RNA–Protein interactions for RNA: ENST00000509273.6

FBXO38-214, Transcript of F-box protein 38, humanhuman

TSL 3

Gene FBXO38, Length 1,262 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO38-214ENST00000509273 AEBP2Q6ZN18 517 aaPredicted RBP27.84■■■□□ 2.05
FBXO38-214ENST00000509273 CHIC1Q5VXU3 224 aa27.11■■□□□ 1.93
FBXO38-214ENST00000509273 PHF23Q9BUL5 403 aaPredicted RBP23.78■■□□□ 1.4
FBXO38-214ENST00000509273 SENP3Q9H4L4 574 aaPredicted RBP23.76■■□□□ 1.39
FBXO38-214ENST00000509273 PLPPR3Q6T4P5 718 aa22.01■■□□□ 1.11
FBXO38-214ENST00000509273 FOXD1Q16676 465 aa22■■□□□ 1.11
FBXO38-214ENST00000509273 POTEDQ86YR6 584 aa21.67■■□□□ 1.06
FBXO38-214ENST00000509273 ADRA2BP18089 450 aa21.06■□□□□ 0.96
FBXO38-214ENST00000509273 PPP6R1Q9UPN7 881 aa21.05■□□□□ 0.96
FBXO38-214ENST00000509273 PIAS4Q8N2W9 510 aaPredicted RBP20.78■□□□□ 0.92
FBXO38-214ENST00000509273 MSH5O43196 834 aa20.42■□□□□ 0.86
FBXO38-214ENST00000509273 SCAF1Q9H7N4 1312 aaKnown RBP19.39■□□□□ 0.69
FBXO38-214ENST00000509273 PPP4R3CPQ6ZMV5 832 aa19.36■□□□□ 0.69
FBXO38-214ENST00000509273 MAPK8IP2Q13387 824 aaPredicted RBP19.13■□□□□ 0.65
FBXO38-214ENST00000509273 NCBP3Q53F19 620 aaKnown RBP18.9■□□□□ 0.62
FBXO38-214ENST00000509273 DMRT2Q9Y5R5 561 aa18.9■□□□□ 0.62
FBXO38-214ENST00000509273 CNKSR2Q8WXI2 1034 aa18.86■□□□□ 0.61
FBXO38-214ENST00000509273 KCNA4P22459 653 aa18.72■□□□□ 0.59
FBXO38-214ENST00000509273 RNF216Q9NWF9 866 aaPredicted RBP18.51■□□□□ 0.55
FBXO38-214ENST00000509273 NPM3O75607 178 aaKnown RBP18.5■□□□□ 0.55
FBXO38-214ENST00000509273 HOXD11P31277 338 aaPredicted RBP18.44■□□□□ 0.54
FBXO38-214ENST00000509273 DCAF8L1A6NGE4 600 aa18.22■□□□□ 0.51
FBXO38-214ENST00000509273 DNAJC5BQ9UF47 199 aa17.94■□□□□ 0.46
FBXO38-214ENST00000509273 CACNB1Q02641 598 aaPredicted RBP17.93■□□□□ 0.46
FBXO38-214ENST00000509273 SLC4A1APQ9BWU0 796 aaKnown RBP17.86■□□□□ 0.45
FBXO38-214ENST00000509273 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.69■□□□□ 0.42
FBXO38-214ENST00000509273 SLC4A2P04920 1241 aa17.47■□□□□ 0.39
FBXO38-214ENST00000509273 RNF39Q9H2S5 420 aa17.43■□□□□ 0.38
FBXO38-214ENST00000509273 FOXD4L1Q9NU39 408 aa17.3■□□□□ 0.36
FBXO38-214ENST00000509273 C1QBPQ07021 282 aaKnown RBP17.27■□□□□ 0.36
FBXO38-214ENST00000509273 U3KPZ7 1027 aaPredicted RBP17.27■□□□□ 0.36
FBXO38-214ENST00000509273 EHMT2Q96KQ7 1210 aa17.19■□□□□ 0.34
FBXO38-214ENST00000509273 ZBTB22O15209 634 aa17.16■□□□□ 0.34
FBXO38-214ENST00000509273 MYCNP04198 464 aaPredicted RBP17.14■□□□□ 0.33
FBXO38-214ENST00000509273 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.13■□□□□ 0.33
FBXO38-214ENST00000509273 HNRNPUL2Q1KMD3 747 aaKnown RBP17.13■□□□□ 0.33
FBXO38-214ENST00000509273 SAMD1Q6SPF0 538 aaPredicted RBP17.04■□□□□ 0.32
FBXO38-214ENST00000509273 APLP2Q06481 763 aa17.02■□□□□ 0.32
FBXO38-214ENST00000509273 CSRNP3Q8WYN3 585 aa16.99■□□□□ 0.31
FBXO38-214ENST00000509273 CAPN15O75808 1086 aa16.87■□□□□ 0.29
FBXO38-214ENST00000509273 SPINK5Q9NQ38 1064 aaPredicted RBP16.85■□□□□ 0.29
FBXO38-214ENST00000509273 TRHP20396 242 aaPredicted RBP16.75■□□□□ 0.27
FBXO38-214ENST00000509273 ZNF219Q9P2Y4 722 aaPredicted RBP16.74■□□□□ 0.27
FBXO38-214ENST00000509273 ATXN8OSP0DMR3 200 aa16.73■□□□□ 0.27
FBXO38-214ENST00000509273 POTEHQ6S545 545 aa16.72■□□□□ 0.27
FBXO38-214ENST00000509273 ATF5Q9Y2D1 282 aaPredicted RBP16.62■□□□□ 0.25
FBXO38-214ENST00000509273 DSG3P32926 999 aa16.54■□□□□ 0.24
FBXO38-214ENST00000509273 ABCB7O75027 752 aa16.5■□□□□ 0.23
FBXO38-214ENST00000509273 POLA2Q14181 598 aa16.43■□□□□ 0.22
FBXO38-214ENST00000509273 SLC24A1O60721 1099 aa16.32■□□□□ 0.2
FBXO38-214ENST00000509273 ZBTB12Q9Y330 459 aaPredicted RBP16.2■□□□□ 0.18
FBXO38-214ENST00000509273 FBLN2P98095 1184 aa16.08■□□□□ 0.16
FBXO38-214ENST00000509273 MKRN4PQ13434 485 aaPredicted RBP15.89■□□□□ 0.13
FBXO38-214ENST00000509273 RBM42Q9BTD8 480 aaKnown RBP15.85■□□□□ 0.13
FBXO38-214ENST00000509273 OSCARQ8IYS5 282 aa15.84■□□□□ 0.13
FBXO38-214ENST00000509273 SPDYE2BA6NHP3 402 aa15.7■□□□□ 0.1
FBXO38-214ENST00000509273 SPDYE6P0CI01 402 aa15.7■□□□□ 0.1
FBXO38-214ENST00000509273 SPDYE2Q495Y8 402 aa15.7■□□□□ 0.1
FBXO38-214ENST00000509273 ZNF692Q9BU19 519 aaPredicted RBP15.65■□□□□ 0.1
FBXO38-214ENST00000509273 AKT1S1Q96B36 256 aa15.59■□□□□ 0.09
FBXO38-214ENST00000509273 SPDYE4A6NLX3 237 aa15.57■□□□□ 0.08
FBXO38-214ENST00000509273 RTN4Q9NQC3 1192 aaKnown RBP15.53■□□□□ 0.08
FBXO38-214ENST00000509273 AMER1Q5JTC6 1135 aaPredicted RBP15.5■□□□□ 0.07
FBXO38-214ENST00000509273 SSUH2Q9Y2M2 353 aa15.5■□□□□ 0.07
FBXO38-214ENST00000509273 FKBP8Q14318 412 aa15.44■□□□□ 0.06
FBXO38-214ENST00000509273 REM2Q8IYK8 340 aaPredicted RBP15.43■□□□□ 0.06
FBXO38-214ENST00000509273 PABPN1Q86U42 306 aaKnown RBP eCLIP15.41■□□□□ 0.06
FBXO38-214ENST00000509273 SPDYE1Q8NFV5 336 aaPredicted RBP15.3■□□□□ 0.04
FBXO38-214ENST00000509273 CLEC11AQ9Y240 323 aa15.25■□□□□ 0.03
FBXO38-214ENST00000509273 PITPNM1O00562 1244 aa15.23■□□□□ 0.03
FBXO38-214ENST00000509273 CHRDL2Q6WN34 429 aa15.21■□□□□ 0.03
FBXO38-214ENST00000509273 PROM2Q8N271 834 aa15.18■□□□□ 0.02
FBXO38-214ENST00000509273 STAG3Q9UJ98 1225 aa15.18■□□□□ 0.02
FBXO38-214ENST00000509273 SP7Q8TDD2 431 aaPredicted RBP15.14■□□□□ 0.01
FBXO38-214ENST00000509273 PRR29P0C7W0 189 aa15.1■□□□□ 0.01
FBXO38-214ENST00000509273 FBXO3Q9UK99 471 aa15□□□□□ -0.01
FBXO38-214ENST00000509273 FXR2P51116 673 aaKnown RBP eCLIP14.96□□□□□ -0.01
FBXO38-214ENST00000509273 PIP4P2Q8N4L2 257 aa14.96□□□□□ -0.01
FBXO38-214ENST00000509273 PRKAR2AP13861 404 aaKnown RBP14.89□□□□□ -0.03
FBXO38-214ENST00000509273 MIER1Q8N108 512 aa14.84□□□□□ -0.03
FBXO38-214ENST00000509273 PLEKHG5O94827 1062 aa14.83□□□□□ -0.04
FBXO38-214ENST00000509273 CHADLQ6NUI6 762 aa14.83□□□□□ -0.04
FBXO38-214ENST00000509273 PLCD3Q8N3E9 789 aa14.8□□□□□ -0.04
FBXO38-214ENST00000509273 CREBZFQ9NS37 354 aa14.78□□□□□ -0.04
FBXO38-214ENST00000509273 VASPP50552 380 aaPredicted RBP14.72□□□□□ -0.05
FBXO38-214ENST00000509273 FARP1Q9Y4F1 1045 aaPredicted RBP14.7□□□□□ -0.06
FBXO38-214ENST00000509273 ZBTB47Q9UFB7 747 aaPredicted RBP14.65□□□□□ -0.06
FBXO38-214ENST00000509273 NPM1P06748 294 aaKnown RBP eCLIP14.64□□□□□ -0.07
FBXO38-214ENST00000509273 HAX1O00165 279 aa14.6□□□□□ -0.07
FBXO38-214ENST00000509273 KLHL34Q8N239 644 aa14.6□□□□□ -0.07
FBXO38-214ENST00000509273 MNX1P50219 401 aaPredicted RBP14.56□□□□□ -0.08
FBXO38-214ENST00000509273 IFNLR1Q8IU57 520 aaPredicted RBP14.47□□□□□ -0.09
FBXO38-214ENST00000509273 C19orf67A6NJJ6 358 aa14.46□□□□□ -0.09
FBXO38-214ENST00000509273 CD44P16070 742 aaKnown RBP14.46□□□□□ -0.09
FBXO38-214ENST00000509273 PAK3O75914 559 aaPredicted RBP14.45□□□□□ -0.1
FBXO38-214ENST00000509273 SPOCK2Q92563 424 aa14.4□□□□□ -0.1
FBXO38-214ENST00000509273 ZRANB1Q9UGI0 708 aa14.37□□□□□ -0.11
FBXO38-214ENST00000509273 TSPYL2Q9H2G4 693 aaPredicted RBP14.36□□□□□ -0.11
FBXO38-214ENST00000509273 NUBP1P53384 320 aa14.35□□□□□ -0.11
FBXO38-214ENST00000509273 RASEFQ8IZ41 740 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms