RNA–Protein interactions for RNA: ENST00000510877.5

LIN54-210, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 4,507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-210ENST00000510877 POLA1P09884 1462 aaPredicted RBP18.57■□□□□ 0.56
LIN54-210ENST00000510877 FHAD1B1AJZ9 1412 aa18.56■□□□□ 0.56
LIN54-210ENST00000510877 MTUS2Q5JR59 1369 aa18.54■□□□□ 0.56
LIN54-210ENST00000510877 PRG4Q92954 1404 aaPredicted RBP18.53■□□□□ 0.56
LIN54-210ENST00000510877 CHGAP10645 457 aaKnown RBP18.52■□□□□ 0.56
LIN54-210ENST00000510877 PEG3Q9GZU2 1588 aa18.52■□□□□ 0.56
LIN54-210ENST00000510877 URB2Q14146 1524 aaKnown RBP18.52■□□□□ 0.55
LIN54-210ENST00000510877 EEA1Q15075 1411 aa18.51■□□□□ 0.55
LIN54-210ENST00000510877 DNMBPQ6XZF7 1577 aa18.51■□□□□ 0.55
LIN54-210ENST00000510877 TRIM52Q96A61 297 aa18.51■□□□□ 0.55
LIN54-210ENST00000510877 ZNF608Q9ULD9 1512 aaPredicted RBP18.5■□□□□ 0.55
LIN54-210ENST00000510877 CFDP1Q9UEE9 299 aaPredicted RBP18.48■□□□□ 0.55
LIN54-210ENST00000510877 EFCAB2Q5VUJ9 269 aa18.48■□□□□ 0.55
LIN54-210ENST00000510877 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.47■□□□□ 0.55
LIN54-210ENST00000510877 SCAF1Q9H7N4 1312 aaKnown RBP18.47■□□□□ 0.55
LIN54-210ENST00000510877 SYNJ2O15056 1496 aa18.41■□□□□ 0.54
LIN54-210ENST00000510877 TNIKQ9UKE5 1360 aa18.4■□□□□ 0.54
LIN54-210ENST00000510877 RAPGEF2Q9Y4G8 1499 aa18.4■□□□□ 0.54
LIN54-210ENST00000510877 MAGI1Q96QZ7 1491 aaPredicted RBP18.4■□□□□ 0.54
LIN54-210ENST00000510877 GOLGA3Q08378 1498 aa18.39■□□□□ 0.53
LIN54-210ENST00000510877 C14orf37Q86TY3 774 aa18.38■□□□□ 0.53
LIN54-210ENST00000510877 SYNJ1O43426 1573 aa18.37■□□□□ 0.53
LIN54-210ENST00000510877 IGF1RP08069 1367 aa18.36■□□□□ 0.53
LIN54-210ENST00000510877 PPP1R15AO75807 674 aaPredicted RBP18.35■□□□□ 0.53
LIN54-210ENST00000510877 CLIP1P30622 1438 aa18.35■□□□□ 0.53
LIN54-210ENST00000510877 GGT6Q6P531 493 aa18.33■□□□□ 0.53
LIN54-210ENST00000510877 WDR62O43379 1518 aa18.31■□□□□ 0.52
LIN54-210ENST00000510877 KIF21AQ7Z4S6 1674 aa18.28■□□□□ 0.52
LIN54-210ENST00000510877 CHIC2Q9UKJ5 165 aa18.28■□□□□ 0.52
LIN54-210ENST00000510877 SENP3Q9H4L4 574 aaPredicted RBP18.27■□□□□ 0.51
LIN54-210ENST00000510877 CUX1P39880 1505 aa18.25■□□□□ 0.51
LIN54-210ENST00000510877 CCNB3Q8WWL7 1395 aa18.24■□□□□ 0.51
LIN54-210ENST00000510877 SLC4A1APQ9BWU0 796 aaKnown RBP18.22■□□□□ 0.51
LIN54-210ENST00000510877 GRIN2AQ12879 1464 aa18.21■□□□□ 0.51
LIN54-210ENST00000510877 ABCA10Q8WWZ4 1543 aa18.2■□□□□ 0.5
LIN54-210ENST00000510877 FMN1Q68DA7 1419 aa18.16■□□□□ 0.5
LIN54-210ENST00000510877 ZNF326Q5BKZ1 582 aaKnown RBP18.15■□□□□ 0.5
LIN54-210ENST00000510877 SPAG9O60271 1321 aaKnown RBP18.14■□□□□ 0.49
LIN54-210ENST00000510877 KIAA0586Q9BVV6 1533 aa18.13■□□□□ 0.49
LIN54-210ENST00000510877 PCGF6Q9BYE7 350 aa18.11■□□□□ 0.49
LIN54-210ENST00000510877 HDGFP51858 240 aaKnown RBP18.11■□□□□ 0.49
LIN54-210ENST00000510877 FHOD3Q2V2M9 1422 aa18.11■□□□□ 0.49
LIN54-210ENST00000510877 UACAQ9BZF9 1416 aa18.09■□□□□ 0.49
LIN54-210ENST00000510877 KIF3BO15066 747 aa18.06■□□□□ 0.48
LIN54-210ENST00000510877 RAPGEF3O95398 923 aa18.04■□□□□ 0.48
LIN54-210ENST00000510877 POGZQ7Z3K3 1410 aa18.03■□□□□ 0.48
LIN54-210ENST00000510877 HAP1P54257 671 aaPredicted RBP18.03■□□□□ 0.48
LIN54-210ENST00000510877 KANK1Q14678 1352 aa18.02■□□□□ 0.48
LIN54-210ENST00000510877 WASHC2CQ9Y4E1 1318 aa18.02■□□□□ 0.48
LIN54-210ENST00000510877 HNRNPMP52272 730 aaKnown RBP eCLIP18.02■□□□□ 0.48
LIN54-210ENST00000510877 ARHGEF11O15085 1522 aa18.01■□□□□ 0.47
LIN54-210ENST00000510877 EIF4G3O43432 1585 aaKnown RBP18.01■□□□□ 0.47
LIN54-210ENST00000510877 CD109Q6YHK3 1445 aa18.01■□□□□ 0.47
LIN54-210ENST00000510877 EID1Q9Y6B2 187 aa18.01■□□□□ 0.47
LIN54-210ENST00000510877 POLR3GLQ9BT43 218 aa18.01■□□□□ 0.47
LIN54-210ENST00000510877 THOC2Q8NI27 1593 aaKnown RBP18■□□□□ 0.47
LIN54-210ENST00000510877 CENPBP07199 599 aaPredicted RBP17.99■□□□□ 0.47
LIN54-210ENST00000510877 ERICH3Q5RHP9 1530 aa17.98■□□□□ 0.47
LIN54-210ENST00000510877 TOP2BQ02880 1626 aa17.98■□□□□ 0.47
LIN54-210ENST00000510877 PLB1Q6P1J6 1458 aa17.97■□□□□ 0.47
LIN54-210ENST00000510877 RRP7BPQ9NSQ0 103 aa17.97■□□□□ 0.47
LIN54-210ENST00000510877 RSPH4AQ5TD94 716 aa17.96■□□□□ 0.47
LIN54-210ENST00000510877 PLEKHG5O94827 1062 aa17.94■□□□□ 0.46
LIN54-210ENST00000510877 RUSC2Q8N2Y8 1516 aa17.93■□□□□ 0.46
LIN54-210ENST00000510877 CCER1Q8TC90 406 aaPredicted RBP17.91■□□□□ 0.46
LIN54-210ENST00000510877 CCDC18Q5T9S5 1454 aa17.9■□□□□ 0.46
LIN54-210ENST00000510877 TEX14Q8IWB6 1497 aa17.89■□□□□ 0.46
LIN54-210ENST00000510877 AFAP1Q8N556 730 aa17.89■□□□□ 0.45
LIN54-210ENST00000510877 DMRT2Q9Y5R5 561 aa17.88■□□□□ 0.45
LIN54-210ENST00000510877 CEP162Q5TB80 1403 aa17.88■□□□□ 0.45
LIN54-210ENST00000510877 PRDM2Q13029 1718 aa17.87■□□□□ 0.45
LIN54-210ENST00000510877 PHF23Q9BUL5 403 aaPredicted RBP17.84■□□□□ 0.45
LIN54-210ENST00000510877 ASXL2Q76L83 1435 aa17.84■□□□□ 0.45
LIN54-210ENST00000510877 LMOD2Q6P5Q4 547 aa17.83■□□□□ 0.44
LIN54-210ENST00000510877 A0A0G2JS52 829 aa17.82■□□□□ 0.44
LIN54-210ENST00000510877 IQGAP2Q13576 1575 aa17.82■□□□□ 0.44
LIN54-210ENST00000510877 ZEB1P37275 1124 aaPredicted RBP17.81■□□□□ 0.44
LIN54-210ENST00000510877 NEUROD1Q13562 356 aa17.79■□□□□ 0.44
LIN54-210ENST00000510877 SCAPERQ9BY12 1400 aa17.77■□□□□ 0.44
LIN54-210ENST00000510877 NUP160Q12769 1436 aa17.76■□□□□ 0.43
LIN54-210ENST00000510877 RGL3Q3MIN7 710 aa17.75■□□□□ 0.43
LIN54-210ENST00000510877 ARAP1Q96P48 1450 aa17.72■□□□□ 0.43
LIN54-210ENST00000510877 CUL7Q14999 1698 aa17.72■□□□□ 0.43
LIN54-210ENST00000510877 THEMISQ8N1K5 641 aaPredicted RBP17.71■□□□□ 0.43
LIN54-210ENST00000510877 ARHGAP5Q13017 1502 aa17.71■□□□□ 0.43
LIN54-210ENST00000510877 PIP4K2BP78356 416 aa17.7■□□□□ 0.42
LIN54-210ENST00000510877 AKNAQ7Z591 1439 aa17.7■□□□□ 0.42
LIN54-210ENST00000510877 KDM2AQ9Y2K7 1162 aa17.7■□□□□ 0.42
LIN54-210ENST00000510877 ERICH6Q7L0X2 663 aa17.69■□□□□ 0.42
LIN54-210ENST00000510877 MEX3CQ5U5Q3 659 aaKnown RBP17.68■□□□□ 0.42
LIN54-210ENST00000510877 ZBTB7CA1YPR0 619 aa17.68■□□□□ 0.42
LIN54-210ENST00000510877 ANKRD30AQ9BXX3 1397 aa17.68■□□□□ 0.42
LIN54-210ENST00000510877 DENND4BO75064 1496 aaPredicted RBP17.68■□□□□ 0.42
LIN54-210ENST00000510877 PHLDB1Q86UU1 1377 aa17.68■□□□□ 0.42
LIN54-210ENST00000510877 CEBPAP49715 358 aaPredicted RBP17.67■□□□□ 0.42
LIN54-210ENST00000510877 ADAMTS12P58397 1594 aa17.67■□□□□ 0.42
LIN54-210ENST00000510877 CEP170Q5SW79 1584 aa17.67■□□□□ 0.42
LIN54-210ENST00000510877 ANKLE2Q86XL3 938 aa17.67■□□□□ 0.42
LIN54-210ENST00000510877 POGKQ9P215 609 aa17.67■□□□□ 0.42
LIN54-210ENST00000510877 WDR97A6NE52 1622 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms