RNA–Protein interactions for RNA: ENST00000509784.1

CALCOCO2-216, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 4

Gene CALCOCO2, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-216ENST00000509784 AEBP2Q6ZN18 517 aaPredicted RBP13.68□□□□□ -0.22
CALCOCO2-216ENST00000509784 CHIC1Q5VXU3 224 aa13.62□□□□□ -0.23
CALCOCO2-216ENST00000509784 PHF23Q9BUL5 403 aaPredicted RBP12.03□□□□□ -0.48
CALCOCO2-216ENST00000509784 SENP3Q9H4L4 574 aaPredicted RBP11.54□□□□□ -0.56
CALCOCO2-216ENST00000509784 PLPPR3Q6T4P5 718 aa11.19□□□□□ -0.62
CALCOCO2-216ENST00000509784 FOXD1Q16676 465 aa10.7□□□□□ -0.7
CALCOCO2-216ENST00000509784 ADRA2BP18089 450 aa10.55□□□□□ -0.72
CALCOCO2-216ENST00000509784 PPP6R1Q9UPN7 881 aa10.53□□□□□ -0.72
CALCOCO2-216ENST00000509784 PIAS4Q8N2W9 510 aaPredicted RBP10.17□□□□□ -0.78
CALCOCO2-216ENST00000509784 KCNA4P22459 653 aa10.02□□□□□ -0.81
CALCOCO2-216ENST00000509784 PPP4R3CPQ6ZMV5 832 aa9.92□□□□□ -0.82
CALCOCO2-216ENST00000509784 MSH5O43196 834 aa9.73□□□□□ -0.85
CALCOCO2-216ENST00000509784 NCBP3Q53F19 620 aaKnown RBP9.73□□□□□ -0.85
CALCOCO2-216ENST00000509784 EHMT2Q96KQ7 1210 aa9.68□□□□□ -0.86
CALCOCO2-216ENST00000509784 SCAF1Q9H7N4 1312 aaKnown RBP9.62□□□□□ -0.87
CALCOCO2-216ENST00000509784 NPM3O75607 178 aaKnown RBP9.59□□□□□ -0.87
CALCOCO2-216ENST00000509784 SLC4A1APQ9BWU0 796 aaKnown RBP9.59□□□□□ -0.87
CALCOCO2-216ENST00000509784 CNKSR2Q8WXI2 1034 aa9.55□□□□□ -0.88
CALCOCO2-216ENST00000509784 MAPK8IP2Q13387 824 aaPredicted RBP9.49□□□□□ -0.89
CALCOCO2-216ENST00000509784 CSRNP3Q8WYN3 585 aa9.4□□□□□ -0.9
CALCOCO2-216ENST00000509784 POTEDQ86YR6 584 aa9.39□□□□□ -0.91
CALCOCO2-216ENST00000509784 RNF216Q9NWF9 866 aaPredicted RBP9.29□□□□□ -0.92
CALCOCO2-216ENST00000509784 DMRT2Q9Y5R5 561 aa9.27□□□□□ -0.93
CALCOCO2-216ENST00000509784 ZBTB22O15209 634 aa9.22□□□□□ -0.93
CALCOCO2-216ENST00000509784 DNAJC5BQ9UF47 199 aa9.19□□□□□ -0.94
CALCOCO2-216ENST00000509784 HOXD11P31277 338 aaPredicted RBP9.17□□□□□ -0.94
CALCOCO2-216ENST00000509784 FOXD4L1Q9NU39 408 aa9.12□□□□□ -0.95
CALCOCO2-216ENST00000509784 SLC4A2P04920 1241 aa8.99□□□□□ -0.97
CALCOCO2-216ENST00000509784 DCAF8L1A6NGE4 600 aa8.91□□□□□ -0.98
CALCOCO2-216ENST00000509784 MYCNP04198 464 aaPredicted RBP8.84□□□□□ -0.99
CALCOCO2-216ENST00000509784 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.79□□□□□ -11e-7■■■□□ 18.5
CALCOCO2-216ENST00000509784 ATXN8OSP0DMR3 200 aa8.75□□□□□ -1.01
CALCOCO2-216ENST00000509784 U3KPZ7 1027 aaPredicted RBP8.66□□□□□ -1.02
CALCOCO2-216ENST00000509784 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.62□□□□□ -1.03
CALCOCO2-216ENST00000509784 HNRNPUL2Q1KMD3 747 aaKnown RBP8.62□□□□□ -1.03
CALCOCO2-216ENST00000509784 ATF5Q9Y2D1 282 aaPredicted RBP8.62□□□□□ -1.03
CALCOCO2-216ENST00000509784 SAMD1Q6SPF0 538 aaPredicted RBP8.61□□□□□ -1.03
CALCOCO2-216ENST00000509784 FKBP8Q14318 412 aa8.5□□□□□ -1.05
CALCOCO2-216ENST00000509784 APLP2Q06481 763 aa8.47□□□□□ -1.05
CALCOCO2-216ENST00000509784 ZNF219Q9P2Y4 722 aaPredicted RBP8.44□□□□□ -1.06
CALCOCO2-216ENST00000509784 RNF39Q9H2S5 420 aa8.37□□□□□ -1.07
CALCOCO2-216ENST00000509784 TRHP20396 242 aaPredicted RBP8.35□□□□□ -1.07
CALCOCO2-216ENST00000509784 SPINK5Q9NQ38 1064 aaPredicted RBP8.35□□□□□ -1.07
CALCOCO2-216ENST00000509784 CAPN15O75808 1086 aa8.31□□□□□ -1.08
CALCOCO2-216ENST00000509784 C1QBPQ07021 282 aaKnown RBP8.28□□□□□ -1.08
CALCOCO2-216ENST00000509784 POLA2Q14181 598 aa8.27□□□□□ -1.09
CALCOCO2-216ENST00000509784 MKRN4PQ13434 485 aaPredicted RBP8.25□□□□□ -1.09
CALCOCO2-216ENST00000509784 RTN4Q9NQC3 1192 aaKnown RBP8.24□□□□□ -1.09
CALCOCO2-216ENST00000509784 FBLN2P98095 1184 aa8.22□□□□□ -1.09
CALCOCO2-216ENST00000509784 SPDYE4A6NLX3 237 aa8.21□□□□□ -1.1
CALCOCO2-216ENST00000509784 AMER1Q5JTC6 1135 aaPredicted RBP8.21□□□□□ -1.1
CALCOCO2-216ENST00000509784 ABCB7O75027 752 aa8.19□□□□□ -1.1
CALCOCO2-216ENST00000509784 ZBTB12Q9Y330 459 aaPredicted RBP8.11□□□□□ -1.11
CALCOCO2-216ENST00000509784 FBXO3Q9UK99 471 aa8.09□□□□□ -1.11
CALCOCO2-216ENST00000509784 DSG3P32926 999 aa8.08□□□□□ -1.12
CALCOCO2-216ENST00000509784 PROM2Q8N271 834 aa8.06□□□□□ -1.12
CALCOCO2-216ENST00000509784 VASPP50552 380 aaPredicted RBP7.98□□□□□ -1.13
CALCOCO2-216ENST00000509784 CACNB1Q02641 598 aaPredicted RBP7.98□□□□□ -1.13
CALCOCO2-216ENST00000509784 OSCARQ8IYS5 282 aa7.97□□□□□ -1.13
CALCOCO2-216ENST00000509784 ZNF692Q9BU19 519 aaPredicted RBP7.97□□□□□ -1.13
CALCOCO2-216ENST00000509784 SPDYE2BA6NHP3 402 aa7.91□□□□□ -1.14
CALCOCO2-216ENST00000509784 SPDYE6P0CI01 402 aa7.91□□□□□ -1.14
CALCOCO2-216ENST00000509784 SPDYE2Q495Y8 402 aa7.91□□□□□ -1.14
CALCOCO2-216ENST00000509784 IFNLR1Q8IU57 520 aaPredicted RBP7.9□□□□□ -1.14
CALCOCO2-216ENST00000509784 SLC24A1O60721 1099 aa7.89□□□□□ -1.15
CALCOCO2-216ENST00000509784 SSUH2Q9Y2M2 353 aa7.88□□□□□ -1.15
CALCOCO2-216ENST00000509784 PABPN1Q86U42 306 aaKnown RBP eCLIP7.87□□□□□ -1.15
CALCOCO2-216ENST00000509784 KLHL34Q8N239 644 aa7.82□□□□□ -1.16
CALCOCO2-216ENST00000509784 STAG3Q9UJ98 1225 aa7.82□□□□□ -1.16
CALCOCO2-216ENST00000509784 PLCD3Q8N3E9 789 aa7.78□□□□□ -1.16
CALCOCO2-216ENST00000509784 MIER1Q8N108 512 aa7.77□□□□□ -1.17
CALCOCO2-216ENST00000509784 SPOCK2Q92563 424 aa7.76□□□□□ -1.17
CALCOCO2-216ENST00000509784 DCAF8L2P0C7V8 631 aa7.74□□□□□ -1.17
CALCOCO2-216ENST00000509784 PKD2Q13563 968 aa7.74□□□□□ -1.17
CALCOCO2-216ENST00000509784 PLEKHG5O94827 1062 aa7.68□□□□□ -1.18
CALCOCO2-216ENST00000509784 RBM42Q9BTD8 480 aaKnown RBP7.67□□□□□ -1.18
CALCOCO2-216ENST00000509784 ECM2O94769 699 aaPredicted RBP7.66□□□□□ -1.18
CALCOCO2-216ENST00000509784 ZBTB47Q9UFB7 747 aaPredicted RBP7.65□□□□□ -1.18
CALCOCO2-216ENST00000509784 AKT1S1Q96B36 256 aa7.64□□□□□ -1.19
CALCOCO2-216ENST00000509784 SPDYE1Q8NFV5 336 aaPredicted RBP7.63□□□□□ -1.19
CALCOCO2-216ENST00000509784 CIZ1Q9ULV3 898 aaPredicted RBP7.62□□□□□ -1.19
CALCOCO2-216ENST00000509784 CLEC11AQ9Y240 323 aa7.62□□□□□ -1.19
CALCOCO2-216ENST00000509784 PLCB2Q00722 1185 aa7.6□□□□□ -1.19
CALCOCO2-216ENST00000509784 REM2Q8IYK8 340 aaPredicted RBP7.59□□□□□ -1.19
CALCOCO2-216ENST00000509784 RGL2O15211 777 aa7.57□□□□□ -1.2
CALCOCO2-216ENST00000509784 PRR29P0C7W0 189 aa7.57□□□□□ -1.2
CALCOCO2-216ENST00000509784 HAP1P54257 671 aaPredicted RBP7.53□□□□□ -1.2
CALCOCO2-216ENST00000509784 CREBZFQ9NS37 354 aa7.53□□□□□ -1.2
CALCOCO2-216ENST00000509784 NPM1P06748 294 aaKnown RBP eCLIP7.52□□□□□ -1.21
CALCOCO2-216ENST00000509784 NUBP1P53384 320 aa7.51□□□□□ -1.21
CALCOCO2-216ENST00000509784 PITPNM1O00562 1244 aa7.5□□□□□ -1.21
CALCOCO2-216ENST00000509784 GSE1Q14687 1217 aa7.5□□□□□ -1.21
CALCOCO2-216ENST00000509784 DCAF8Q5TAQ9 597 aa7.5□□□□□ -1.21
CALCOCO2-216ENST00000509784 BBXQ8WY36 941 aaPredicted RBP7.5□□□□□ -1.21
CALCOCO2-216ENST00000509784 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.5□□□□□ -1.21
CALCOCO2-216ENST00000509784 TRIM41Q8WV44 630 aa7.49□□□□□ -1.21
CALCOCO2-216ENST00000509784 MNX1P50219 401 aaPredicted RBP7.48□□□□□ -1.21
CALCOCO2-216ENST00000509784 CHGAP10645 457 aaKnown RBP7.47□□□□□ -1.21
CALCOCO2-216ENST00000509784 PAXIP1Q6ZW49 1069 aaPredicted RBP7.45□□□□□ -1.22
CALCOCO2-216ENST00000509784 FAM212AQ96EL1 285 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms