RNA–Protein interactions for RNA: ENST00000510004.2

AC016556.1-201, humanhuman

TSL 2 BASIC

Gene AC016556.1, Length 935 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC016556.1-201ENST00000510004 AEBP2Q6ZN18 517 aaPredicted RBP23.41■■□□□ 1.34
AC016556.1-201ENST00000510004 CHIC1Q5VXU3 224 aa22.1■■□□□ 1.13
AC016556.1-201ENST00000510004 SENP3Q9H4L4 574 aaPredicted RBP20.22■□□□□ 0.83
AC016556.1-201ENST00000510004 PHF23Q9BUL5 403 aaPredicted RBP19.82■□□□□ 0.76
AC016556.1-201ENST00000510004 FOXD1Q16676 465 aa18.74■□□□□ 0.59
AC016556.1-201ENST00000510004 POTEDQ86YR6 584 aa17.95■□□□□ 0.46
AC016556.1-201ENST00000510004 MSH5O43196 834 aa17.82■□□□□ 0.44
AC016556.1-201ENST00000510004 PLPPR3Q6T4P5 718 aa17.58■□□□□ 0.4
AC016556.1-201ENST00000510004 PIAS4Q8N2W9 510 aaPredicted RBP17.54■□□□□ 0.4
AC016556.1-201ENST00000510004 PPP6R1Q9UPN7 881 aa17.23■□□□□ 0.35
AC016556.1-201ENST00000510004 ADRA2BP18089 450 aa17.21■□□□□ 0.35
AC016556.1-201ENST00000510004 SCAF1Q9H7N4 1312 aaKnown RBP15.96■□□□□ 0.15
AC016556.1-201ENST00000510004 DMRT2Q9Y5R5 561 aa15.93■□□□□ 0.14
AC016556.1-201ENST00000510004 MAPK8IP2Q13387 824 aaPredicted RBP15.84■□□□□ 0.13
AC016556.1-201ENST00000510004 CACNB1Q02641 598 aaPredicted RBP15.42■□□□□ 0.06
AC016556.1-201ENST00000510004 DCAF8L1A6NGE4 600 aa15.34■□□□□ 0.05
AC016556.1-201ENST00000510004 PPP4R3CPQ6ZMV5 832 aa15.3■□□□□ 0.04
AC016556.1-201ENST00000510004 HOXD11P31277 338 aaPredicted RBP15.21■□□□□ 0.03
AC016556.1-201ENST00000510004 CNKSR2Q8WXI2 1034 aa15.14■□□□□ 0.01
AC016556.1-201ENST00000510004 RNF39Q9H2S5 420 aa15.08■□□□□ 0
AC016556.1-201ENST00000510004 RNF216Q9NWF9 866 aaPredicted RBP15.07■□□□□ 0
AC016556.1-201ENST00000510004 C1QBPQ07021 282 aaKnown RBP14.92□□□□□ -0.02
AC016556.1-201ENST00000510004 DNAJC5BQ9UF47 199 aa14.84□□□□□ -0.03
AC016556.1-201ENST00000510004 NCBP3Q53F19 620 aaKnown RBP14.77□□□□□ -0.05
AC016556.1-201ENST00000510004 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.57□□□□□ -0.08
AC016556.1-201ENST00000510004 NPM3O75607 178 aaKnown RBP14.4□□□□□ -0.1
AC016556.1-201ENST00000510004 U3KPZ7 1027 aaPredicted RBP14.14□□□□□ -0.15
AC016556.1-201ENST00000510004 CAPN15O75808 1086 aa14.09□□□□□ -0.15
AC016556.1-201ENST00000510004 DSG3P32926 999 aa14□□□□□ -0.17
AC016556.1-201ENST00000510004 SPINK5Q9NQ38 1064 aaPredicted RBP13.99□□□□□ -0.17
AC016556.1-201ENST00000510004 APLP2Q06481 763 aa13.96□□□□□ -0.17
AC016556.1-201ENST00000510004 POTEHQ6S545 545 aa13.94□□□□□ -0.18
AC016556.1-201ENST00000510004 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.83□□□□□ -0.2
AC016556.1-201ENST00000510004 KCNA4P22459 653 aa13.83□□□□□ -0.2
AC016556.1-201ENST00000510004 HNRNPUL2Q1KMD3 747 aaKnown RBP13.83□□□□□ -0.2
AC016556.1-201ENST00000510004 ZNF219Q9P2Y4 722 aaPredicted RBP13.83□□□□□ -0.2
AC016556.1-201ENST00000510004 TRHP20396 242 aaPredicted RBP13.78□□□□□ -0.2
AC016556.1-201ENST00000510004 SLC4A2P04920 1241 aa13.77□□□□□ -0.21
AC016556.1-201ENST00000510004 SAMD1Q6SPF0 538 aaPredicted RBP13.69□□□□□ -0.22
AC016556.1-201ENST00000510004 ABCB7O75027 752 aa13.68□□□□□ -0.22
AC016556.1-201ENST00000510004 RBM42Q9BTD8 480 aaKnown RBP13.54□□□□□ -0.24
AC016556.1-201ENST00000510004 MYCNP04198 464 aaPredicted RBP13.43□□□□□ -0.26
AC016556.1-201ENST00000510004 POLA2Q14181 598 aa13.31□□□□□ -0.28
AC016556.1-201ENST00000510004 CHRDL2Q6WN34 429 aa13.25□□□□□ -0.29
AC016556.1-201ENST00000510004 ZBTB12Q9Y330 459 aaPredicted RBP13.19□□□□□ -0.3
AC016556.1-201ENST00000510004 AKT1S1Q96B36 256 aa13.09□□□□□ -0.31
AC016556.1-201ENST00000510004 FOXD4L1Q9NU39 408 aa13.09□□□□□ -0.31
AC016556.1-201ENST00000510004 SLC4A1APQ9BWU0 796 aaKnown RBP13.08□□□□□ -0.32
AC016556.1-201ENST00000510004 ATF5Q9Y2D1 282 aaPredicted RBP12.95□□□□□ -0.34
AC016556.1-201ENST00000510004 REM2Q8IYK8 340 aaPredicted RBP12.91□□□□□ -0.34
AC016556.1-201ENST00000510004 OSCARQ8IYS5 282 aa12.9□□□□□ -0.34
AC016556.1-201ENST00000510004 SP7Q8TDD2 431 aaPredicted RBP12.9□□□□□ -0.34
AC016556.1-201ENST00000510004 PIP4P2Q8N4L2 257 aa12.83□□□□□ -0.36
AC016556.1-201ENST00000510004 PITPNM1O00562 1244 aa12.77□□□□□ -0.37
AC016556.1-201ENST00000510004 ATXN8OSP0DMR3 200 aa12.76□□□□□ -0.37
AC016556.1-201ENST00000510004 HAX1O00165 279 aa12.73□□□□□ -0.37
AC016556.1-201ENST00000510004 FXR2P51116 673 aaKnown RBP eCLIP12.71□□□□□ -0.37
AC016556.1-201ENST00000510004 FBLN2P98095 1184 aa12.71□□□□□ -0.37
AC016556.1-201ENST00000510004 SPDYE2BA6NHP3 402 aa12.67□□□□□ -0.38
AC016556.1-201ENST00000510004 SPDYE6P0CI01 402 aa12.67□□□□□ -0.38
AC016556.1-201ENST00000510004 SPDYE2Q495Y8 402 aa12.67□□□□□ -0.38
AC016556.1-201ENST00000510004 ZBTB22O15209 634 aa12.64□□□□□ -0.39
AC016556.1-201ENST00000510004 SPDYE1Q8NFV5 336 aaPredicted RBP12.54□□□□□ -0.4
AC016556.1-201ENST00000510004 CLEC11AQ9Y240 323 aa12.49□□□□□ -0.41
AC016556.1-201ENST00000510004 PRKAR2AP13861 404 aaKnown RBP12.46□□□□□ -0.41
AC016556.1-201ENST00000510004 ZNF692Q9BU19 519 aaPredicted RBP12.44□□□□□ -0.42
AC016556.1-201ENST00000510004 EVX2Q03828 476 aa12.4□□□□□ -0.42
AC016556.1-201ENST00000510004 SSUH2Q9Y2M2 353 aa12.4□□□□□ -0.42
AC016556.1-201ENST00000510004 MKRN4PQ13434 485 aaPredicted RBP12.37□□□□□ -0.43
AC016556.1-201ENST00000510004 C19orf67A6NJJ6 358 aa12.32□□□□□ -0.44
AC016556.1-201ENST00000510004 PRR29P0C7W0 189 aa12.26□□□□□ -0.45
AC016556.1-201ENST00000510004 PABPN1Q86U42 306 aaKnown RBP eCLIP12.22□□□□□ -0.45
AC016556.1-201ENST00000510004 GABBR2O75899 941 aa12.2□□□□□ -0.46
AC016556.1-201ENST00000510004 CHADLQ6NUI6 762 aa12.19□□□□□ -0.46
AC016556.1-201ENST00000510004 LHX8Q68G74 356 aa12.09□□□□□ -0.47
AC016556.1-201ENST00000510004 CLCN6P51797 869 aa12.08□□□□□ -0.48
AC016556.1-201ENST00000510004 CD44P16070 742 aaKnown RBP12.07□□□□□ -0.48
AC016556.1-201ENST00000510004 FARP1Q9Y4F1 1045 aaPredicted RBP12.04□□□□□ -0.48
AC016556.1-201ENST00000510004 STAG3Q9UJ98 1225 aa11.94□□□□□ -0.5
AC016556.1-201ENST00000510004 DCBLD2Q96PD2 775 aa11.91□□□□□ -0.5
AC016556.1-201ENST00000510004 ZNF579Q8NAF0 562 aaKnown RBP11.87□□□□□ -0.51
AC016556.1-201ENST00000510004 POTEIP0CG38 1075 aa11.85□□□□□ -0.51
AC016556.1-201ENST00000510004 CSRNP3Q8WYN3 585 aa11.84□□□□□ -0.51
AC016556.1-201ENST00000510004 ZRANB1Q9UGI0 708 aa11.84□□□□□ -0.51
AC016556.1-201ENST00000510004 PAK3O75914 559 aaPredicted RBP11.82□□□□□ -0.52
AC016556.1-201ENST00000510004 CREBZFQ9NS37 354 aa11.79□□□□□ -0.52
AC016556.1-201ENST00000510004 SPDYE4A6NLX3 237 aa11.75□□□□□ -0.53
AC016556.1-201ENST00000510004 NPM1P06748 294 aaKnown RBP eCLIP11.72□□□□□ -0.53
AC016556.1-201ENST00000510004 GALR2O43603 387 aaPredicted RBP11.68□□□□□ -0.54
AC016556.1-201ENST00000510004 PLSCR2Q9NRY7 297 aa11.67□□□□□ -0.54
AC016556.1-201ENST00000510004 PHF12Q96QT6 1004 aa11.6□□□□□ -0.55
AC016556.1-201ENST00000510004 EHMT2Q96KQ7 1210 aa11.59□□□□□ -0.55
AC016556.1-201ENST00000510004 MNX1P50219 401 aaPredicted RBP11.52□□□□□ -0.57
AC016556.1-201ENST00000510004 OTUD5Q96G74 571 aa11.52□□□□□ -0.57
AC016556.1-201ENST00000510004 SLC39A7Q92504 469 aa11.48□□□□□ -0.57
AC016556.1-201ENST00000510004 ASTLQ6HA08 431 aaPredicted RBP11.46□□□□□ -0.57
AC016556.1-201ENST00000510004 C7P10643 843 aa11.45□□□□□ -0.58
AC016556.1-201ENST00000510004 MS4A3Q96HJ5 214 aa11.45□□□□□ -0.58
AC016556.1-201ENST00000510004 METRNQ9UJH8 293 aa11.45□□□□□ -0.58
AC016556.1-201ENST00000510004 POTEB2H3BUK9 544 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms