RNA–Protein interactions for RNA: ENST00000511215.1

AC116353.3-201, humanhuman

BASIC

Gene AC116353.3, Length 249 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC116353.3-201ENST00000511215 AEBP2Q6ZN18 517 aaPredicted RBP27.83■■■□□ 2.05
AC116353.3-201ENST00000511215 CHIC1Q5VXU3 224 aa26.5■■□□□ 1.83
AC116353.3-201ENST00000511215 SENP3Q9H4L4 574 aaPredicted RBP23.59■■□□□ 1.37
AC116353.3-201ENST00000511215 PHF23Q9BUL5 403 aaPredicted RBP23.34■■□□□ 1.33
AC116353.3-201ENST00000511215 FOXD1Q16676 465 aa22.06■■□□□ 1.12
AC116353.3-201ENST00000511215 PLPPR3Q6T4P5 718 aa21.19■□□□□ 0.98
AC116353.3-201ENST00000511215 PPP6R1Q9UPN7 881 aa20.77■□□□□ 0.92
AC116353.3-201ENST00000511215 ADRA2BP18089 450 aa20.7■□□□□ 0.9
AC116353.3-201ENST00000511215 PIAS4Q8N2W9 510 aaPredicted RBP20.62■□□□□ 0.89
AC116353.3-201ENST00000511215 MSH5O43196 834 aa20.47■□□□□ 0.87
AC116353.3-201ENST00000511215 POTEDQ86YR6 584 aa19.82■□□□□ 0.76
AC116353.3-201ENST00000511215 MAPK8IP2Q13387 824 aaPredicted RBP18.97■□□□□ 0.63
AC116353.3-201ENST00000511215 DMRT2Q9Y5R5 561 aa18.77■□□□□ 0.6
AC116353.3-201ENST00000511215 SCAF1Q9H7N4 1312 aaKnown RBP18.76■□□□□ 0.59
AC116353.3-201ENST00000511215 PPP4R3CPQ6ZMV5 832 aa18.64■□□□□ 0.57
AC116353.3-201ENST00000511215 CNKSR2Q8WXI2 1034 aa18.21■□□□□ 0.51
AC116353.3-201ENST00000511215 HOXD11P31277 338 aaPredicted RBP18.13■□□□□ 0.49
AC116353.3-201ENST00000511215 RNF216Q9NWF9 866 aaPredicted RBP18.01■□□□□ 0.47
AC116353.3-201ENST00000511215 DCAF8L1A6NGE4 600 aa17.97■□□□□ 0.47
AC116353.3-201ENST00000511215 NCBP3Q53F19 620 aaKnown RBP17.86■□□□□ 0.45
AC116353.3-201ENST00000511215 NPM3O75607 178 aaKnown RBP17.74■□□□□ 0.43
AC116353.3-201ENST00000511215 KCNA4P22459 653 aa17.57■□□□□ 0.4
AC116353.3-201ENST00000511215 RNF39Q9H2S5 420 aa17.55■□□□□ 0.4
AC116353.3-201ENST00000511215 CACNB1Q02641 598 aaPredicted RBP17.49■□□□□ 0.39
AC116353.3-201ENST00000511215 DNAJC5BQ9UF47 199 aa17.39■□□□□ 0.37
AC116353.3-201ENST00000511215 C1QBPQ07021 282 aaKnown RBP17.24■□□□□ 0.35
AC116353.3-201ENST00000511215 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.23■□□□□ 0.35
AC116353.3-201ENST00000511215 U3KPZ7 1027 aaPredicted RBP16.99■□□□□ 0.31
AC116353.3-201ENST00000511215 SLC4A2P04920 1241 aa16.94■□□□□ 0.3
AC116353.3-201ENST00000511215 SPINK5Q9NQ38 1064 aaPredicted RBP16.71■□□□□ 0.27
AC116353.3-201ENST00000511215 CAPN15O75808 1086 aa16.59■□□□□ 0.25
AC116353.3-201ENST00000511215 SLC4A1APQ9BWU0 796 aaKnown RBP16.55■□□□□ 0.24
AC116353.3-201ENST00000511215 DSG3P32926 999 aa16.49■□□□□ 0.23
AC116353.3-201ENST00000511215 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.39■□□□□ 0.21
AC116353.3-201ENST00000511215 HNRNPUL2Q1KMD3 747 aaKnown RBP16.39■□□□□ 0.21
AC116353.3-201ENST00000511215 TRHP20396 242 aaPredicted RBP16.37■□□□□ 0.21
AC116353.3-201ENST00000511215 MYCNP04198 464 aaPredicted RBP16.35■□□□□ 0.21
AC116353.3-201ENST00000511215 SAMD1Q6SPF0 538 aaPredicted RBP16.35■□□□□ 0.21
AC116353.3-201ENST00000511215 APLP2Q06481 763 aa16.34■□□□□ 0.21
AC116353.3-201ENST00000511215 ZNF219Q9P2Y4 722 aaPredicted RBP16.3■□□□□ 0.2
AC116353.3-201ENST00000511215 ABCB7O75027 752 aa16.29■□□□□ 0.2
AC116353.3-201ENST00000511215 FOXD4L1Q9NU39 408 aa16.28■□□□□ 0.2
AC116353.3-201ENST00000511215 ZBTB22O15209 634 aa16.22■□□□□ 0.19
AC116353.3-201ENST00000511215 ATF5Q9Y2D1 282 aaPredicted RBP16.07■□□□□ 0.16
AC116353.3-201ENST00000511215 POLA2Q14181 598 aa15.97■□□□□ 0.15
AC116353.3-201ENST00000511215 ATXN8OSP0DMR3 200 aa15.7■□□□□ 0.1
AC116353.3-201ENST00000511215 RBM42Q9BTD8 480 aaKnown RBP15.64■□□□□ 0.09
AC116353.3-201ENST00000511215 ZBTB12Q9Y330 459 aaPredicted RBP15.57■□□□□ 0.08
AC116353.3-201ENST00000511215 CSRNP3Q8WYN3 585 aa15.54■□□□□ 0.08
AC116353.3-201ENST00000511215 POTEHQ6S545 545 aa15.52■□□□□ 0.08
AC116353.3-201ENST00000511215 OSCARQ8IYS5 282 aa15.51■□□□□ 0.07
AC116353.3-201ENST00000511215 EHMT2Q96KQ7 1210 aa15.43■□□□□ 0.06
AC116353.3-201ENST00000511215 MKRN4PQ13434 485 aaPredicted RBP15.34■□□□□ 0.05
AC116353.3-201ENST00000511215 AKT1S1Q96B36 256 aa15.33■□□□□ 0.04
AC116353.3-201ENST00000511215 CHRDL2Q6WN34 429 aa15.31■□□□□ 0.04
AC116353.3-201ENST00000511215 FBLN2P98095 1184 aa15.28■□□□□ 0.04
AC116353.3-201ENST00000511215 REM2Q8IYK8 340 aaPredicted RBP15.24■□□□□ 0.03
AC116353.3-201ENST00000511215 SPDYE2BA6NHP3 402 aa15.15■□□□□ 0.02
AC116353.3-201ENST00000511215 SPDYE6P0CI01 402 aa15.15■□□□□ 0.02
AC116353.3-201ENST00000511215 SPDYE2Q495Y8 402 aa15.15■□□□□ 0.02
AC116353.3-201ENST00000511215 PITPNM1O00562 1244 aa15.12■□□□□ 0.01
AC116353.3-201ENST00000511215 SSUH2Q9Y2M2 353 aa15.03■□□□□ -0
AC116353.3-201ENST00000511215 PIP4P2Q8N4L2 257 aa15□□□□□ -0.01
AC116353.3-201ENST00000511215 ZNF692Q9BU19 519 aaPredicted RBP14.99□□□□□ -0.01
AC116353.3-201ENST00000511215 FXR2P51116 673 aaKnown RBP eCLIP14.91□□□□□ -0.02
AC116353.3-201ENST00000511215 SPDYE1Q8NFV5 336 aaPredicted RBP14.84□□□□□ -0.03
AC116353.3-201ENST00000511215 CLEC11AQ9Y240 323 aa14.83□□□□□ -0.04
AC116353.3-201ENST00000511215 PABPN1Q86U42 306 aaKnown RBP eCLIP14.82□□□□□ -0.04
AC116353.3-201ENST00000511215 PRKAR2AP13861 404 aaKnown RBP14.69□□□□□ -0.06
AC116353.3-201ENST00000511215 HAX1O00165 279 aa14.63□□□□□ -0.07
AC116353.3-201ENST00000511215 SP7Q8TDD2 431 aaPredicted RBP14.62□□□□□ -0.07
AC116353.3-201ENST00000511215 SPDYE4A6NLX3 237 aa14.6□□□□□ -0.07
AC116353.3-201ENST00000511215 CHADLQ6NUI6 762 aa14.6□□□□□ -0.07
AC116353.3-201ENST00000511215 PRR29P0C7W0 189 aa14.58□□□□□ -0.08
AC116353.3-201ENST00000511215 EVX2Q03828 476 aa14.58□□□□□ -0.08
AC116353.3-201ENST00000511215 C19orf67A6NJJ6 358 aa14.43□□□□□ -0.1
AC116353.3-201ENST00000511215 FARP1Q9Y4F1 1045 aaPredicted RBP14.35□□□□□ -0.11
AC116353.3-201ENST00000511215 STAG3Q9UJ98 1225 aa14.34□□□□□ -0.11
AC116353.3-201ENST00000511215 CREBZFQ9NS37 354 aa14.33□□□□□ -0.12
AC116353.3-201ENST00000511215 PROM2Q8N271 834 aa14.32□□□□□ -0.12
AC116353.3-201ENST00000511215 CD44P16070 742 aaKnown RBP14.23□□□□□ -0.13
AC116353.3-201ENST00000511215 GABBR2O75899 941 aa14.17□□□□□ -0.14
AC116353.3-201ENST00000511215 MNX1P50219 401 aaPredicted RBP14.14□□□□□ -0.15
AC116353.3-201ENST00000511215 FKBP8Q14318 412 aa14.06□□□□□ -0.16
AC116353.3-201ENST00000511215 ZRANB1Q9UGI0 708 aa14.04□□□□□ -0.16
AC116353.3-201ENST00000511215 ZNF579Q8NAF0 562 aaKnown RBP14.03□□□□□ -0.16
AC116353.3-201ENST00000511215 NPM1P06748 294 aaKnown RBP eCLIP13.95□□□□□ -0.18
AC116353.3-201ENST00000511215 POTEIP0CG38 1075 aa13.95□□□□□ -0.18
AC116353.3-201ENST00000511215 PHF12Q96QT6 1004 aa13.93□□□□□ -0.18
AC116353.3-201ENST00000511215 GALR2O43603 387 aaPredicted RBP13.88□□□□□ -0.19
AC116353.3-201ENST00000511215 PAK3O75914 559 aaPredicted RBP13.88□□□□□ -0.19
AC116353.3-201ENST00000511215 MIER1Q8N108 512 aa13.87□□□□□ -0.19
AC116353.3-201ENST00000511215 CLCN6P51797 869 aa13.85□□□□□ -0.19
AC116353.3-201ENST00000511215 TSPYL2Q9H2G4 693 aaPredicted RBP13.8□□□□□ -0.2
AC116353.3-201ENST00000511215 PLCD3Q8N3E9 789 aa13.79□□□□□ -0.2
AC116353.3-201ENST00000511215 RASEFQ8IZ41 740 aa13.77□□□□□ -0.21
AC116353.3-201ENST00000511215 DCBLD2Q96PD2 775 aa13.77□□□□□ -0.21
AC116353.3-201ENST00000511215 PLEKHG5O94827 1062 aa13.76□□□□□ -0.21
AC116353.3-201ENST00000511215 CCDC61Q9Y6R9 512 aa13.76□□□□□ -0.21
AC116353.3-201ENST00000511215 MS4A3Q96HJ5 214 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms