RNA–Protein interactions for RNA: ENST00000511238.5

TBC1D1-217, Transcript of TBC1 domain family member 1, humanhuman

TSL 3

Gene TBC1D1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D1-217ENST00000511238 AEBP2Q6ZN18 517 aaPredicted RBP19.44■□□□□ 0.7
TBC1D1-217ENST00000511238 CHIC1Q5VXU3 224 aa19.26■□□□□ 0.67
TBC1D1-217ENST00000511238 PHF23Q9BUL5 403 aaPredicted RBP16.99■□□□□ 0.31
TBC1D1-217ENST00000511238 SENP3Q9H4L4 574 aaPredicted RBP16.42■□□□□ 0.22
TBC1D1-217ENST00000511238 PLPPR3Q6T4P5 718 aa15.76■□□□□ 0.11
TBC1D1-217ENST00000511238 FOXD1Q16676 465 aa15.22■□□□□ 0.03
TBC1D1-217ENST00000511238 PPP6R1Q9UPN7 881 aa14.89□□□□□ -0.03
TBC1D1-217ENST00000511238 ADRA2BP18089 450 aa14.88□□□□□ -0.03
TBC1D1-217ENST00000511238 PIAS4Q8N2W9 510 aaPredicted RBP14.41□□□□□ -0.1
TBC1D1-217ENST00000511238 KCNA4P22459 653 aa13.95□□□□□ -0.18
TBC1D1-217ENST00000511238 PPP4R3CPQ6ZMV5 832 aa13.93□□□□□ -0.18
TBC1D1-217ENST00000511238 MSH5O43196 834 aa13.9□□□□□ -0.18
TBC1D1-217ENST00000511238 NCBP3Q53F19 620 aaKnown RBP13.63□□□□□ -0.23
TBC1D1-217ENST00000511238 SCAF1Q9H7N4 1312 aaKnown RBP13.59□□□□□ -0.23
TBC1D1-217ENST00000511238 CNKSR2Q8WXI2 1034 aa13.47□□□□□ -0.25
TBC1D1-217ENST00000511238 NPM3O75607 178 aaKnown RBP13.46□□□□□ -0.25
TBC1D1-217ENST00000511238 MAPK8IP2Q13387 824 aaPredicted RBP13.42□□□□□ -0.26
TBC1D1-217ENST00000511238 SLC4A1APQ9BWU0 796 aaKnown RBP13.32□□□□□ -0.28
TBC1D1-217ENST00000511238 EHMT2Q96KQ7 1210 aa13.27□□□□□ -0.29
TBC1D1-217ENST00000511238 DMRT2Q9Y5R5 561 aa13.16□□□□□ -0.3
TBC1D1-217ENST00000511238 RNF216Q9NWF9 866 aaPredicted RBP13.13□□□□□ -0.31
TBC1D1-217ENST00000511238 DNAJC5BQ9UF47 199 aa13.03□□□□□ -0.32
TBC1D1-217ENST00000511238 HOXD11P31277 338 aaPredicted RBP13.02□□□□□ -0.33
TBC1D1-217ENST00000511238 CSRNP3Q8WYN3 585 aa13.02□□□□□ -0.33
TBC1D1-217ENST00000511238 ZBTB22O15209 634 aa12.85□□□□□ -0.35
TBC1D1-217ENST00000511238 FOXD4L1Q9NU39 408 aa12.74□□□□□ -0.37
TBC1D1-217ENST00000511238 SLC4A2P04920 1241 aa12.65□□□□□ -0.38
TBC1D1-217ENST00000511238 DCAF8L1A6NGE4 600 aa12.56□□□□□ -0.4
TBC1D1-217ENST00000511238 MYCNP04198 464 aaPredicted RBP12.41□□□□□ -0.42
TBC1D1-217ENST00000511238 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.38□□□□□ -0.43
TBC1D1-217ENST00000511238 ATXN8OSP0DMR3 200 aa12.27□□□□□ -0.45
TBC1D1-217ENST00000511238 U3KPZ7 1027 aaPredicted RBP12.23□□□□□ -0.45
TBC1D1-217ENST00000511238 POTEDQ86YR6 584 aa12.16□□□□□ -0.46
TBC1D1-217ENST00000511238 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.15□□□□□ -0.46
TBC1D1-217ENST00000511238 HNRNPUL2Q1KMD3 747 aaKnown RBP12.15□□□□□ -0.46
TBC1D1-217ENST00000511238 SAMD1Q6SPF0 538 aaPredicted RBP12.13□□□□□ -0.47
TBC1D1-217ENST00000511238 ATF5Q9Y2D1 282 aaPredicted RBP12.09□□□□□ -0.47
TBC1D1-217ENST00000511238 APLP2Q06481 763 aa11.95□□□□□ -0.5
TBC1D1-217ENST00000511238 RNF39Q9H2S5 420 aa11.95□□□□□ -0.5
TBC1D1-217ENST00000511238 ZNF219Q9P2Y4 722 aaPredicted RBP11.85□□□□□ -0.51
TBC1D1-217ENST00000511238 C1QBPQ07021 282 aaKnown RBP11.82□□□□□ -0.52
TBC1D1-217ENST00000511238 SPINK5Q9NQ38 1064 aaPredicted RBP11.81□□□□□ -0.52
TBC1D1-217ENST00000511238 TRHP20396 242 aaPredicted RBP11.74□□□□□ -0.53
TBC1D1-217ENST00000511238 FKBP8Q14318 412 aa11.73□□□□□ -0.53
TBC1D1-217ENST00000511238 CAPN15O75808 1086 aa11.72□□□□□ -0.53
TBC1D1-217ENST00000511238 POLA2Q14181 598 aa11.63□□□□□ -0.55
TBC1D1-217ENST00000511238 NISCHQ9Y2I1 1504 aa11.58□□□□□ -0.56
TBC1D1-217ENST00000511238 MKRN4PQ13434 485 aaPredicted RBP11.57□□□□□ -0.56
TBC1D1-217ENST00000511238 ABCB7O75027 752 aa11.54□□□□□ -0.56
TBC1D1-217ENST00000511238 FBLN2P98095 1184 aa11.52□□□□□ -0.57
TBC1D1-217ENST00000511238 DSG3P32926 999 aa11.48□□□□□ -0.57
TBC1D1-217ENST00000511238 SPDYE4A6NLX3 237 aa11.44□□□□□ -0.58
TBC1D1-217ENST00000511238 ZBTB12Q9Y330 459 aaPredicted RBP11.43□□□□□ -0.58
TBC1D1-217ENST00000511238 CACNB1Q02641 598 aaPredicted RBP11.41□□□□□ -0.58
TBC1D1-217ENST00000511238 PROM2Q8N271 834 aa11.31□□□□□ -0.6
TBC1D1-217ENST00000511238 OSCARQ8IYS5 282 aa11.22□□□□□ -0.61
TBC1D1-217ENST00000511238 FBXO3Q9UK99 471 aa11.22□□□□□ -0.61
TBC1D1-217ENST00000511238 AMER1Q5JTC6 1135 aaPredicted RBP11.2□□□□□ -0.62
TBC1D1-217ENST00000511238 RTN4Q9NQC3 1192 aaKnown RBP11.2□□□□□ -0.62
TBC1D1-217ENST00000511238 ZNF692Q9BU19 519 aaPredicted RBP11.17□□□□□ -0.62
TBC1D1-217ENST00000511238 SPDYE2BA6NHP3 402 aa11.16□□□□□ -0.62
TBC1D1-217ENST00000511238 SPDYE6P0CI01 402 aa11.16□□□□□ -0.62
TBC1D1-217ENST00000511238 SPDYE2Q495Y8 402 aa11.16□□□□□ -0.62
TBC1D1-217ENST00000511238 SSUH2Q9Y2M2 353 aa11.12□□□□□ -0.63
TBC1D1-217ENST00000511238 VASPP50552 380 aaPredicted RBP11.07□□□□□ -0.64
TBC1D1-217ENST00000511238 PABPN1Q86U42 306 aaKnown RBP eCLIP11.04□□□□□ -0.64
TBC1D1-217ENST00000511238 IFNLR1Q8IU57 520 aaPredicted RBP10.96□□□□□ -0.65
TBC1D1-217ENST00000511238 STAG3Q9UJ98 1225 aa10.95□□□□□ -0.66
TBC1D1-217ENST00000511238 RBM42Q9BTD8 480 aaKnown RBP10.9□□□□□ -0.66
TBC1D1-217ENST00000511238 AKT1S1Q96B36 256 aa10.85□□□□□ -0.67
TBC1D1-217ENST00000511238 PLCD3Q8N3E9 789 aa10.82□□□□□ -0.68
TBC1D1-217ENST00000511238 MIER1Q8N108 512 aa10.81□□□□□ -0.68
TBC1D1-217ENST00000511238 KLHL34Q8N239 644 aa10.8□□□□□ -0.68
TBC1D1-217ENST00000511238 SPDYE1Q8NFV5 336 aaPredicted RBP10.76□□□□□ -0.69
TBC1D1-217ENST00000511238 SPOCK2Q92563 424 aa10.76□□□□□ -0.69
TBC1D1-217ENST00000511238 REM2Q8IYK8 340 aaPredicted RBP10.75□□□□□ -0.69
TBC1D1-217ENST00000511238 PLEKHG5O94827 1062 aa10.71□□□□□ -0.69
TBC1D1-217ENST00000511238 PKD2Q13563 968 aa10.71□□□□□ -0.69
TBC1D1-217ENST00000511238 CLEC11AQ9Y240 323 aa10.7□□□□□ -0.7
TBC1D1-217ENST00000511238 ZBTB47Q9UFB7 747 aaPredicted RBP10.67□□□□□ -0.7
TBC1D1-217ENST00000511238 PRR29P0C7W0 189 aa10.65□□□□□ -0.7
TBC1D1-217ENST00000511238 PITPNM1O00562 1244 aa10.62□□□□□ -0.71
TBC1D1-217ENST00000511238 CREBZFQ9NS37 354 aa10.6□□□□□ -0.71
TBC1D1-217ENST00000511238 SLC24A1O60721 1099 aa10.58□□□□□ -0.72
TBC1D1-217ENST00000511238 ECM2O94769 699 aaPredicted RBP10.56□□□□□ -0.72
TBC1D1-217ENST00000511238 MNX1P50219 401 aaPredicted RBP10.54□□□□□ -0.72
TBC1D1-217ENST00000511238 CIZ1Q9ULV3 898 aaPredicted RBP10.54□□□□□ -0.72
TBC1D1-217ENST00000511238 DCAF8L2P0C7V8 631 aa10.53□□□□□ -0.72
TBC1D1-217ENST00000511238 NUBP1P53384 320 aa10.52□□□□□ -0.73
TBC1D1-217ENST00000511238 RGL2O15211 777 aa10.47□□□□□ -0.73
TBC1D1-217ENST00000511238 GSE1Q14687 1217 aa10.46□□□□□ -0.73
TBC1D1-217ENST00000511238 TRIM41Q8WV44 630 aa10.44□□□□□ -0.74
TBC1D1-217ENST00000511238 DCAF8Q5TAQ9 597 aa10.43□□□□□ -0.74
TBC1D1-217ENST00000511238 CHADLQ6NUI6 762 aa10.42□□□□□ -0.74
TBC1D1-217ENST00000511238 NPM1P06748 294 aaKnown RBP eCLIP10.41□□□□□ -0.74
TBC1D1-217ENST00000511238 RASEFQ8IZ41 740 aa10.4□□□□□ -0.74
TBC1D1-217ENST00000511238 FAM212AQ96EL1 285 aa10.4□□□□□ -0.74
TBC1D1-217ENST00000511238 FXR2P51116 673 aaKnown RBP eCLIP10.38□□□□□ -0.75
TBC1D1-217ENST00000511238 PLCB2Q00722 1185 aa10.37□□□□□ -0.75
TBC1D1-217ENST00000511238 PRKAR2AP13861 404 aaKnown RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 149.4 ms