted RBP17.67■□□□□ 0.42
PDCD6-208ENST00000511482 PLEKHG5O94827 1062 aa17.64■□□□□ 0.41
PDCD6-208ENST00000511482 IFNLR1Q8IU57 520 aaPredicted RBP17.52■□□□□ 0.4
PDCD6-208ENST00000511482 ZBTB47Q9UFB7 747 aaPredicted RBP17.51■□□□□ 0.39
PDCD6-208ENST00000511482 NPM1P06748 294 aaKnown RBP eCLIP17.5■□□□□ 0.39
PDCD6-208ENST00000511482 KLHL34Q8N239 644 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms