RNA–Protein interactions for RNA: ENST00000507548.1

ZFYVE16-203, Transcript of zinc finger FYVE-type containing 16, humanhuman

TSL 3

Gene ZFYVE16, Length 308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE16-203ENST00000507548 AEBP2Q6ZN18 517 aaPredicted RBP14.81□□□□□ -0.04
ZFYVE16-203ENST00000507548 CHIC1Q5VXU3 224 aa14.48□□□□□ -0.09
ZFYVE16-203ENST00000507548 PHF23Q9BUL5 403 aaPredicted RBP12.68□□□□□ -0.38
ZFYVE16-203ENST00000507548 SENP3Q9H4L4 574 aaPredicted RBP12.66□□□□□ -0.38
ZFYVE16-203ENST00000507548 PLPPR3Q6T4P5 718 aa11.75□□□□□ -0.53
ZFYVE16-203ENST00000507548 FOXD1Q16676 465 aa11.69□□□□□ -0.54
ZFYVE16-203ENST00000507548 PPP6R1Q9UPN7 881 aa11.18□□□□□ -0.62
ZFYVE16-203ENST00000507548 ADRA2BP18089 450 aa11.14□□□□□ -0.63
ZFYVE16-203ENST00000507548 PIAS4Q8N2W9 510 aaPredicted RBP11□□□□□ -0.65
ZFYVE16-203ENST00000507548 POTEDQ86YR6 584 aa10.96□□□□□ -0.65
ZFYVE16-203ENST00000507548 MSH5O43196 834 aa10.95□□□□□ -0.66
ZFYVE16-203ENST00000507548 SCAF1Q9H7N4 1312 aaKnown RBP10.32□□□□□ -0.76
ZFYVE16-203ENST00000507548 PPP4R3CPQ6ZMV5 832 aa10.3□□□□□ -0.76
ZFYVE16-203ENST00000507548 MAPK8IP2Q13387 824 aaPredicted RBP10.11□□□□□ -0.79
ZFYVE16-203ENST00000507548 DMRT2Q9Y5R5 561 aa10.09□□□□□ -0.79
ZFYVE16-203ENST00000507548 CNKSR2Q8WXI2 1034 aa10.07□□□□□ -0.8
ZFYVE16-203ENST00000507548 NCBP3Q53F19 620 aaKnown RBP10.06□□□□□ -0.8
ZFYVE16-203ENST00000507548 KCNA4P22459 653 aa9.95□□□□□ -0.82
ZFYVE16-203ENST00000507548 RNF216Q9NWF9 866 aaPredicted RBP9.9□□□□□ -0.82
ZFYVE16-203ENST00000507548 HOXD11P31277 338 aaPredicted RBP9.89□□□□□ -0.83
ZFYVE16-203ENST00000507548 NPM3O75607 178 aaKnown RBP9.86□□□□□ -0.83
ZFYVE16-203ENST00000507548 DNAJC5BQ9UF47 199 aa9.76□□□□□ -0.85
ZFYVE16-203ENST00000507548 DCAF8L1A6NGE4 600 aa9.52□□□□□ -0.89
ZFYVE16-203ENST00000507548 CACNB1Q02641 598 aaPredicted RBP9.51□□□□□ -0.89
ZFYVE16-203ENST00000507548 SLC4A1APQ9BWU0 796 aaKnown RBP9.48□□□□□ -0.89
ZFYVE16-203ENST00000507548 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.34□□□□□ -0.91
ZFYVE16-203ENST00000507548 RNF39Q9H2S5 420 aa9.33□□□□□ -0.92
ZFYVE16-203ENST00000507548 SLC4A2P04920 1241 aa9.32□□□□□ -0.92
ZFYVE16-203ENST00000507548 FOXD4L1Q9NU39 408 aa9.24□□□□□ -0.93
ZFYVE16-203ENST00000507548 C1QBPQ07021 282 aaKnown RBP9.22□□□□□ -0.93
ZFYVE16-203ENST00000507548 U3KPZ7 1027 aaPredicted RBP9.2□□□□□ -0.94
ZFYVE16-203ENST00000507548 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.15□□□□□ -0.94
ZFYVE16-203ENST00000507548 MYCNP04198 464 aaPredicted RBP9.15□□□□□ -0.94
ZFYVE16-203ENST00000507548 HNRNPUL2Q1KMD3 747 aaKnown RBP9.15□□□□□ -0.94
ZFYVE16-203ENST00000507548 ZBTB22O15209 634 aa9.14□□□□□ -0.95
ZFYVE16-203ENST00000507548 SAMD1Q6SPF0 538 aaPredicted RBP9.09□□□□□ -0.95
ZFYVE16-203ENST00000507548 APLP2Q06481 763 aa9.08□□□□□ -0.96
ZFYVE16-203ENST00000507548 CSRNP3Q8WYN3 585 aa9.07□□□□□ -0.96
ZFYVE16-203ENST00000507548 EHMT2Q96KQ7 1210 aa9.04□□□□□ -0.96
ZFYVE16-203ENST00000507548 ATXN8OSP0DMR3 200 aa9□□□□□ -0.97
ZFYVE16-203ENST00000507548 ZNF219Q9P2Y4 722 aaPredicted RBP8.92□□□□□ -0.98
ZFYVE16-203ENST00000507548 SPINK5Q9NQ38 1064 aaPredicted RBP8.91□□□□□ -0.98
ZFYVE16-203ENST00000507548 CAPN15O75808 1086 aa8.89□□□□□ -0.99
ZFYVE16-203ENST00000507548 ATF5Q9Y2D1 282 aaPredicted RBP8.82□□□□□ -1
ZFYVE16-203ENST00000507548 TRHP20396 242 aaPredicted RBP8.81□□□□□ -1
ZFYVE16-203ENST00000507548 DSG3P32926 999 aa8.81□□□□□ -1
ZFYVE16-203ENST00000507548 POLA2Q14181 598 aa8.69□□□□□ -1.02
ZFYVE16-203ENST00000507548 ABCB7O75027 752 aa8.67□□□□□ -1.02
ZFYVE16-203ENST00000507548 ZBTB12Q9Y330 459 aaPredicted RBP8.64□□□□□ -1.03
ZFYVE16-203ENST00000507548 POTEHQ6S545 545 aa8.56□□□□□ -1.04
ZFYVE16-203ENST00000507548 FBLN2P98095 1184 aa8.53□□□□□ -1.04
ZFYVE16-203ENST00000507548 MKRN4PQ13434 485 aaPredicted RBP8.47□□□□□ -1.05
ZFYVE16-203ENST00000507548 RBM42Q9BTD8 480 aaKnown RBP8.45□□□□□ -1.06
ZFYVE16-203ENST00000507548 SPDYE2BA6NHP3 402 aa8.38□□□□□ -1.07
ZFYVE16-203ENST00000507548 SPDYE6P0CI01 402 aa8.38□□□□□ -1.07
ZFYVE16-203ENST00000507548 SPDYE2Q495Y8 402 aa8.38□□□□□ -1.07
ZFYVE16-203ENST00000507548 OSCARQ8IYS5 282 aa8.37□□□□□ -1.07
ZFYVE16-203ENST00000507548 AKT1S1Q96B36 256 aa8.32□□□□□ -1.08
ZFYVE16-203ENST00000507548 SSUH2Q9Y2M2 353 aa8.3□□□□□ -1.08
ZFYVE16-203ENST00000507548 ZNF692Q9BU19 519 aaPredicted RBP8.28□□□□□ -1.08
ZFYVE16-203ENST00000507548 SPDYE4A6NLX3 237 aa8.26□□□□□ -1.09
ZFYVE16-203ENST00000507548 PROM2Q8N271 834 aa8.2□□□□□ -1.1
ZFYVE16-203ENST00000507548 CHRDL2Q6WN34 429 aa8.18□□□□□ -1.1
ZFYVE16-203ENST00000507548 REM2Q8IYK8 340 aaPredicted RBP8.18□□□□□ -1.1
ZFYVE16-203ENST00000507548 FKBP8Q14318 412 aa8.17□□□□□ -1.1
ZFYVE16-203ENST00000507548 PABPN1Q86U42 306 aaKnown RBP eCLIP8.15□□□□□ -1.1
ZFYVE16-203ENST00000507548 SPDYE1Q8NFV5 336 aaPredicted RBP8.13□□□□□ -1.11
ZFYVE16-203ENST00000507548 STAG3Q9UJ98 1225 aa8.1□□□□□ -1.11
ZFYVE16-203ENST00000507548 PITPNM1O00562 1244 aa8.07□□□□□ -1.12
ZFYVE16-203ENST00000507548 CLEC11AQ9Y240 323 aa8.01□□□□□ -1.13
ZFYVE16-203ENST00000507548 FBXO3Q9UK99 471 aa8□□□□□ -1.13
ZFYVE16-203ENST00000507548 FXR2P51116 673 aaKnown RBP eCLIP7.99□□□□□ -1.13
ZFYVE16-203ENST00000507548 PRR29P0C7W0 189 aa7.98□□□□□ -1.13
ZFYVE16-203ENST00000507548 PIP4P2Q8N4L2 257 aa7.95□□□□□ -1.14
ZFYVE16-203ENST00000507548 SP7Q8TDD2 431 aaPredicted RBP7.95□□□□□ -1.14
ZFYVE16-203ENST00000507548 PRKAR2AP13861 404 aaKnown RBP7.87□□□□□ -1.15
ZFYVE16-203ENST00000507548 CREBZFQ9NS37 354 aa7.86□□□□□ -1.15
ZFYVE16-203ENST00000507548 HAX1O00165 279 aa7.85□□□□□ -1.15
ZFYVE16-203ENST00000507548 PLEKHG5O94827 1062 aa7.85□□□□□ -1.15
ZFYVE16-203ENST00000507548 VASPP50552 380 aaPredicted RBP7.83□□□□□ -1.16
ZFYVE16-203ENST00000507548 MIER1Q8N108 512 aa7.82□□□□□ -1.16
ZFYVE16-203ENST00000507548 ZBTB47Q9UFB7 747 aaPredicted RBP7.82□□□□□ -1.16
ZFYVE16-203ENST00000507548 MNX1P50219 401 aaPredicted RBP7.8□□□□□ -1.16
ZFYVE16-203ENST00000507548 CHADLQ6NUI6 762 aa7.8□□□□□ -1.16
ZFYVE16-203ENST00000507548 PLCD3Q8N3E9 789 aa7.8□□□□□ -1.16
ZFYVE16-203ENST00000507548 FARP1Q9Y4F1 1045 aaPredicted RBP7.8□□□□□ -1.16
ZFYVE16-203ENST00000507548 NPM1P06748 294 aaKnown RBP eCLIP7.77□□□□□ -1.17
ZFYVE16-203ENST00000507548 EVX2Q03828 476 aa7.72□□□□□ -1.17
ZFYVE16-203ENST00000507548 C19orf67A6NJJ6 358 aa7.71□□□□□ -1.18
ZFYVE16-203ENST00000507548 IFNLR1Q8IU57 520 aaPredicted RBP7.71□□□□□ -1.18
ZFYVE16-203ENST00000507548 KLHL34Q8N239 644 aa7.67□□□□□ -1.18
ZFYVE16-203ENST00000507548 NUBP1P53384 320 aa7.66□□□□□ -1.18
ZFYVE16-203ENST00000507548 CLCN6P51797 869 aa7.65□□□□□ -1.18
ZFYVE16-203ENST00000507548 SPOCK2Q92563 424 aa7.65□□□□□ -1.18
ZFYVE16-203ENST00000507548 PAK3O75914 559 aaPredicted RBP7.64□□□□□ -1.19
ZFYVE16-203ENST00000507548 CD44P16070 742 aaKnown RBP7.64□□□□□ -1.19
ZFYVE16-203ENST00000507548 GSE1Q14687 1217 aa7.6□□□□□ -1.19
ZFYVE16-203ENST00000507548 RASEFQ8IZ41 740 aa7.6□□□□□ -1.19
ZFYVE16-203ENST00000507548 FAM212AQ96EL1 285 aa7.6□□□□□ -1.19
ZFYVE16-203ENST00000507548 ZNF579Q8NAF0 562 aaKnown RBP7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 160 ms