RNA–Protein interactions for RNA: ENST00000509228.1

CTD-2350J17.1-201, humanhuman

TSL 2 BASIC

Gene CTD-2350J17.1, Length 362 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTD-2350J17.1-201ENST00000509228 AEBP2Q6ZN18 517 aaPredicted RBP23.22■■□□□ 1.31
CTD-2350J17.1-201ENST00000509228 CHIC1Q5VXU3 224 aa22.7■■□□□ 1.22
CTD-2350J17.1-201ENST00000509228 SENP3Q9H4L4 574 aaPredicted RBP19.87■□□□□ 0.77
CTD-2350J17.1-201ENST00000509228 PHF23Q9BUL5 403 aaPredicted RBP19.85■□□□□ 0.77
CTD-2350J17.1-201ENST00000509228 PLPPR3Q6T4P5 718 aa18.44■□□□□ 0.54
CTD-2350J17.1-201ENST00000509228 FOXD1Q16676 465 aa18.35■□□□□ 0.53
CTD-2350J17.1-201ENST00000509228 PPP6R1Q9UPN7 881 aa17.52■□□□□ 0.4
CTD-2350J17.1-201ENST00000509228 ADRA2BP18089 450 aa17.51■□□□□ 0.39
CTD-2350J17.1-201ENST00000509228 PIAS4Q8N2W9 510 aaPredicted RBP17.33■□□□□ 0.36
CTD-2350J17.1-201ENST00000509228 MSH5O43196 834 aa17.09■□□□□ 0.33
CTD-2350J17.1-201ENST00000509228 SCAF1Q9H7N4 1312 aaKnown RBP16.21■□□□□ 0.19
CTD-2350J17.1-201ENST00000509228 PPP4R3CPQ6ZMV5 832 aa16.17■□□□□ 0.18
CTD-2350J17.1-201ENST00000509228 MAPK8IP2Q13387 824 aaPredicted RBP15.89■□□□□ 0.13
CTD-2350J17.1-201ENST00000509228 NCBP3Q53F19 620 aaKnown RBP15.82■□□□□ 0.12
CTD-2350J17.1-201ENST00000509228 DMRT2Q9Y5R5 561 aa15.82■□□□□ 0.12
CTD-2350J17.1-201ENST00000509228 CNKSR2Q8WXI2 1034 aa15.8■□□□□ 0.12
CTD-2350J17.1-201ENST00000509228 KCNA4P22459 653 aa15.64■□□□□ 0.09
CTD-2350J17.1-201ENST00000509228 POTEDQ86YR6 584 aa15.61■□□□□ 0.09
CTD-2350J17.1-201ENST00000509228 RNF216Q9NWF9 866 aaPredicted RBP15.52■□□□□ 0.08
CTD-2350J17.1-201ENST00000509228 NPM3O75607 178 aaKnown RBP15.48■□□□□ 0.07
CTD-2350J17.1-201ENST00000509228 HOXD11P31277 338 aaPredicted RBP15.46■□□□□ 0.07
CTD-2350J17.1-201ENST00000509228 DNAJC5BQ9UF47 199 aa15.19■□□□□ 0.02
CTD-2350J17.1-201ENST00000509228 DCAF8L1A6NGE4 600 aa15.08■□□□□ 0
CTD-2350J17.1-201ENST00000509228 SLC4A1APQ9BWU0 796 aaKnown RBP14.94□□□□□ -0.02
CTD-2350J17.1-201ENST00000509228 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.72□□□□□ -0.05
CTD-2350J17.1-201ENST00000509228 SLC4A2P04920 1241 aa14.6□□□□□ -0.07
CTD-2350J17.1-201ENST00000509228 RNF39Q9H2S5 420 aa14.57□□□□□ -0.08
CTD-2350J17.1-201ENST00000509228 FOXD4L1Q9NU39 408 aa14.51□□□□□ -0.09
CTD-2350J17.1-201ENST00000509228 C1QBPQ07021 282 aaKnown RBP14.45□□□□□ -0.1
CTD-2350J17.1-201ENST00000509228 U3KPZ7 1027 aaPredicted RBP14.43□□□□□ -0.1
CTD-2350J17.1-201ENST00000509228 MYCNP04198 464 aaPredicted RBP14.39□□□□□ -0.11
CTD-2350J17.1-201ENST00000509228 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.38□□□□□ -0.11
CTD-2350J17.1-201ENST00000509228 HNRNPUL2Q1KMD3 747 aaKnown RBP14.38□□□□□ -0.11
CTD-2350J17.1-201ENST00000509228 ZBTB22O15209 634 aa14.35□□□□□ -0.11
CTD-2350J17.1-201ENST00000509228 EHMT2Q96KQ7 1210 aa14.33□□□□□ -0.12
CTD-2350J17.1-201ENST00000509228 APLP2Q06481 763 aa14.29□□□□□ -0.12
CTD-2350J17.1-201ENST00000509228 SAMD1Q6SPF0 538 aaPredicted RBP14.28□□□□□ -0.12
CTD-2350J17.1-201ENST00000509228 CACNB1Q02641 598 aaPredicted RBP14.25□□□□□ -0.13
CTD-2350J17.1-201ENST00000509228 CSRNP3Q8WYN3 585 aa14.23□□□□□ -0.13
CTD-2350J17.1-201ENST00000509228 ATXN8OSP0DMR3 200 aa14.08□□□□□ -0.16
CTD-2350J17.1-201ENST00000509228 CAPN15O75808 1086 aa14.02□□□□□ -0.17
CTD-2350J17.1-201ENST00000509228 ZNF219Q9P2Y4 722 aaPredicted RBP14.02□□□□□ -0.17
CTD-2350J17.1-201ENST00000509228 SPINK5Q9NQ38 1064 aaPredicted RBP14.01□□□□□ -0.17
CTD-2350J17.1-201ENST00000509228 TRHP20396 242 aaPredicted RBP13.91□□□□□ -0.18
CTD-2350J17.1-201ENST00000509228 ATF5Q9Y2D1 282 aaPredicted RBP13.85□□□□□ -0.19
CTD-2350J17.1-201ENST00000509228 DSG3P32926 999 aa13.81□□□□□ -0.2
CTD-2350J17.1-201ENST00000509228 ABCB7O75027 752 aa13.69□□□□□ -0.22
CTD-2350J17.1-201ENST00000509228 POLA2Q14181 598 aa13.68□□□□□ -0.22
CTD-2350J17.1-201ENST00000509228 ZBTB12Q9Y330 459 aaPredicted RBP13.59□□□□□ -0.23
CTD-2350J17.1-201ENST00000509228 FBLN2P98095 1184 aa13.44□□□□□ -0.26
CTD-2350J17.1-201ENST00000509228 MKRN4PQ13434 485 aaPredicted RBP13.28□□□□□ -0.28
CTD-2350J17.1-201ENST00000509228 RBM42Q9BTD8 480 aaKnown RBP13.28□□□□□ -0.28
CTD-2350J17.1-201ENST00000509228 OSCARQ8IYS5 282 aa13.21□□□□□ -0.29
CTD-2350J17.1-201ENST00000509228 SPDYE2BA6NHP3 402 aa13.16□□□□□ -0.3
CTD-2350J17.1-201ENST00000509228 SPDYE6P0CI01 402 aa13.16□□□□□ -0.3
CTD-2350J17.1-201ENST00000509228 SPDYE2Q495Y8 402 aa13.16□□□□□ -0.3
CTD-2350J17.1-201ENST00000509228 ZNF692Q9BU19 519 aaPredicted RBP13.05□□□□□ -0.32
CTD-2350J17.1-201ENST00000509228 AKT1S1Q96B36 256 aa13.04□□□□□ -0.32
CTD-2350J17.1-201ENST00000509228 SSUH2Q9Y2M2 353 aa13.01□□□□□ -0.33
CTD-2350J17.1-201ENST00000509228 SPDYE4A6NLX3 237 aa13□□□□□ -0.33
CTD-2350J17.1-201ENST00000509228 FKBP8Q14318 412 aa12.89□□□□□ -0.35
CTD-2350J17.1-201ENST00000509228 REM2Q8IYK8 340 aaPredicted RBP12.86□□□□□ -0.35
CTD-2350J17.1-201ENST00000509228 PABPN1Q86U42 306 aaKnown RBP eCLIP12.84□□□□□ -0.35
CTD-2350J17.1-201ENST00000509228 PROM2Q8N271 834 aa12.8□□□□□ -0.36
CTD-2350J17.1-201ENST00000509228 SPDYE1Q8NFV5 336 aaPredicted RBP12.79□□□□□ -0.36
CTD-2350J17.1-201ENST00000509228 STAG3Q9UJ98 1225 aa12.73□□□□□ -0.37
CTD-2350J17.1-201ENST00000509228 PITPNM1O00562 1244 aa12.7□□□□□ -0.38
CTD-2350J17.1-201ENST00000509228 CHRDL2Q6WN34 429 aa12.68□□□□□ -0.38
CTD-2350J17.1-201ENST00000509228 CLEC11AQ9Y240 323 aa12.66□□□□□ -0.38
CTD-2350J17.1-201ENST00000509228 FBXO3Q9UK99 471 aa12.59□□□□□ -0.39
CTD-2350J17.1-201ENST00000509228 PRR29P0C7W0 189 aa12.58□□□□□ -0.4
CTD-2350J17.1-201ENST00000509228 FXR2P51116 673 aaKnown RBP eCLIP12.51□□□□□ -0.41
CTD-2350J17.1-201ENST00000509228 PIP4P2Q8N4L2 257 aa12.47□□□□□ -0.41
CTD-2350J17.1-201ENST00000509228 PLEKHG5O94827 1062 aa12.41□□□□□ -0.42
CTD-2350J17.1-201ENST00000509228 PRKAR2AP13861 404 aaKnown RBP12.39□□□□□ -0.43
CTD-2350J17.1-201ENST00000509228 POTEHQ6S545 545 aa12.38□□□□□ -0.43
CTD-2350J17.1-201ENST00000509228 CREBZFQ9NS37 354 aa12.35□□□□□ -0.43
CTD-2350J17.1-201ENST00000509228 VASPP50552 380 aaPredicted RBP12.33□□□□□ -0.44
CTD-2350J17.1-201ENST00000509228 MIER1Q8N108 512 aa12.33□□□□□ -0.44
CTD-2350J17.1-201ENST00000509228 PLCD3Q8N3E9 789 aa12.33□□□□□ -0.44
CTD-2350J17.1-201ENST00000509228 CHADLQ6NUI6 762 aa12.31□□□□□ -0.44
CTD-2350J17.1-201ENST00000509228 ZBTB47Q9UFB7 747 aaPredicted RBP12.31□□□□□ -0.44
CTD-2350J17.1-201ENST00000509228 FARP1Q9Y4F1 1045 aaPredicted RBP12.26□□□□□ -0.45
CTD-2350J17.1-201ENST00000509228 NPM1P06748 294 aaKnown RBP eCLIP12.24□□□□□ -0.45
CTD-2350J17.1-201ENST00000509228 MNX1P50219 401 aaPredicted RBP12.21□□□□□ -0.45
CTD-2350J17.1-201ENST00000509228 KLHL34Q8N239 644 aa12.14□□□□□ -0.47
CTD-2350J17.1-201ENST00000509228 IFNLR1Q8IU57 520 aaPredicted RBP12.11□□□□□ -0.47
CTD-2350J17.1-201ENST00000509228 HAX1O00165 279 aa12.1□□□□□ -0.47
CTD-2350J17.1-201ENST00000509228 C19orf67A6NJJ6 358 aa12.08□□□□□ -0.48
CTD-2350J17.1-201ENST00000509228 PAK3O75914 559 aaPredicted RBP12.07□□□□□ -0.48
CTD-2350J17.1-201ENST00000509228 CD44P16070 742 aaKnown RBP12.05□□□□□ -0.48
CTD-2350J17.1-201ENST00000509228 SPOCK2Q92563 424 aa12.05□□□□□ -0.48
CTD-2350J17.1-201ENST00000509228 NUBP1P53384 320 aa12.01□□□□□ -0.49
CTD-2350J17.1-201ENST00000509228 FAM212AQ96EL1 285 aa12□□□□□ -0.49
CTD-2350J17.1-201ENST00000509228 RASEFQ8IZ41 740 aa11.96□□□□□ -0.49
CTD-2350J17.1-201ENST00000509228 CLCN6P51797 869 aa11.95□□□□□ -0.5
CTD-2350J17.1-201ENST00000509228 GSE1Q14687 1217 aa11.95□□□□□ -0.5
CTD-2350J17.1-201ENST00000509228 ZRANB1Q9UGI0 708 aa11.95□□□□□ -0.5
CTD-2350J17.1-201ENST00000509228 ZNF579Q8NAF0 562 aaKnown RBP11.92□□□□□ -0.5
CTD-2350J17.1-201ENST00000509228 TSPYL2Q9H2G4 693 aaPredicted RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms