RNA–Protein interactions for RNA: ENST00000509823.1

CENPE-205, Transcript of centromere protein E, humanhuman

TSL 3

Gene CENPE, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPE-205ENST00000509823 AEBP2Q6ZN18 517 aaPredicted RBP33.34■■■□□ 2.93
CENPE-205ENST00000509823 CHIC1Q5VXU3 224 aa31.95■■■□□ 2.71
CENPE-205ENST00000509823 SENP3Q9H4L4 574 aaPredicted RBP28.17■■■□□ 2.1
CENPE-205ENST00000509823 PHF23Q9BUL5 403 aaPredicted RBP28.16■■■□□ 2.1
CENPE-205ENST00000509823 FOXD1Q16676 465 aa26.34■■□□□ 1.81
CENPE-205ENST00000509823 POTEDQ86YR6 584 aa25.98■■□□□ 1.75
CENPE-205ENST00000509823 PLPPR3Q6T4P5 718 aa25.63■■□□□ 1.69
CENPE-205ENST00000509823 PPP6R1Q9UPN7 881 aa25.03■■□□□ 1.6
CENPE-205ENST00000509823 ADRA2BP18089 450 aa24.92■■□□□ 1.58
CENPE-205ENST00000509823 PIAS4Q8N2W9 510 aaPredicted RBP24.61■■□□□ 1.53
CENPE-205ENST00000509823 MSH5O43196 834 aa24.34■■□□□ 1.49
CENPE-205ENST00000509823 MAPK8IP2Q13387 824 aaPredicted RBP22.8■■□□□ 1.24
CENPE-205ENST00000509823 SCAF1Q9H7N4 1312 aaKnown RBP22.6■■□□□ 1.21
CENPE-205ENST00000509823 PPP4R3CPQ6ZMV5 832 aa22.59■■□□□ 1.21
CENPE-205ENST00000509823 DMRT2Q9Y5R5 561 aa22.47■■□□□ 1.19
CENPE-205ENST00000509823 CNKSR2Q8WXI2 1034 aa22.02■■□□□ 1.12
CENPE-205ENST00000509823 HOXD11P31277 338 aaPredicted RBP21.83■■□□□ 1.09
CENPE-205ENST00000509823 RNF216Q9NWF9 866 aaPredicted RBP21.73■■□□□ 1.07
CENPE-205ENST00000509823 NCBP3Q53F19 620 aaKnown RBP21.72■■□□□ 1.07
CENPE-205ENST00000509823 NPM3O75607 178 aaKnown RBP21.56■■□□□ 1.04
CENPE-205ENST00000509823 KCNA4P22459 653 aa21.54■■□□□ 1.04
CENPE-205ENST00000509823 CACNB1Q02641 598 aaPredicted RBP21.49■■□□□ 1.03
CENPE-205ENST00000509823 DCAF8L1A6NGE4 600 aa21.43■■□□□ 1.02
CENPE-205ENST00000509823 DNAJC5BQ9UF47 199 aa21■□□□□ 0.95
CENPE-205ENST00000509823 RNF39Q9H2S5 420 aa20.91■□□□□ 0.94
CENPE-205ENST00000509823 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.71■□□□□ 0.91
CENPE-205ENST00000509823 SLC4A2P04920 1241 aa20.55■□□□□ 0.88
CENPE-205ENST00000509823 C1QBPQ07021 282 aaKnown RBP20.55■□□□□ 0.88
CENPE-205ENST00000509823 U3KPZ7 1027 aaPredicted RBP20.42■□□□□ 0.86
CENPE-205ENST00000509823 SLC4A1APQ9BWU0 796 aaKnown RBP20.33■□□□□ 0.85
CENPE-205ENST00000509823 POTEHQ6S545 545 aa20.05■□□□□ 0.8
CENPE-205ENST00000509823 SPINK5Q9NQ38 1064 aaPredicted RBP20.02■□□□□ 0.8
CENPE-205ENST00000509823 ZBTB22O15209 634 aa19.89■□□□□ 0.77
CENPE-205ENST00000509823 FOXD4L1Q9NU39 408 aa19.88■□□□□ 0.77
CENPE-205ENST00000509823 CAPN15O75808 1086 aa19.85■□□□□ 0.77
CENPE-205ENST00000509823 MYCNP04198 464 aaPredicted RBP19.83■□□□□ 0.77
CENPE-205ENST00000509823 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.8■□□□□ 0.76
CENPE-205ENST00000509823 HNRNPUL2Q1KMD3 747 aaKnown RBP19.8■□□□□ 0.76
CENPE-205ENST00000509823 SAMD1Q6SPF0 538 aaPredicted RBP19.76■□□□□ 0.75
CENPE-205ENST00000509823 DSG3P32926 999 aa19.73■□□□□ 0.75
CENPE-205ENST00000509823 TRHP20396 242 aaPredicted RBP19.65■□□□□ 0.74
CENPE-205ENST00000509823 APLP2Q06481 763 aa19.65■□□□□ 0.74
CENPE-205ENST00000509823 ZNF219Q9P2Y4 722 aaPredicted RBP19.57■□□□□ 0.72
CENPE-205ENST00000509823 ATF5Q9Y2D1 282 aaPredicted RBP19.52■□□□□ 0.72
CENPE-205ENST00000509823 ABCB7O75027 752 aa19.48■□□□□ 0.71
CENPE-205ENST00000509823 CSRNP3Q8WYN3 585 aa19.31■□□□□ 0.68
CENPE-205ENST00000509823 POLA2Q14181 598 aa19.26■□□□□ 0.67
CENPE-205ENST00000509823 ATXN8OSP0DMR3 200 aa19.21■□□□□ 0.67
CENPE-205ENST00000509823 EHMT2Q96KQ7 1210 aa19.19■□□□□ 0.66
CENPE-205ENST00000509823 ZBTB12Q9Y330 459 aaPredicted RBP18.76■□□□□ 0.59
CENPE-205ENST00000509823 RBM42Q9BTD8 480 aaKnown RBP18.65■□□□□ 0.58
CENPE-205ENST00000509823 MKRN4PQ13434 485 aaPredicted RBP18.63■□□□□ 0.57
CENPE-205ENST00000509823 OSCARQ8IYS5 282 aa18.62■□□□□ 0.57
CENPE-205ENST00000509823 FBLN2P98095 1184 aa18.5■□□□□ 0.55
CENPE-205ENST00000509823 AKT1S1Q96B36 256 aa18.39■□□□□ 0.53
CENPE-205ENST00000509823 SPDYE2BA6NHP3 402 aa18.29■□□□□ 0.52
CENPE-205ENST00000509823 SPDYE6P0CI01 402 aa18.29■□□□□ 0.52
CENPE-205ENST00000509823 SPDYE2Q495Y8 402 aa18.29■□□□□ 0.52
CENPE-205ENST00000509823 REM2Q8IYK8 340 aaPredicted RBP18.28■□□□□ 0.52
CENPE-205ENST00000509823 CHRDL2Q6WN34 429 aa18.18■□□□□ 0.5
CENPE-205ENST00000509823 SSUH2Q9Y2M2 353 aa18.17■□□□□ 0.5
CENPE-205ENST00000509823 ZNF692Q9BU19 519 aaPredicted RBP18.15■□□□□ 0.5
CENPE-205ENST00000509823 SP7Q8TDD2 431 aaPredicted RBP18.09■□□□□ 0.49
CENPE-205ENST00000509823 PITPNM1O00562 1244 aa18.07■□□□□ 0.48
CENPE-205ENST00000509823 PABPN1Q86U42 306 aaKnown RBP eCLIP17.93■□□□□ 0.46
CENPE-205ENST00000509823 PIP4P2Q8N4L2 257 aa17.88■□□□□ 0.45
CENPE-205ENST00000509823 FXR2P51116 673 aaKnown RBP eCLIP17.85■□□□□ 0.45
CENPE-205ENST00000509823 SPDYE1Q8NFV5 336 aaPredicted RBP17.85■□□□□ 0.45
CENPE-205ENST00000509823 SPDYE4A6NLX3 237 aa17.84■□□□□ 0.45
CENPE-205ENST00000509823 CLEC11AQ9Y240 323 aa17.81■□□□□ 0.44
CENPE-205ENST00000509823 PRR29P0C7W0 189 aa17.58■□□□□ 0.4
CENPE-205ENST00000509823 PRKAR2AP13861 404 aaKnown RBP17.57■□□□□ 0.4
CENPE-205ENST00000509823 PROM2Q8N271 834 aa17.56■□□□□ 0.4
CENPE-205ENST00000509823 CHADLQ6NUI6 762 aa17.51■□□□□ 0.39
CENPE-205ENST00000509823 STAG3Q9UJ98 1225 aa17.42■□□□□ 0.38
CENPE-205ENST00000509823 FKBP8Q14318 412 aa17.39■□□□□ 0.37
CENPE-205ENST00000509823 HAX1O00165 279 aa17.37■□□□□ 0.37
CENPE-205ENST00000509823 EVX2Q03828 476 aa17.37■□□□□ 0.37
CENPE-205ENST00000509823 CREBZFQ9NS37 354 aa17.34■□□□□ 0.37
CENPE-205ENST00000509823 FARP1Q9Y4F1 1045 aaPredicted RBP17.27■□□□□ 0.36
CENPE-205ENST00000509823 C19orf67A6NJJ6 358 aa17.26■□□□□ 0.35
CENPE-205ENST00000509823 MNX1P50219 401 aaPredicted RBP17.15■□□□□ 0.34
CENPE-205ENST00000509823 PLSCR2Q9NRY7 297 aa17.1■□□□□ 0.33
CENPE-205ENST00000509823 CD44P16070 742 aaKnown RBP17.03■□□□□ 0.32
CENPE-205ENST00000509823 LHX8Q68G74 356 aa16.95■□□□□ 0.3
CENPE-205ENST00000509823 MIER1Q8N108 512 aa16.95■□□□□ 0.3
CENPE-205ENST00000509823 GABBR2O75899 941 aa16.9■□□□□ 0.3
CENPE-205ENST00000509823 NPM1P06748 294 aaKnown RBP eCLIP16.88■□□□□ 0.29
CENPE-205ENST00000509823 ZRANB1Q9UGI0 708 aa16.85■□□□□ 0.29
CENPE-205ENST00000509823 PLCD3Q8N3E9 789 aa16.82■□□□□ 0.28
CENPE-205ENST00000509823 ZNF579Q8NAF0 562 aaKnown RBP16.8■□□□□ 0.28
CENPE-205ENST00000509823 FBXO3Q9UK99 471 aa16.8■□□□□ 0.28
CENPE-205ENST00000509823 PLEKHG5O94827 1062 aa16.74■□□□□ 0.27
CENPE-205ENST00000509823 PHF12Q96QT6 1004 aa16.72■□□□□ 0.27
CENPE-205ENST00000509823 RASEFQ8IZ41 740 aa16.71■□□□□ 0.27
CENPE-205ENST00000509823 VASPP50552 380 aaPredicted RBP16.69■□□□□ 0.26
CENPE-205ENST00000509823 PAK3O75914 559 aaPredicted RBP16.68■□□□□ 0.26
CENPE-205ENST00000509823 TSPYL2Q9H2G4 693 aaPredicted RBP16.68■□□□□ 0.26
CENPE-205ENST00000509823 NUBP1P53384 320 aa16.67■□□□□ 0.26
CENPE-205ENST00000509823 POTEIP0CG38 1075 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms