RNA–Protein interactions for RNA: ENST00000508591.5

HELQ-203, Transcript of helicase, POLQ like, humanhuman

TSL 1 (best)

Gene HELQ, Length 3,429 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HELQ-203ENST00000508591 NISCHQ9Y2I1 1504 aa17.82■□□□□ 0.44
HELQ-203ENST00000508591 SHROOM4Q9ULL8 1493 aa16.58■□□□□ 0.24
HELQ-203ENST00000508591 SUPT5HO00267 1087 aaKnown RBP16.4■□□□□ 0.22
HELQ-203ENST00000508591 DCAF8L2P0C7V8 631 aa16.21■□□□□ 0.19
HELQ-203ENST00000508591 PCGF6Q9BYE7 350 aa15.73■□□□□ 0.11
HELQ-203ENST00000508591 EHMT2Q96KQ7 1210 aa15.66■□□□□ 0.1
HELQ-203ENST00000508591 PPARGC1BQ86YN6 1023 aaKnown RBP15.64■□□□□ 0.09
HELQ-203ENST00000508591 LOC105371045A0A1W2PR82 267 aa15.5■□□□□ 0.07
HELQ-203ENST00000508591 CHIC1Q5VXU3 224 aa15.49■□□□□ 0.07
HELQ-203ENST00000508591 MYO15BQ96JP2 1530 aa15.43■□□□□ 0.06
HELQ-203ENST00000508591 HRCP23327 699 aa15.4■□□□□ 0.06
HELQ-203ENST00000508591 FAM9AQ8IZU1 332 aaPredicted RBP15.35■□□□□ 0.05
HELQ-203ENST00000508591 TTBK1Q5TCY1 1321 aaPredicted RBP15.12■□□□□ 0.01
HELQ-203ENST00000508591 ZCCHC6Q5VYS8 1495 aaKnown RBP15□□□□□ -0.01
HELQ-203ENST00000508591 TRIM41Q8WV44 630 aa14.92□□□□□ -0.02
HELQ-203ENST00000508591 TRIM26Q12899 539 aaPredicted RBP14.87□□□□□ -0.03
HELQ-203ENST00000508591 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.72□□□□□ -0.05
HELQ-203ENST00000508591 CCER1Q8TC90 406 aaPredicted RBP14.61□□□□□ -0.07
HELQ-203ENST00000508591 RANGAP1P46060 587 aaPredicted RBP14.6□□□□□ -0.07
HELQ-203ENST00000508591 DCAF1Q9Y4B6 1507 aa14.58□□□□□ -0.08
HELQ-203ENST00000508591 SCAF1Q9H7N4 1312 aaKnown RBP14.56□□□□□ -0.08
HELQ-203ENST00000508591 YTHDC1Q96MU7 727 aaKnown RBP14.52□□□□□ -0.09
HELQ-203ENST00000508591 SCRIBQ14160 1630 aa14.51□□□□□ -0.09
HELQ-203ENST00000508591 CCDC180Q9P1Z9 1646 aa14.5□□□□□ -0.09
HELQ-203ENST00000508591 ZEB1P37275 1124 aaPredicted RBP14.43□□□□□ -0.1
HELQ-203ENST00000508591 RSF1Q96T23 1441 aaPredicted RBP14.41□□□□□ -0.1
HELQ-203ENST00000508591 ABCC9O60706 1549 aa14.41□□□□□ -0.1
HELQ-203ENST00000508591 UBTFP17480 764 aaKnown RBP14.36□□□□□ -0.11
HELQ-203ENST00000508591 NEUROD1Q13562 356 aa14.36□□□□□ -0.11
HELQ-203ENST00000508591 RB1CC1Q8TDY2 1594 aa14.35□□□□□ -0.11
HELQ-203ENST00000508591 HNRNPUL2Q1KMD3 747 aaKnown RBP14.32□□□□□ -0.12
HELQ-203ENST00000508591 GTF3C3Q9Y5Q9 886 aa14.31□□□□□ -0.12
HELQ-203ENST00000508591 DIEXFQ68CQ4 756 aaKnown RBP14.29□□□□□ -0.12
HELQ-203ENST00000508591 CECR2Q9BXF3 1484 aa14.29□□□□□ -0.12
HELQ-203ENST00000508591 PABPN1Q86U42 306 aaKnown RBP eCLIP14.19□□□□□ -0.14
HELQ-203ENST00000508591 ACIN1Q9UKV3 1341 aaKnown RBP14.19□□□□□ -0.14
HELQ-203ENST00000508591 CENPBP07199 599 aaPredicted RBP14.12□□□□□ -0.15
HELQ-203ENST00000508591 MROH2BQ7Z745 1585 aa14.1□□□□□ -0.15
HELQ-203ENST00000508591 ITGAEP38570 1179 aa14.06□□□□□ -0.16
HELQ-203ENST00000508591 ABCC8Q09428 1581 aa14.04□□□□□ -0.16
HELQ-203ENST00000508591 PELP1Q8IZL8 1130 aaKnown RBP14.03□□□□□ -0.16
HELQ-203ENST00000508591 WIZO95785 1651 aa14.02□□□□□ -0.16
HELQ-203ENST00000508591 SOGA1O94964 1423 aa14.01□□□□□ -0.17
HELQ-203ENST00000508591 MIER1Q8N108 512 aa14.01□□□□□ -0.17
HELQ-203ENST00000508591 APLP2Q06481 763 aa14□□□□□ -0.17
HELQ-203ENST00000508591 CCDC88BA6NC98 1476 aa13.98□□□□□ -0.17
HELQ-203ENST00000508591 CSRNP3Q8WYN3 585 aa13.96□□□□□ -0.17
HELQ-203ENST00000508591 ZNF316A6NFI3 1004 aaPredicted RBP13.95□□□□□ -0.18
HELQ-203ENST00000508591 RUSC2Q8N2Y8 1516 aa13.95□□□□□ -0.18
HELQ-203ENST00000508591 CEP162Q5TB80 1403 aa13.94□□□□□ -0.18
HELQ-203ENST00000508591 ATP1B4Q9UN42 357 aaPredicted RBP13.85□□□□□ -0.19
HELQ-203ENST00000508591 BCANQ96GW7 911 aa13.83□□□□□ -0.19
HELQ-203ENST00000508591 HIRIP3Q9BW71 556 aaPredicted RBP13.76□□□□□ -0.21
HELQ-203ENST00000508591 KCNH8Q96L42 1107 aa13.7□□□□□ -0.22
HELQ-203ENST00000508591 P3H3Q8IVL6 736 aa13.68□□□□□ -0.22
HELQ-203ENST00000508591 TNIKQ9UKE5 1360 aa13.68□□□□□ -0.22
HELQ-203ENST00000508591 CLIP1P30622 1438 aa13.66□□□□□ -0.22
HELQ-203ENST00000508591 KANK4Q5T7N3 995 aaPredicted RBP13.66□□□□□ -0.22
HELQ-203ENST00000508591 CNGB1Q14028 1251 aaPredicted RBP13.62□□□□□ -0.23
HELQ-203ENST00000508591 WRNQ14191 1432 aaPredicted RBP eCLIP13.62□□□□□ -0.23
HELQ-203ENST00000508591 NACADO15069 1562 aa13.61□□□□□ -0.23
HELQ-203ENST00000508591 BAZ1AQ9NRL2 1556 aaPredicted RBP13.61□□□□□ -0.23
HELQ-203ENST00000508591 FAM50AQ14320 339 aaKnown RBP13.59□□□□□ -0.23
HELQ-203ENST00000508591 GOLGA3Q08378 1498 aa13.59□□□□□ -0.23
HELQ-203ENST00000508591 DDX10Q13206 875 aaKnown RBP13.56□□□□□ -0.24
HELQ-203ENST00000508591 RAPGEF2Q9Y4G8 1499 aa13.55□□□□□ -0.24
HELQ-203ENST00000508591 TRIM52Q96A61 297 aa13.54□□□□□ -0.24
HELQ-203ENST00000508591 SMARCA2P51531 1590 aa13.53□□□□□ -0.24
HELQ-203ENST00000508591 SIN3AQ96ST3 1273 aa13.52□□□□□ -0.24
HELQ-203ENST00000508591 SUPT16HQ9Y5B9 1047 aaKnown RBP13.52□□□□□ -0.25
HELQ-203ENST00000508591 TOP2AP11388 1531 aaKnown RBP13.5□□□□□ -0.25
HELQ-203ENST00000508591 SENP3-EIF4A1A0A087X0R7 540 aa13.48□□□□□ -0.25
HELQ-203ENST00000508591 SMARCA4P51532 1647 aa13.48□□□□□ -0.25
HELQ-203ENST00000508591 FKBP8Q14318 412 aa13.47□□□□□ -0.25
HELQ-203ENST00000508591 ARID3CA6NKF2 412 aa13.46□□□□□ -0.25
HELQ-203ENST00000508591 IRX6P78412 446 aaPredicted RBP13.46□□□□□ -0.25
HELQ-203ENST00000508591 CEP164Q9UPV0 1460 aa13.43□□□□□ -0.26
HELQ-203ENST00000508591 VPS8Q8N3P4 1428 aa13.43□□□□□ -0.26
HELQ-203ENST00000508591 EIF4G1Q04637 1599 aaKnown RBP13.41□□□□□ -0.26
HELQ-203ENST00000508591 SYNJ1O43426 1573 aa13.41□□□□□ -0.26
HELQ-203ENST00000508591 DHX57Q6P158 1386 aaKnown RBP13.4□□□□□ -0.26
HELQ-203ENST00000508591 EEA1Q15075 1411 aa13.38□□□□□ -0.27
HELQ-203ENST00000508591 TSHZ2Q9NRE2 1034 aa13.35□□□□□ -0.27
HELQ-203ENST00000508591 BAZ1BQ9UIG0 1483 aaKnown RBP13.33□□□□□ -0.27
HELQ-203ENST00000508591 POLR3GLQ9BT43 218 aa13.32□□□□□ -0.28
HELQ-203ENST00000508591 NEFLP07196 543 aa13.32□□□□□ -0.28
HELQ-203ENST00000508591 KIF21BO75037 1637 aa13.3□□□□□ -0.28
HELQ-203ENST00000508591 CHIC2Q9UKJ5 165 aa13.28□□□□□ -0.28
HELQ-203ENST00000508591 RAB3GAP2Q9H2M9 1393 aa13.27□□□□□ -0.28
HELQ-203ENST00000508591 CCNB3Q8WWL7 1395 aa13.26□□□□□ -0.29
HELQ-203ENST00000508591 ARAP1Q96P48 1450 aa13.26□□□□□ -0.29
HELQ-203ENST00000508591 ATAD2BQ9ULI0 1458 aa13.24□□□□□ -0.29
HELQ-203ENST00000508591 ANP32CO43423 234 aa13.22□□□□□ -0.29
HELQ-203ENST00000508591 HNRNPUQ00839 825 aaKnown RBP eCLIP13.22□□□□□ -0.29
HELQ-203ENST00000508591 MYT1Q01538 1121 aa13.22□□□□□ -0.29
HELQ-203ENST00000508591 UNC13AQ9UPW8 1703 aa13.2□□□□□ -0.3
HELQ-203ENST00000508591 RRP7BPQ9NSQ0 103 aa13.18□□□□□ -0.3
HELQ-203ENST00000508591 FOXD1Q16676 465 aa13.18□□□□□ -0.3
HELQ-203ENST00000508591 ZNF326Q5BKZ1 582 aaKnown RBP13.16□□□□□ -0.3
HELQ-203ENST00000508591 FAM9BQ8IZU0 186 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 183.5 ms