RNA–Protein interactions for RNA: ENST00000509559.1

LINC02496-201, Transcript of long intergenic non-protein coding RNA 2496, humanhuman

TSL 3 BASIC

Gene LINC02496, Length 584 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02496-201ENST00000509559 AEBP2Q6ZN18 517 aaPredicted RBP20.16■□□□□ 0.82
LINC02496-201ENST00000509559 CHIC1Q5VXU3 224 aa19.81■□□□□ 0.76
LINC02496-201ENST00000509559 PHF23Q9BUL5 403 aaPredicted RBP17.32■□□□□ 0.36
LINC02496-201ENST00000509559 SENP3Q9H4L4 574 aaPredicted RBP17.31■□□□□ 0.36
LINC02496-201ENST00000509559 PLPPR3Q6T4P5 718 aa16.19■□□□□ 0.18
LINC02496-201ENST00000509559 FOXD1Q16676 465 aa15.94■□□□□ 0.14
LINC02496-201ENST00000509559 ADRA2BP18089 450 aa15.34■□□□□ 0.05
LINC02496-201ENST00000509559 PPP6R1Q9UPN7 881 aa15.28■□□□□ 0.04
LINC02496-201ENST00000509559 PIAS4Q8N2W9 510 aaPredicted RBP15.15■□□□□ 0.02
LINC02496-201ENST00000509559 MSH5O43196 834 aa14.85□□□□□ -0.03
LINC02496-201ENST00000509559 SCAF1Q9H7N4 1312 aaKnown RBP14.25□□□□□ -0.13
LINC02496-201ENST00000509559 PPP4R3CPQ6ZMV5 832 aa14.22□□□□□ -0.13
LINC02496-201ENST00000509559 NCBP3Q53F19 620 aaKnown RBP13.99□□□□□ -0.17
LINC02496-201ENST00000509559 POTEDQ86YR6 584 aa13.92□□□□□ -0.18
LINC02496-201ENST00000509559 MAPK8IP2Q13387 824 aaPredicted RBP13.89□□□□□ -0.19
LINC02496-201ENST00000509559 CNKSR2Q8WXI2 1034 aa13.86□□□□□ -0.19
LINC02496-201ENST00000509559 KCNA4P22459 653 aa13.83□□□□□ -0.2
LINC02496-201ENST00000509559 DMRT2Q9Y5R5 561 aa13.75□□□□□ -0.21
LINC02496-201ENST00000509559 NPM3O75607 178 aaKnown RBP13.6□□□□□ -0.23
LINC02496-201ENST00000509559 RNF216Q9NWF9 866 aaPredicted RBP13.56□□□□□ -0.24
LINC02496-201ENST00000509559 HOXD11P31277 338 aaPredicted RBP13.45□□□□□ -0.26
LINC02496-201ENST00000509559 DCAF8L1A6NGE4 600 aa13.32□□□□□ -0.28
LINC02496-201ENST00000509559 SLC4A1APQ9BWU0 796 aaKnown RBP13.28□□□□□ -0.28
LINC02496-201ENST00000509559 DNAJC5BQ9UF47 199 aa13.15□□□□□ -0.3
LINC02496-201ENST00000509559 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.97□□□□□ -0.33
LINC02496-201ENST00000509559 EHMT2Q96KQ7 1210 aa12.89□□□□□ -0.35
LINC02496-201ENST00000509559 FOXD4L1Q9NU39 408 aa12.81□□□□□ -0.36
LINC02496-201ENST00000509559 SLC4A2P04920 1241 aa12.77□□□□□ -0.37
LINC02496-201ENST00000509559 MYCNP04198 464 aaPredicted RBP12.66□□□□□ -0.38
LINC02496-201ENST00000509559 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.65□□□□□ -0.38
LINC02496-201ENST00000509559 HNRNPUL2Q1KMD3 747 aaKnown RBP12.65□□□□□ -0.38
LINC02496-201ENST00000509559 CSRNP3Q8WYN3 585 aa12.63□□□□□ -0.39
LINC02496-201ENST00000509559 ZBTB22O15209 634 aa12.62□□□□□ -0.39
LINC02496-201ENST00000509559 RNF39Q9H2S5 420 aa12.61□□□□□ -0.39
LINC02496-201ENST00000509559 U3KPZ7 1027 aaPredicted RBP12.59□□□□□ -0.39
LINC02496-201ENST00000509559 APLP2Q06481 763 aa12.58□□□□□ -0.4
LINC02496-201ENST00000509559 C1QBPQ07021 282 aaKnown RBP12.56□□□□□ -0.4
LINC02496-201ENST00000509559 SAMD1Q6SPF0 538 aaPredicted RBP12.55□□□□□ -0.4
LINC02496-201ENST00000509559 CACNB1Q02641 598 aaPredicted RBP12.42□□□□□ -0.42
LINC02496-201ENST00000509559 ATXN8OSP0DMR3 200 aa12.38□□□□□ -0.43
LINC02496-201ENST00000509559 CAPN15O75808 1086 aa12.35□□□□□ -0.43
LINC02496-201ENST00000509559 ZNF219Q9P2Y4 722 aaPredicted RBP12.29□□□□□ -0.44
LINC02496-201ENST00000509559 TRHP20396 242 aaPredicted RBP12.27□□□□□ -0.45
LINC02496-201ENST00000509559 SPINK5Q9NQ38 1064 aaPredicted RBP12.25□□□□□ -0.45
LINC02496-201ENST00000509559 ATF5Q9Y2D1 282 aaPredicted RBP12.15□□□□□ -0.46
LINC02496-201ENST00000509559 ABCB7O75027 752 aa12.04□□□□□ -0.48
LINC02496-201ENST00000509559 POLA2Q14181 598 aa12.03□□□□□ -0.48
LINC02496-201ENST00000509559 DSG3P32926 999 aa12.01□□□□□ -0.49
LINC02496-201ENST00000509559 ZBTB12Q9Y330 459 aaPredicted RBP11.94□□□□□ -0.5
LINC02496-201ENST00000509559 FBLN2P98095 1184 aa11.9□□□□□ -0.5
LINC02496-201ENST00000509559 MKRN4PQ13434 485 aaPredicted RBP11.63□□□□□ -0.55
LINC02496-201ENST00000509559 RBM42Q9BTD8 480 aaKnown RBP11.61□□□□□ -0.55
LINC02496-201ENST00000509559 OSCARQ8IYS5 282 aa11.58□□□□□ -0.56
LINC02496-201ENST00000509559 SPDYE2BA6NHP3 402 aa11.55□□□□□ -0.56
LINC02496-201ENST00000509559 SPDYE6P0CI01 402 aa11.55□□□□□ -0.56
LINC02496-201ENST00000509559 SPDYE2Q495Y8 402 aa11.55□□□□□ -0.56
LINC02496-201ENST00000509559 FKBP8Q14318 412 aa11.54□□□□□ -0.56
LINC02496-201ENST00000509559 SPDYE4A6NLX3 237 aa11.53□□□□□ -0.56
LINC02496-201ENST00000509559 ZNF692Q9BU19 519 aaPredicted RBP11.53□□□□□ -0.56
LINC02496-201ENST00000509559 AKT1S1Q96B36 256 aa11.4□□□□□ -0.58
LINC02496-201ENST00000509559 SSUH2Q9Y2M2 353 aa11.35□□□□□ -0.59
LINC02496-201ENST00000509559 PABPN1Q86U42 306 aaKnown RBP eCLIP11.33□□□□□ -0.6
LINC02496-201ENST00000509559 STAG3Q9UJ98 1225 aa11.26□□□□□ -0.61
LINC02496-201ENST00000509559 SPDYE1Q8NFV5 336 aaPredicted RBP11.24□□□□□ -0.61
LINC02496-201ENST00000509559 FBXO3Q9UK99 471 aa11.24□□□□□ -0.61
LINC02496-201ENST00000509559 REM2Q8IYK8 340 aaPredicted RBP11.23□□□□□ -0.61
LINC02496-201ENST00000509559 CLEC11AQ9Y240 323 aa11.21□□□□□ -0.61
LINC02496-201ENST00000509559 PROM2Q8N271 834 aa11.18□□□□□ -0.62
LINC02496-201ENST00000509559 PRR29P0C7W0 189 aa11.11□□□□□ -0.63
LINC02496-201ENST00000509559 PLEKHG5O94827 1062 aa11.09□□□□□ -0.63
LINC02496-201ENST00000509559 PITPNM1O00562 1244 aa11.08□□□□□ -0.64
LINC02496-201ENST00000509559 CHRDL2Q6WN34 429 aa11.03□□□□□ -0.64
LINC02496-201ENST00000509559 PLCD3Q8N3E9 789 aa11.02□□□□□ -0.65
LINC02496-201ENST00000509559 MIER1Q8N108 512 aa11.01□□□□□ -0.65
LINC02496-201ENST00000509559 VASPP50552 380 aaPredicted RBP10.96□□□□□ -0.65
LINC02496-201ENST00000509559 ZBTB47Q9UFB7 747 aaPredicted RBP10.93□□□□□ -0.66
LINC02496-201ENST00000509559 KLHL34Q8N239 644 aa10.91□□□□□ -0.66
LINC02496-201ENST00000509559 PRKAR2AP13861 404 aaKnown RBP10.87□□□□□ -0.67
LINC02496-201ENST00000509559 FXR2P51116 673 aaKnown RBP eCLIP10.86□□□□□ -0.67
LINC02496-201ENST00000509559 NPM1P06748 294 aaKnown RBP eCLIP10.84□□□□□ -0.67
LINC02496-201ENST00000509559 PIP4P2Q8N4L2 257 aa10.84□□□□□ -0.67
LINC02496-201ENST00000509559 CHADLQ6NUI6 762 aa10.83□□□□□ -0.68
LINC02496-201ENST00000509559 CREBZFQ9NS37 354 aa10.82□□□□□ -0.68
LINC02496-201ENST00000509559 FARP1Q9Y4F1 1045 aaPredicted RBP10.75□□□□□ -0.69
LINC02496-201ENST00000509559 IFNLR1Q8IU57 520 aaPredicted RBP10.74□□□□□ -0.69
LINC02496-201ENST00000509559 SPOCK2Q92563 424 aa10.73□□□□□ -0.69
LINC02496-201ENST00000509559 POTEHQ6S545 545 aa10.71□□□□□ -0.69
LINC02496-201ENST00000509559 PAK3O75914 559 aaPredicted RBP10.69□□□□□ -0.7
LINC02496-201ENST00000509559 FAM212AQ96EL1 285 aa10.64□□□□□ -0.71
LINC02496-201ENST00000509559 MNX1P50219 401 aaPredicted RBP10.63□□□□□ -0.71
LINC02496-201ENST00000509559 DCAF8Q5TAQ9 597 aa10.63□□□□□ -0.71
LINC02496-201ENST00000509559 HAX1O00165 279 aa10.62□□□□□ -0.71
LINC02496-201ENST00000509559 CIZ1Q9ULV3 898 aaPredicted RBP10.62□□□□□ -0.71
LINC02496-201ENST00000509559 GSE1Q14687 1217 aa10.61□□□□□ -0.71
LINC02496-201ENST00000509559 AMER1Q5JTC6 1135 aaPredicted RBP10.58□□□□□ -0.72
LINC02496-201ENST00000509559 TSPYL2Q9H2G4 693 aaPredicted RBP10.58□□□□□ -0.72
LINC02496-201ENST00000509559 CD44P16070 742 aaKnown RBP10.57□□□□□ -0.72
LINC02496-201ENST00000509559 NUBP1P53384 320 aa10.57□□□□□ -0.72
LINC02496-201ENST00000509559 RASEFQ8IZ41 740 aa10.53□□□□□ -0.72
LINC02496-201ENST00000509559 ZRANB1Q9UGI0 708 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms