RNA–Protein interactions for RNA: ENST00000507637.1

SMAD5-204, Transcript of SMAD family member 5, humanhuman

TSL 2

Gene SMAD5, Length 638 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-204ENST00000507637 AEBP2Q6ZN18 517 aaPredicted RBP28.13■■■□□ 2.09
SMAD5-204ENST00000507637 CHIC1Q5VXU3 224 aa27.37■■□□□ 1.97
SMAD5-204ENST00000507637 PHF23Q9BUL5 403 aaPredicted RBP24.08■■□□□ 1.45
SMAD5-204ENST00000507637 SENP3Q9H4L4 574 aaPredicted RBP23.84■■□□□ 1.41
SMAD5-204ENST00000507637 FOXD1Q16676 465 aa22.16■■□□□ 1.14
SMAD5-204ENST00000507637 PLPPR3Q6T4P5 718 aa22.15■■□□□ 1.14
SMAD5-204ENST00000507637 PPP6R1Q9UPN7 881 aa21.27■■□□□ 1
SMAD5-204ENST00000507637 ADRA2BP18089 450 aa21.2■□□□□ 0.98
SMAD5-204ENST00000507637 PIAS4Q8N2W9 510 aaPredicted RBP20.81■□□□□ 0.92
SMAD5-204ENST00000507637 MSH5O43196 834 aa20.45■□□□□ 0.86
SMAD5-204ENST00000507637 PPP4R3CPQ6ZMV5 832 aa19.51■□□□□ 0.71
SMAD5-204ENST00000507637 SCAF1Q9H7N4 1312 aaKnown RBP19.39■□□□□ 0.69
SMAD5-204ENST00000507637 MAPK8IP2Q13387 824 aaPredicted RBP19.27■□□□□ 0.68
SMAD5-204ENST00000507637 DMRT2Q9Y5R5 561 aa19.05■□□□□ 0.64
SMAD5-204ENST00000507637 CNKSR2Q8WXI2 1034 aa19■□□□□ 0.63
SMAD5-204ENST00000507637 KCNA4P22459 653 aa18.94■□□□□ 0.62
SMAD5-204ENST00000507637 NCBP3Q53F19 620 aaKnown RBP18.94■□□□□ 0.62
SMAD5-204ENST00000507637 POTEDQ86YR6 584 aa18.8■□□□□ 0.6
SMAD5-204ENST00000507637 NPM3O75607 178 aaKnown RBP18.7■□□□□ 0.58
SMAD5-204ENST00000507637 RNF216Q9NWF9 866 aaPredicted RBP18.66■□□□□ 0.58
SMAD5-204ENST00000507637 HOXD11P31277 338 aaPredicted RBP18.65■□□□□ 0.58
SMAD5-204ENST00000507637 DNAJC5BQ9UF47 199 aa18.31■□□□□ 0.52
SMAD5-204ENST00000507637 DCAF8L1A6NGE4 600 aa18.08■□□□□ 0.48
SMAD5-204ENST00000507637 SLC4A1APQ9BWU0 796 aaKnown RBP17.99■□□□□ 0.47
SMAD5-204ENST00000507637 SLC4A2P04920 1241 aa17.72■□□□□ 0.43
SMAD5-204ENST00000507637 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.65■□□□□ 0.42
SMAD5-204ENST00000507637 RNF39Q9H2S5 420 aa17.55■□□□□ 0.4
SMAD5-204ENST00000507637 ZBTB22O15209 634 aa17.45■□□□□ 0.38
SMAD5-204ENST00000507637 FOXD4L1Q9NU39 408 aa17.45■□□□□ 0.38
SMAD5-204ENST00000507637 U3KPZ7 1027 aaPredicted RBP17.43■□□□□ 0.38
SMAD5-204ENST00000507637 C1QBPQ07021 282 aaKnown RBP17.32■□□□□ 0.36
SMAD5-204ENST00000507637 EHMT2Q96KQ7 1210 aa17.3■□□□□ 0.36
SMAD5-204ENST00000507637 CSRNP3Q8WYN3 585 aa17.28■□□□□ 0.36
SMAD5-204ENST00000507637 MYCNP04198 464 aaPredicted RBP17.26■□□□□ 0.35
SMAD5-204ENST00000507637 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.14■□□□□ 0.33
SMAD5-204ENST00000507637 HNRNPUL2Q1KMD3 747 aaKnown RBP17.14■□□□□ 0.33
SMAD5-204ENST00000507637 CACNB1Q02641 598 aaPredicted RBP17.08■□□□□ 0.32
SMAD5-204ENST00000507637 SAMD1Q6SPF0 538 aaPredicted RBP17.08■□□□□ 0.32
SMAD5-204ENST00000507637 APLP2Q06481 763 aa16.97■□□□□ 0.31
SMAD5-204ENST00000507637 SPINK5Q9NQ38 1064 aaPredicted RBP16.94■□□□□ 0.3
SMAD5-204ENST00000507637 ATXN8OSP0DMR3 200 aa16.91■□□□□ 0.3
SMAD5-204ENST00000507637 ATF5Q9Y2D1 282 aaPredicted RBP16.84■□□□□ 0.29
SMAD5-204ENST00000507637 CAPN15O75808 1086 aa16.83■□□□□ 0.28
SMAD5-204ENST00000507637 ZNF219Q9P2Y4 722 aaPredicted RBP16.76■□□□□ 0.27
SMAD5-204ENST00000507637 TRHP20396 242 aaPredicted RBP16.72■□□□□ 0.27
SMAD5-204ENST00000507637 DSG3P32926 999 aa16.66■□□□□ 0.26
SMAD5-204ENST00000507637 ABCB7O75027 752 aa16.49■□□□□ 0.23
SMAD5-204ENST00000507637 POLA2Q14181 598 aa16.49■□□□□ 0.23
SMAD5-204ENST00000507637 ZBTB12Q9Y330 459 aaPredicted RBP16.2■□□□□ 0.18
SMAD5-204ENST00000507637 MKRN4PQ13434 485 aaPredicted RBP16.11■□□□□ 0.17
SMAD5-204ENST00000507637 FBLN2P98095 1184 aa16.07■□□□□ 0.16
SMAD5-204ENST00000507637 OSCARQ8IYS5 282 aa15.89■□□□□ 0.13
SMAD5-204ENST00000507637 RBM42Q9BTD8 480 aaKnown RBP15.83■□□□□ 0.12
SMAD5-204ENST00000507637 SPDYE2BA6NHP3 402 aa15.78■□□□□ 0.12
SMAD5-204ENST00000507637 SPDYE6P0CI01 402 aa15.78■□□□□ 0.12
SMAD5-204ENST00000507637 SPDYE2Q495Y8 402 aa15.78■□□□□ 0.12
SMAD5-204ENST00000507637 ZNF692Q9BU19 519 aaPredicted RBP15.67■□□□□ 0.1
SMAD5-204ENST00000507637 SSUH2Q9Y2M2 353 aa15.67■□□□□ 0.1
SMAD5-204ENST00000507637 SPDYE4A6NLX3 237 aa15.65■□□□□ 0.1
SMAD5-204ENST00000507637 AKT1S1Q96B36 256 aa15.65■□□□□ 0.1
SMAD5-204ENST00000507637 FKBP8Q14318 412 aa15.55■□□□□ 0.08
SMAD5-204ENST00000507637 REM2Q8IYK8 340 aaPredicted RBP15.49■□□□□ 0.07
SMAD5-204ENST00000507637 PROM2Q8N271 834 aa15.49■□□□□ 0.07
SMAD5-204ENST00000507637 PABPN1Q86U42 306 aaKnown RBP eCLIP15.46■□□□□ 0.07
SMAD5-204ENST00000507637 SPDYE1Q8NFV5 336 aaPredicted RBP15.31■□□□□ 0.04
SMAD5-204ENST00000507637 PITPNM1O00562 1244 aa15.3■□□□□ 0.04
SMAD5-204ENST00000507637 CHRDL2Q6WN34 429 aa15.22■□□□□ 0.03
SMAD5-204ENST00000507637 STAG3Q9UJ98 1225 aa15.2■□□□□ 0.02
SMAD5-204ENST00000507637 CLEC11AQ9Y240 323 aa15.19■□□□□ 0.02
SMAD5-204ENST00000507637 FXR2P51116 673 aaKnown RBP eCLIP15.09■□□□□ 0.01
SMAD5-204ENST00000507637 PRR29P0C7W0 189 aa15.08■□□□□ 0
SMAD5-204ENST00000507637 FBXO3Q9UK99 471 aa15.05■□□□□ -0
SMAD5-204ENST00000507637 PIP4P2Q8N4L2 257 aa15.02■□□□□ -0
SMAD5-204ENST00000507637 CREBZFQ9NS37 354 aa14.92□□□□□ -0.02
SMAD5-204ENST00000507637 PRKAR2AP13861 404 aaKnown RBP14.89□□□□□ -0.03
SMAD5-204ENST00000507637 CHADLQ6NUI6 762 aa14.86□□□□□ -0.03
SMAD5-204ENST00000507637 VASPP50552 380 aaPredicted RBP14.85□□□□□ -0.03
SMAD5-204ENST00000507637 POTEHQ6S545 545 aa14.85□□□□□ -0.03
SMAD5-204ENST00000507637 MIER1Q8N108 512 aa14.83□□□□□ -0.04
SMAD5-204ENST00000507637 MNX1P50219 401 aaPredicted RBP14.79□□□□□ -0.04
SMAD5-204ENST00000507637 PLCD3Q8N3E9 789 aa14.77□□□□□ -0.05
SMAD5-204ENST00000507637 FARP1Q9Y4F1 1045 aaPredicted RBP14.75□□□□□ -0.05
SMAD5-204ENST00000507637 PLEKHG5O94827 1062 aa14.72□□□□□ -0.05
SMAD5-204ENST00000507637 IFNLR1Q8IU57 520 aaPredicted RBP14.67□□□□□ -0.06
SMAD5-204ENST00000507637 ZBTB47Q9UFB7 747 aaPredicted RBP14.65□□□□□ -0.06
SMAD5-204ENST00000507637 NPM1P06748 294 aaKnown RBP eCLIP14.62□□□□□ -0.07
SMAD5-204ENST00000507637 C19orf67A6NJJ6 358 aa14.56□□□□□ -0.08
SMAD5-204ENST00000507637 KLHL34Q8N239 644 aa14.55□□□□□ -0.08
SMAD5-204ENST00000507637 NUBP1P53384 320 aa14.54□□□□□ -0.08
SMAD5-204ENST00000507637 HAX1O00165 279 aa14.5□□□□□ -0.09
SMAD5-204ENST00000507637 SPOCK2Q92563 424 aa14.48□□□□□ -0.09
SMAD5-204ENST00000507637 EVX2Q03828 476 aa14.46□□□□□ -0.09
SMAD5-204ENST00000507637 RASEFQ8IZ41 740 aa14.46□□□□□ -0.09
SMAD5-204ENST00000507637 CD44P16070 742 aaKnown RBP14.45□□□□□ -0.1
SMAD5-204ENST00000507637 PAK3O75914 559 aaPredicted RBP14.35□□□□□ -0.11
SMAD5-204ENST00000507637 TSPYL2Q9H2G4 693 aaPredicted RBP14.35□□□□□ -0.11
SMAD5-204ENST00000507637 ZRANB1Q9UGI0 708 aa14.35□□□□□ -0.11
SMAD5-204ENST00000507637 FAM212AQ96EL1 285 aa14.34□□□□□ -0.11
SMAD5-204ENST00000507637 CCDC61Q9Y6R9 512 aa14.33□□□□□ -0.12
SMAD5-204ENST00000507637 ZNF579Q8NAF0 562 aaKnown RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 172.5 ms