RNA–Protein interactions for RNA: ENST00000507852.1

SNX2-207, Transcript of sorting nexin 2, humanhuman

TSL 2

Gene SNX2, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-207ENST00000507852 AEBP2Q6ZN18 517 aaPredicted RBP29.79■■■□□ 2.36
SNX2-207ENST00000507852 CHIC1Q5VXU3 224 aa28.45■■■□□ 2.14
SNX2-207ENST00000507852 SENP3Q9H4L4 574 aaPredicted RBP25.53■■□□□ 1.68
SNX2-207ENST00000507852 PHF23Q9BUL5 403 aaPredicted RBP25.16■■□□□ 1.62
SNX2-207ENST00000507852 FOXD1Q16676 465 aa23.7■■□□□ 1.38
SNX2-207ENST00000507852 PLPPR3Q6T4P5 718 aa22.82■■□□□ 1.24
SNX2-207ENST00000507852 MSH5O43196 834 aa22.25■■□□□ 1.15
SNX2-207ENST00000507852 PIAS4Q8N2W9 510 aaPredicted RBP22.21■■□□□ 1.15
SNX2-207ENST00000507852 PPP6R1Q9UPN7 881 aa22.18■■□□□ 1.14
SNX2-207ENST00000507852 ADRA2BP18089 450 aa22.14■■□□□ 1.13
SNX2-207ENST00000507852 POTEDQ86YR6 584 aa21.48■■□□□ 1.03
SNX2-207ENST00000507852 SCAF1Q9H7N4 1312 aaKnown RBP20.41■□□□□ 0.86
SNX2-207ENST00000507852 MAPK8IP2Q13387 824 aaPredicted RBP20.29■□□□□ 0.84
SNX2-207ENST00000507852 DMRT2Q9Y5R5 561 aa20.23■□□□□ 0.83
SNX2-207ENST00000507852 PPP4R3CPQ6ZMV5 832 aa19.97■□□□□ 0.79
SNX2-207ENST00000507852 CNKSR2Q8WXI2 1034 aa19.62■□□□□ 0.73
SNX2-207ENST00000507852 HOXD11P31277 338 aaPredicted RBP19.51■□□□□ 0.71
SNX2-207ENST00000507852 RNF216Q9NWF9 866 aaPredicted RBP19.41■□□□□ 0.7
SNX2-207ENST00000507852 DCAF8L1A6NGE4 600 aa19.4■□□□□ 0.7
SNX2-207ENST00000507852 NCBP3Q53F19 620 aaKnown RBP19.32■□□□□ 0.68
SNX2-207ENST00000507852 CACNB1Q02641 598 aaPredicted RBP19.01■□□□□ 0.63
SNX2-207ENST00000507852 RNF39Q9H2S5 420 aa18.94■□□□□ 0.62
SNX2-207ENST00000507852 NPM3O75607 178 aaKnown RBP18.93■□□□□ 0.62
SNX2-207ENST00000507852 DNAJC5BQ9UF47 199 aa18.89■□□□□ 0.61
SNX2-207ENST00000507852 C1QBPQ07021 282 aaKnown RBP18.72■□□□□ 0.59
SNX2-207ENST00000507852 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.63■□□□□ 0.57
SNX2-207ENST00000507852 KCNA4P22459 653 aa18.62■□□□□ 0.57
SNX2-207ENST00000507852 U3KPZ7 1027 aaPredicted RBP18.18■□□□□ 0.5
SNX2-207ENST00000507852 SLC4A2P04920 1241 aa18.03■□□□□ 0.48
SNX2-207ENST00000507852 CAPN15O75808 1086 aa17.9■□□□□ 0.46
SNX2-207ENST00000507852 SPINK5Q9NQ38 1064 aaPredicted RBP17.87■□□□□ 0.45
SNX2-207ENST00000507852 APLP2Q06481 763 aa17.85■□□□□ 0.45
SNX2-207ENST00000507852 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.83■□□□□ 0.44
SNX2-207ENST00000507852 HNRNPUL2Q1KMD3 747 aaKnown RBP17.83■□□□□ 0.44
SNX2-207ENST00000507852 DSG3P32926 999 aa17.75■□□□□ 0.43
SNX2-207ENST00000507852 SAMD1Q6SPF0 538 aaPredicted RBP17.7■□□□□ 0.42
SNX2-207ENST00000507852 SLC4A1APQ9BWU0 796 aaKnown RBP17.65■□□□□ 0.42
SNX2-207ENST00000507852 ZNF219Q9P2Y4 722 aaPredicted RBP17.65■□□□□ 0.42
SNX2-207ENST00000507852 TRHP20396 242 aaPredicted RBP17.62■□□□□ 0.41
SNX2-207ENST00000507852 MYCNP04198 464 aaPredicted RBP17.57■□□□□ 0.4
SNX2-207ENST00000507852 ABCB7O75027 752 aa17.45■□□□□ 0.38
SNX2-207ENST00000507852 FOXD4L1Q9NU39 408 aa17.41■□□□□ 0.38
SNX2-207ENST00000507852 POLA2Q14181 598 aa17.17■□□□□ 0.34
SNX2-207ENST00000507852 ZBTB22O15209 634 aa17.08■□□□□ 0.32
SNX2-207ENST00000507852 ATF5Q9Y2D1 282 aaPredicted RBP17.04■□□□□ 0.32
SNX2-207ENST00000507852 RBM42Q9BTD8 480 aaKnown RBP17.03■□□□□ 0.32
SNX2-207ENST00000507852 ZBTB12Q9Y330 459 aaPredicted RBP16.93■□□□□ 0.3
SNX2-207ENST00000507852 ATXN8OSP0DMR3 200 aa16.92■□□□□ 0.3
SNX2-207ENST00000507852 POTEHQ6S545 545 aa16.88■□□□□ 0.29
SNX2-207ENST00000507852 AKT1S1Q96B36 256 aa16.62■□□□□ 0.25
SNX2-207ENST00000507852 OSCARQ8IYS5 282 aa16.59■□□□□ 0.25
SNX2-207ENST00000507852 CHRDL2Q6WN34 429 aa16.56■□□□□ 0.24
SNX2-207ENST00000507852 FBLN2P98095 1184 aa16.52■□□□□ 0.24
SNX2-207ENST00000507852 REM2Q8IYK8 340 aaPredicted RBP16.43■□□□□ 0.22
SNX2-207ENST00000507852 CSRNP3Q8WYN3 585 aa16.4■□□□□ 0.22
SNX2-207ENST00000507852 SPDYE2BA6NHP3 402 aa16.36■□□□□ 0.21
SNX2-207ENST00000507852 SPDYE6P0CI01 402 aa16.36■□□□□ 0.21
SNX2-207ENST00000507852 SPDYE2Q495Y8 402 aa16.36■□□□□ 0.21
SNX2-207ENST00000507852 MKRN4PQ13434 485 aaPredicted RBP16.28■□□□□ 0.2
SNX2-207ENST00000507852 EHMT2Q96KQ7 1210 aa16.25■□□□□ 0.19
SNX2-207ENST00000507852 PITPNM1O00562 1244 aa16.23■□□□□ 0.19
SNX2-207ENST00000507852 ZNF692Q9BU19 519 aaPredicted RBP16.17■□□□□ 0.18
SNX2-207ENST00000507852 PIP4P2Q8N4L2 257 aa16.16■□□□□ 0.18
SNX2-207ENST00000507852 SSUH2Q9Y2M2 353 aa16.11■□□□□ 0.17
SNX2-207ENST00000507852 FXR2P51116 673 aaKnown RBP eCLIP16.09■□□□□ 0.17
SNX2-207ENST00000507852 SPDYE1Q8NFV5 336 aaPredicted RBP16.07■□□□□ 0.16
SNX2-207ENST00000507852 CLEC11AQ9Y240 323 aa15.99■□□□□ 0.15
SNX2-207ENST00000507852 PABPN1Q86U42 306 aaKnown RBP eCLIP15.9■□□□□ 0.14
SNX2-207ENST00000507852 HAX1O00165 279 aa15.88■□□□□ 0.13
SNX2-207ENST00000507852 SP7Q8TDD2 431 aaPredicted RBP15.88■□□□□ 0.13
SNX2-207ENST00000507852 PRKAR2AP13861 404 aaKnown RBP15.83■□□□□ 0.12
SNX2-207ENST00000507852 PRR29P0C7W0 189 aa15.77■□□□□ 0.12
SNX2-207ENST00000507852 SPDYE4A6NLX3 237 aa15.63■□□□□ 0.09
SNX2-207ENST00000507852 CHADLQ6NUI6 762 aa15.62■□□□□ 0.09
SNX2-207ENST00000507852 EVX2Q03828 476 aa15.58■□□□□ 0.08
SNX2-207ENST00000507852 C19orf67A6NJJ6 358 aa15.57■□□□□ 0.08
SNX2-207ENST00000507852 STAG3Q9UJ98 1225 aa15.57■□□□□ 0.08
SNX2-207ENST00000507852 FARP1Q9Y4F1 1045 aaPredicted RBP15.46■□□□□ 0.07
SNX2-207ENST00000507852 CD44P16070 742 aaKnown RBP15.35■□□□□ 0.05
SNX2-207ENST00000507852 CREBZFQ9NS37 354 aa15.34■□□□□ 0.05
SNX2-207ENST00000507852 GABBR2O75899 941 aa15.31■□□□□ 0.04
SNX2-207ENST00000507852 PROM2Q8N271 834 aa15.24■□□□□ 0.03
SNX2-207ENST00000507852 CLCN6P51797 869 aa15.23■□□□□ 0.03
SNX2-207ENST00000507852 NPM1P06748 294 aaKnown RBP eCLIP15.16■□□□□ 0.02
SNX2-207ENST00000507852 ZRANB1Q9UGI0 708 aa15.14■□□□□ 0.01
SNX2-207ENST00000507852 PAK3O75914 559 aaPredicted RBP15.12■□□□□ 0.01
SNX2-207ENST00000507852 ZNF579Q8NAF0 562 aaKnown RBP15.12■□□□□ 0.01
SNX2-207ENST00000507852 MNX1P50219 401 aaPredicted RBP15.07■□□□□ 0
SNX2-207ENST00000507852 PLEKHG5O94827 1062 aa14.99□□□□□ -0.01
SNX2-207ENST00000507852 DCBLD2Q96PD2 775 aa14.98□□□□□ -0.01
SNX2-207ENST00000507852 POTEIP0CG38 1075 aa14.93□□□□□ -0.02
SNX2-207ENST00000507852 MIER1Q8N108 512 aa14.93□□□□□ -0.02
SNX2-207ENST00000507852 FKBP8Q14318 412 aa14.91□□□□□ -0.02
SNX2-207ENST00000507852 PHF12Q96QT6 1004 aa14.9□□□□□ -0.02
SNX2-207ENST00000507852 LHX8Q68G74 356 aa14.89□□□□□ -0.03
SNX2-207ENST00000507852 GALR2O43603 387 aaPredicted RBP14.87□□□□□ -0.03
SNX2-207ENST00000507852 PLCD3Q8N3E9 789 aa14.82□□□□□ -0.04
SNX2-207ENST00000507852 TSPYL2Q9H2G4 693 aaPredicted RBP14.81□□□□□ -0.04
SNX2-207ENST00000507852 ZBTB47Q9UFB7 747 aaPredicted RBP14.77□□□□□ -0.05
SNX2-207ENST00000507852 CCDC61Q9Y6R9 512 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms