RNA–Protein interactions for RNA: ENST00000510946.5

AC016550.2-201, humanhuman

TSL 3

Gene AC016550.2, Length 557 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC016550.2-201ENST00000510946 AEBP2Q6ZN18 517 aaPredicted RBP26.49■■□□□ 1.83
AC016550.2-201ENST00000510946 CHIC1Q5VXU3 224 aa25.65■■□□□ 1.7
AC016550.2-201ENST00000510946 PHF23Q9BUL5 403 aaPredicted RBP22.55■■□□□ 1.2
AC016550.2-201ENST00000510946 SENP3Q9H4L4 574 aaPredicted RBP22.51■■□□□ 1.19
AC016550.2-201ENST00000510946 FOXD1Q16676 465 aa20.92■□□□□ 0.94
AC016550.2-201ENST00000510946 PLPPR3Q6T4P5 718 aa20.77■□□□□ 0.92
AC016550.2-201ENST00000510946 ADRA2BP18089 450 aa19.99■□□□□ 0.79
AC016550.2-201ENST00000510946 PPP6R1Q9UPN7 881 aa19.97■□□□□ 0.79
AC016550.2-201ENST00000510946 PIAS4Q8N2W9 510 aaPredicted RBP19.74■□□□□ 0.75
AC016550.2-201ENST00000510946 MSH5O43196 834 aa19.36■□□□□ 0.69
AC016550.2-201ENST00000510946 PPP4R3CPQ6ZMV5 832 aa18.29■□□□□ 0.52
AC016550.2-201ENST00000510946 SCAF1Q9H7N4 1312 aaKnown RBP18.24■□□□□ 0.51
AC016550.2-201ENST00000510946 MAPK8IP2Q13387 824 aaPredicted RBP18.19■□□□□ 0.5
AC016550.2-201ENST00000510946 POTEDQ86YR6 584 aa18■□□□□ 0.47
AC016550.2-201ENST00000510946 DMRT2Q9Y5R5 561 aa17.92■□□□□ 0.46
AC016550.2-201ENST00000510946 CNKSR2Q8WXI2 1034 aa17.8■□□□□ 0.44
AC016550.2-201ENST00000510946 NCBP3Q53F19 620 aaKnown RBP17.75■□□□□ 0.43
AC016550.2-201ENST00000510946 KCNA4P22459 653 aa17.66■□□□□ 0.42
AC016550.2-201ENST00000510946 NPM3O75607 178 aaKnown RBP17.5■□□□□ 0.39
AC016550.2-201ENST00000510946 RNF216Q9NWF9 866 aaPredicted RBP17.48■□□□□ 0.39
AC016550.2-201ENST00000510946 HOXD11P31277 338 aaPredicted RBP17.44■□□□□ 0.38
AC016550.2-201ENST00000510946 DCAF8L1A6NGE4 600 aa17.31■□□□□ 0.36
AC016550.2-201ENST00000510946 DNAJC5BQ9UF47 199 aa16.84■□□□□ 0.29
AC016550.2-201ENST00000510946 SLC4A1APQ9BWU0 796 aaKnown RBP16.8■□□□□ 0.28
AC016550.2-201ENST00000510946 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.73■□□□□ 0.27
AC016550.2-201ENST00000510946 RNF39Q9H2S5 420 aa16.56■□□□□ 0.24
AC016550.2-201ENST00000510946 SLC4A2P04920 1241 aa16.54■□□□□ 0.24
AC016550.2-201ENST00000510946 U3KPZ7 1027 aaPredicted RBP16.4■□□□□ 0.22
AC016550.2-201ENST00000510946 CACNB1Q02641 598 aaPredicted RBP16.34■□□□□ 0.21
AC016550.2-201ENST00000510946 C1QBPQ07021 282 aaKnown RBP16.34■□□□□ 0.21
AC016550.2-201ENST00000510946 FOXD4L1Q9NU39 408 aa16.3■□□□□ 0.2
AC016550.2-201ENST00000510946 ZBTB22O15209 634 aa16.23■□□□□ 0.19
AC016550.2-201ENST00000510946 EHMT2Q96KQ7 1210 aa16.18■□□□□ 0.18
AC016550.2-201ENST00000510946 MYCNP04198 464 aaPredicted RBP16.17■□□□□ 0.18
AC016550.2-201ENST00000510946 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.1■□□□□ 0.17
AC016550.2-201ENST00000510946 HNRNPUL2Q1KMD3 747 aaKnown RBP16.1■□□□□ 0.17
AC016550.2-201ENST00000510946 SAMD1Q6SPF0 538 aaPredicted RBP16.04■□□□□ 0.16
AC016550.2-201ENST00000510946 SPINK5Q9NQ38 1064 aaPredicted RBP16.03■□□□□ 0.16
AC016550.2-201ENST00000510946 CAPN15O75808 1086 aa16.01■□□□□ 0.15
AC016550.2-201ENST00000510946 APLP2Q06481 763 aa15.99■□□□□ 0.15
AC016550.2-201ENST00000510946 CSRNP3Q8WYN3 585 aa15.97■□□□□ 0.15
AC016550.2-201ENST00000510946 TRHP20396 242 aaPredicted RBP15.89■□□□□ 0.13
AC016550.2-201ENST00000510946 ZNF219Q9P2Y4 722 aaPredicted RBP15.81■□□□□ 0.12
AC016550.2-201ENST00000510946 ATF5Q9Y2D1 282 aaPredicted RBP15.77■□□□□ 0.12
AC016550.2-201ENST00000510946 ABCB7O75027 752 aa15.71■□□□□ 0.11
AC016550.2-201ENST00000510946 DSG3P32926 999 aa15.71■□□□□ 0.11
AC016550.2-201ENST00000510946 ATXN8OSP0DMR3 200 aa15.68■□□□□ 0.1
AC016550.2-201ENST00000510946 POLA2Q14181 598 aa15.54■□□□□ 0.08
AC016550.2-201ENST00000510946 ZBTB12Q9Y330 459 aaPredicted RBP15.23■□□□□ 0.03
AC016550.2-201ENST00000510946 FBLN2P98095 1184 aa15.14■□□□□ 0.01
AC016550.2-201ENST00000510946 OSCARQ8IYS5 282 aa15.06■□□□□ 0
AC016550.2-201ENST00000510946 MKRN4PQ13434 485 aaPredicted RBP15.05■□□□□ -0
AC016550.2-201ENST00000510946 RBM42Q9BTD8 480 aaKnown RBP14.98□□□□□ -0.01
AC016550.2-201ENST00000510946 SPDYE2BA6NHP3 402 aa14.8□□□□□ -0.04
AC016550.2-201ENST00000510946 SPDYE6P0CI01 402 aa14.8□□□□□ -0.04
AC016550.2-201ENST00000510946 SPDYE2Q495Y8 402 aa14.8□□□□□ -0.04
AC016550.2-201ENST00000510946 ZNF692Q9BU19 519 aaPredicted RBP14.76□□□□□ -0.05
AC016550.2-201ENST00000510946 AKT1S1Q96B36 256 aa14.73□□□□□ -0.05
AC016550.2-201ENST00000510946 SPDYE4A6NLX3 237 aa14.65□□□□□ -0.06
AC016550.2-201ENST00000510946 SSUH2Q9Y2M2 353 aa14.64□□□□□ -0.07
AC016550.2-201ENST00000510946 REM2Q8IYK8 340 aaPredicted RBP14.62□□□□□ -0.07
AC016550.2-201ENST00000510946 PABPN1Q86U42 306 aaKnown RBP eCLIP14.57□□□□□ -0.08
AC016550.2-201ENST00000510946 FKBP8Q14318 412 aa14.52□□□□□ -0.09
AC016550.2-201ENST00000510946 PITPNM1O00562 1244 aa14.48□□□□□ -0.09
AC016550.2-201ENST00000510946 CLEC11AQ9Y240 323 aa14.47□□□□□ -0.09
AC016550.2-201ENST00000510946 CHRDL2Q6WN34 429 aa14.45□□□□□ -0.1
AC016550.2-201ENST00000510946 SPDYE1Q8NFV5 336 aaPredicted RBP14.44□□□□□ -0.1
AC016550.2-201ENST00000510946 PROM2Q8N271 834 aa14.27□□□□□ -0.13
AC016550.2-201ENST00000510946 PRR29P0C7W0 189 aa14.25□□□□□ -0.13
AC016550.2-201ENST00000510946 POTEHQ6S545 545 aa14.23□□□□□ -0.13
AC016550.2-201ENST00000510946 PIP4P2Q8N4L2 257 aa14.23□□□□□ -0.13
AC016550.2-201ENST00000510946 STAG3Q9UJ98 1225 aa14.23□□□□□ -0.13
AC016550.2-201ENST00000510946 FXR2P51116 673 aaKnown RBP eCLIP14.19□□□□□ -0.14
AC016550.2-201ENST00000510946 PRKAR2AP13861 404 aaKnown RBP14.13□□□□□ -0.15
AC016550.2-201ENST00000510946 CHADLQ6NUI6 762 aa14.11□□□□□ -0.15
AC016550.2-201ENST00000510946 CREBZFQ9NS37 354 aa13.99□□□□□ -0.17
AC016550.2-201ENST00000510946 FBXO3Q9UK99 471 aa13.99□□□□□ -0.17
AC016550.2-201ENST00000510946 MIER1Q8N108 512 aa13.94□□□□□ -0.18
AC016550.2-201ENST00000510946 PLCD3Q8N3E9 789 aa13.92□□□□□ -0.18
AC016550.2-201ENST00000510946 FARP1Q9Y4F1 1045 aaPredicted RBP13.9□□□□□ -0.18
AC016550.2-201ENST00000510946 PLEKHG5O94827 1062 aa13.89□□□□□ -0.19
AC016550.2-201ENST00000510946 HAX1O00165 279 aa13.86□□□□□ -0.19
AC016550.2-201ENST00000510946 VASPP50552 380 aaPredicted RBP13.83□□□□□ -0.2
AC016550.2-201ENST00000510946 MNX1P50219 401 aaPredicted RBP13.78□□□□□ -0.2
AC016550.2-201ENST00000510946 NPM1P06748 294 aaKnown RBP eCLIP13.77□□□□□ -0.21
AC016550.2-201ENST00000510946 C19orf67A6NJJ6 358 aa13.72□□□□□ -0.21
AC016550.2-201ENST00000510946 CD44P16070 742 aaKnown RBP13.71□□□□□ -0.21
AC016550.2-201ENST00000510946 ZBTB47Q9UFB7 747 aaPredicted RBP13.71□□□□□ -0.21
AC016550.2-201ENST00000510946 KLHL34Q8N239 644 aa13.7□□□□□ -0.22
AC016550.2-201ENST00000510946 EVX2Q03828 476 aa13.69□□□□□ -0.22
AC016550.2-201ENST00000510946 PAK3O75914 559 aaPredicted RBP13.63□□□□□ -0.23
AC016550.2-201ENST00000510946 ZRANB1Q9UGI0 708 aa13.62□□□□□ -0.23
AC016550.2-201ENST00000510946 IFNLR1Q8IU57 520 aaPredicted RBP13.61□□□□□ -0.23
AC016550.2-201ENST00000510946 TSPYL2Q9H2G4 693 aaPredicted RBP13.6□□□□□ -0.23
AC016550.2-201ENST00000510946 SP7Q8TDD2 431 aaPredicted RBP13.58□□□□□ -0.24
AC016550.2-201ENST00000510946 RASEFQ8IZ41 740 aa13.57□□□□□ -0.24
AC016550.2-201ENST00000510946 NUBP1P53384 320 aa13.54□□□□□ -0.24
AC016550.2-201ENST00000510946 SPOCK2Q92563 424 aa13.5□□□□□ -0.25
AC016550.2-201ENST00000510946 FAM212AQ96EL1 285 aa13.49□□□□□ -0.25
AC016550.2-201ENST00000510946 PHF12Q96QT6 1004 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms