RNA–Protein interactions for RNA: ENST00000508083.1

LINC01333-201, Transcript of long intergenic non-protein coding RNA 1333, humanhuman

TSL 1 (best) BASIC

Gene LINC01333, Length 724 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01333-201ENST00000508083 AEBP2Q6ZN18 517 aaPredicted RBP19.43■□□□□ 0.7
LINC01333-201ENST00000508083 CHIC1Q5VXU3 224 aa18.85■□□□□ 0.61
LINC01333-201ENST00000508083 SENP3Q9H4L4 574 aaPredicted RBP16.58■□□□□ 0.24
LINC01333-201ENST00000508083 PHF23Q9BUL5 403 aaPredicted RBP16.52■□□□□ 0.24
LINC01333-201ENST00000508083 FOXD1Q16676 465 aa15.37■□□□□ 0.05
LINC01333-201ENST00000508083 PLPPR3Q6T4P5 718 aa15.23■□□□□ 0.03
LINC01333-201ENST00000508083 PPP6R1Q9UPN7 881 aa14.63□□□□□ -0.07
LINC01333-201ENST00000508083 ADRA2BP18089 450 aa14.59□□□□□ -0.07
LINC01333-201ENST00000508083 MSH5O43196 834 aa14.47□□□□□ -0.09
LINC01333-201ENST00000508083 PIAS4Q8N2W9 510 aaPredicted RBP14.43□□□□□ -0.1
LINC01333-201ENST00000508083 POTEDQ86YR6 584 aa14.14□□□□□ -0.15
LINC01333-201ENST00000508083 SCAF1Q9H7N4 1312 aaKnown RBP13.44□□□□□ -0.26
LINC01333-201ENST00000508083 PPP4R3CPQ6ZMV5 832 aa13.37□□□□□ -0.27
LINC01333-201ENST00000508083 MAPK8IP2Q13387 824 aaPredicted RBP13.29□□□□□ -0.28
LINC01333-201ENST00000508083 DMRT2Q9Y5R5 561 aa13.2□□□□□ -0.3
LINC01333-201ENST00000508083 CNKSR2Q8WXI2 1034 aa13.07□□□□□ -0.32
LINC01333-201ENST00000508083 NCBP3Q53F19 620 aaKnown RBP13□□□□□ -0.33
LINC01333-201ENST00000508083 HOXD11P31277 338 aaPredicted RBP12.87□□□□□ -0.35
LINC01333-201ENST00000508083 RNF216Q9NWF9 866 aaPredicted RBP12.86□□□□□ -0.35
LINC01333-201ENST00000508083 KCNA4P22459 653 aa12.8□□□□□ -0.36
LINC01333-201ENST00000508083 NPM3O75607 178 aaKnown RBP12.76□□□□□ -0.37
LINC01333-201ENST00000508083 DCAF8L1A6NGE4 600 aa12.65□□□□□ -0.38
LINC01333-201ENST00000508083 DNAJC5BQ9UF47 199 aa12.56□□□□□ -0.4
LINC01333-201ENST00000508083 CACNB1Q02641 598 aaPredicted RBP12.45□□□□□ -0.42
LINC01333-201ENST00000508083 RNF39Q9H2S5 420 aa12.28□□□□□ -0.44
LINC01333-201ENST00000508083 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.22□□□□□ -0.45
LINC01333-201ENST00000508083 SLC4A1APQ9BWU0 796 aaKnown RBP12.18□□□□□ -0.46
LINC01333-201ENST00000508083 C1QBPQ07021 282 aaKnown RBP12.13□□□□□ -0.47
LINC01333-201ENST00000508083 SLC4A2P04920 1241 aa12.1□□□□□ -0.47
LINC01333-201ENST00000508083 U3KPZ7 1027 aaPredicted RBP11.99□□□□□ -0.49
LINC01333-201ENST00000508083 FOXD4L1Q9NU39 408 aa11.88□□□□□ -0.51
LINC01333-201ENST00000508083 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.85□□□□□ -0.51
LINC01333-201ENST00000508083 HNRNPUL2Q1KMD3 747 aaKnown RBP11.85□□□□□ -0.51
LINC01333-201ENST00000508083 MYCNP04198 464 aaPredicted RBP11.82□□□□□ -0.52
LINC01333-201ENST00000508083 SAMD1Q6SPF0 538 aaPredicted RBP11.78□□□□□ -0.52
LINC01333-201ENST00000508083 ZBTB22O15209 634 aa11.77□□□□□ -0.53
LINC01333-201ENST00000508083 APLP2Q06481 763 aa11.77□□□□□ -0.53
LINC01333-201ENST00000508083 SPINK5Q9NQ38 1064 aaPredicted RBP11.69□□□□□ -0.54
LINC01333-201ENST00000508083 CAPN15O75808 1086 aa11.66□□□□□ -0.54
LINC01333-201ENST00000508083 ZNF219Q9P2Y4 722 aaPredicted RBP11.61□□□□□ -0.55
LINC01333-201ENST00000508083 CSRNP3Q8WYN3 585 aa11.57□□□□□ -0.56
LINC01333-201ENST00000508083 ATXN8OSP0DMR3 200 aa11.55□□□□□ -0.56
LINC01333-201ENST00000508083 DSG3P32926 999 aa11.55□□□□□ -0.56
LINC01333-201ENST00000508083 TRHP20396 242 aaPredicted RBP11.54□□□□□ -0.56
LINC01333-201ENST00000508083 EHMT2Q96KQ7 1210 aa11.53□□□□□ -0.56
LINC01333-201ENST00000508083 ATF5Q9Y2D1 282 aaPredicted RBP11.46□□□□□ -0.57
LINC01333-201ENST00000508083 ABCB7O75027 752 aa11.39□□□□□ -0.59
LINC01333-201ENST00000508083 POLA2Q14181 598 aa11.34□□□□□ -0.59
LINC01333-201ENST00000508083 ZBTB12Q9Y330 459 aaPredicted RBP11.21□□□□□ -0.61
LINC01333-201ENST00000508083 POTEHQ6S545 545 aa11.1□□□□□ -0.63
LINC01333-201ENST00000508083 RBM42Q9BTD8 480 aaKnown RBP11.06□□□□□ -0.64
LINC01333-201ENST00000508083 FBLN2P98095 1184 aa11.05□□□□□ -0.64
LINC01333-201ENST00000508083 MKRN4PQ13434 485 aaPredicted RBP10.97□□□□□ -0.65
LINC01333-201ENST00000508083 OSCARQ8IYS5 282 aa10.94□□□□□ -0.66
LINC01333-201ENST00000508083 SPDYE2BA6NHP3 402 aa10.88□□□□□ -0.67
LINC01333-201ENST00000508083 SPDYE6P0CI01 402 aa10.88□□□□□ -0.67
LINC01333-201ENST00000508083 SPDYE2Q495Y8 402 aa10.88□□□□□ -0.67
LINC01333-201ENST00000508083 AKT1S1Q96B36 256 aa10.87□□□□□ -0.67
LINC01333-201ENST00000508083 CHRDL2Q6WN34 429 aa10.79□□□□□ -0.68
LINC01333-201ENST00000508083 ZNF692Q9BU19 519 aaPredicted RBP10.77□□□□□ -0.69
LINC01333-201ENST00000508083 SSUH2Q9Y2M2 353 aa10.76□□□□□ -0.69
LINC01333-201ENST00000508083 REM2Q8IYK8 340 aaPredicted RBP10.72□□□□□ -0.69
LINC01333-201ENST00000508083 SPDYE4A6NLX3 237 aa10.64□□□□□ -0.71
LINC01333-201ENST00000508083 PABPN1Q86U42 306 aaKnown RBP eCLIP10.6□□□□□ -0.71
LINC01333-201ENST00000508083 SPDYE1Q8NFV5 336 aaPredicted RBP10.59□□□□□ -0.71
LINC01333-201ENST00000508083 PITPNM1O00562 1244 aa10.58□□□□□ -0.72
LINC01333-201ENST00000508083 PROM2Q8N271 834 aa10.5□□□□□ -0.73
LINC01333-201ENST00000508083 PIP4P2Q8N4L2 257 aa10.49□□□□□ -0.73
LINC01333-201ENST00000508083 CLEC11AQ9Y240 323 aa10.49□□□□□ -0.73
LINC01333-201ENST00000508083 FXR2P51116 673 aaKnown RBP eCLIP10.47□□□□□ -0.73
LINC01333-201ENST00000508083 STAG3Q9UJ98 1225 aa10.47□□□□□ -0.73
LINC01333-201ENST00000508083 FKBP8Q14318 412 aa10.44□□□□□ -0.74
LINC01333-201ENST00000508083 PRR29P0C7W0 189 aa10.41□□□□□ -0.74
LINC01333-201ENST00000508083 SP7Q8TDD2 431 aaPredicted RBP10.39□□□□□ -0.75
LINC01333-201ENST00000508083 HAX1O00165 279 aa10.36□□□□□ -0.75
LINC01333-201ENST00000508083 PRKAR2AP13861 404 aaKnown RBP10.31□□□□□ -0.76
LINC01333-201ENST00000508083 CHADLQ6NUI6 762 aa10.24□□□□□ -0.77
LINC01333-201ENST00000508083 CREBZFQ9NS37 354 aa10.23□□□□□ -0.77
LINC01333-201ENST00000508083 FBXO3Q9UK99 471 aa10.21□□□□□ -0.77
LINC01333-201ENST00000508083 FARP1Q9Y4F1 1045 aaPredicted RBP10.18□□□□□ -0.78
LINC01333-201ENST00000508083 PLEKHG5O94827 1062 aa10.12□□□□□ -0.79
LINC01333-201ENST00000508083 EVX2Q03828 476 aa10.12□□□□□ -0.79
LINC01333-201ENST00000508083 C19orf67A6NJJ6 358 aa10.11□□□□□ -0.79
LINC01333-201ENST00000508083 MNX1P50219 401 aaPredicted RBP10.11□□□□□ -0.79
LINC01333-201ENST00000508083 MIER1Q8N108 512 aa10.11□□□□□ -0.79
LINC01333-201ENST00000508083 NPM1P06748 294 aaKnown RBP eCLIP10.1□□□□□ -0.79
LINC01333-201ENST00000508083 PLCD3Q8N3E9 789 aa10.08□□□□□ -0.8
LINC01333-201ENST00000508083 ZBTB47Q9UFB7 747 aaPredicted RBP10.04□□□□□ -0.8
LINC01333-201ENST00000508083 VASPP50552 380 aaPredicted RBP10.02□□□□□ -0.81
LINC01333-201ENST00000508083 CD44P16070 742 aaKnown RBP10.01□□□□□ -0.81
LINC01333-201ENST00000508083 GABBR2O75899 941 aa9.95□□□□□ -0.82
LINC01333-201ENST00000508083 PAK3O75914 559 aaPredicted RBP9.94□□□□□ -0.82
LINC01333-201ENST00000508083 CLCN6P51797 869 aa9.94□□□□□ -0.82
LINC01333-201ENST00000508083 ZRANB1Q9UGI0 708 aa9.92□□□□□ -0.82
LINC01333-201ENST00000508083 ZNF579Q8NAF0 562 aaKnown RBP9.91□□□□□ -0.82
LINC01333-201ENST00000508083 NUBP1P53384 320 aa9.89□□□□□ -0.83
LINC01333-201ENST00000508083 KLHL34Q8N239 644 aa9.88□□□□□ -0.83
LINC01333-201ENST00000508083 IFNLR1Q8IU57 520 aaPredicted RBP9.87□□□□□ -0.83
LINC01333-201ENST00000508083 RASEFQ8IZ41 740 aa9.86□□□□□ -0.83
LINC01333-201ENST00000508083 TSPYL2Q9H2G4 693 aaPredicted RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms