RNA–Protein interactions for RNA: ENST00000507306.1

CALCOCO2-210, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 561 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-210ENST00000507306 AEBP2Q6ZN18 517 aaPredicted RBP22.83■■□□□ 1.25
CALCOCO2-210ENST00000507306 CHIC1Q5VXU3 224 aa21.13■□□□□ 0.97
CALCOCO2-210ENST00000507306 SENP3Q9H4L4 574 aaPredicted RBP19.32■□□□□ 0.68
CALCOCO2-210ENST00000507306 PHF23Q9BUL5 403 aaPredicted RBP19.09■□□□□ 0.65
CALCOCO2-210ENST00000507306 FOXD1Q16676 465 aa18.2■□□□□ 0.5
CALCOCO2-210ENST00000507306 POTEDQ86YR6 584 aa17.5■□□□□ 0.39
CALCOCO2-210ENST00000507306 MSH5O43196 834 aa17.03■□□□□ 0.32
CALCOCO2-210ENST00000507306 PIAS4Q8N2W9 510 aaPredicted RBP16.83■□□□□ 0.28
CALCOCO2-210ENST00000507306 PPP6R1Q9UPN7 881 aa16.76■□□□□ 0.27
CALCOCO2-210ENST00000507306 ADRA2BP18089 450 aa16.64■□□□□ 0.25
CALCOCO2-210ENST00000507306 PLPPR3Q6T4P5 718 aa16.6■□□□□ 0.25
CALCOCO2-210ENST00000507306 MAPK8IP2Q13387 824 aaPredicted RBP15.45■□□□□ 0.06
CALCOCO2-210ENST00000507306 DMRT2Q9Y5R5 561 aa15.32■□□□□ 0.04
CALCOCO2-210ENST00000507306 SCAF1Q9H7N4 1312 aaKnown RBP14.97□□□□□ -0.01
CALCOCO2-210ENST00000507306 CACNB1Q02641 598 aaPredicted RBP14.91□□□□□ -0.02
CALCOCO2-210ENST00000507306 DCAF8L1A6NGE4 600 aa14.68□□□□□ -0.06
CALCOCO2-210ENST00000507306 RNF39Q9H2S5 420 aa14.6□□□□□ -0.07
CALCOCO2-210ENST00000507306 HOXD11P31277 338 aaPredicted RBP14.58□□□□□ -0.08
CALCOCO2-210ENST00000507306 PPP4R3CPQ6ZMV5 832 aa14.57□□□□□ -0.08
CALCOCO2-210ENST00000507306 CNKSR2Q8WXI2 1034 aa14.33□□□□□ -0.12
CALCOCO2-210ENST00000507306 RNF216Q9NWF9 866 aaPredicted RBP14.32□□□□□ -0.12
CALCOCO2-210ENST00000507306 C1QBPQ07021 282 aaKnown RBP14.26□□□□□ -0.13
CALCOCO2-210ENST00000507306 DNAJC5BQ9UF47 199 aa14.05□□□□□ -0.16
CALCOCO2-210ENST00000507306 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.83□□□□□ -0.29e-8■■■□□ 17.4
CALCOCO2-210ENST00000507306 NCBP3Q53F19 620 aaKnown RBP13.73□□□□□ -0.21
CALCOCO2-210ENST00000507306 NPM3O75607 178 aaKnown RBP13.72□□□□□ -0.21
CALCOCO2-210ENST00000507306 U3KPZ7 1027 aaPredicted RBP13.62□□□□□ -0.23
CALCOCO2-210ENST00000507306 POTEHQ6S545 545 aa13.58□□□□□ -0.24
CALCOCO2-210ENST00000507306 SPINK5Q9NQ38 1064 aaPredicted RBP13.58□□□□□ -0.24
CALCOCO2-210ENST00000507306 DSG3P32926 999 aa13.54□□□□□ -0.24
CALCOCO2-210ENST00000507306 CAPN15O75808 1086 aa13.45□□□□□ -0.26
CALCOCO2-210ENST00000507306 SLC4A2P04920 1241 aa13.26□□□□□ -0.29
CALCOCO2-210ENST00000507306 ABCB7O75027 752 aa13.19□□□□□ -0.3
CALCOCO2-210ENST00000507306 KCNA4P22459 653 aa13.17□□□□□ -0.3
CALCOCO2-210ENST00000507306 TRHP20396 242 aaPredicted RBP13.16□□□□□ -0.3
CALCOCO2-210ENST00000507306 ZNF219Q9P2Y4 722 aaPredicted RBP13.03□□□□□ -0.32
CALCOCO2-210ENST00000507306 APLP2Q06481 763 aa12.91□□□□□ -0.34
CALCOCO2-210ENST00000507306 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.84□□□□□ -0.35
CALCOCO2-210ENST00000507306 HNRNPUL2Q1KMD3 747 aaKnown RBP12.84□□□□□ -0.35
CALCOCO2-210ENST00000507306 SAMD1Q6SPF0 538 aaPredicted RBP12.81□□□□□ -0.36
CALCOCO2-210ENST00000507306 CHRDL2Q6WN34 429 aa12.77□□□□□ -0.37
CALCOCO2-210ENST00000507306 RBM42Q9BTD8 480 aaKnown RBP12.76□□□□□ -0.37
CALCOCO2-210ENST00000507306 POLA2Q14181 598 aa12.71□□□□□ -0.37
CALCOCO2-210ENST00000507306 MYCNP04198 464 aaPredicted RBP12.6□□□□□ -0.39
CALCOCO2-210ENST00000507306 SLC4A1APQ9BWU0 796 aaKnown RBP12.59□□□□□ -0.39
CALCOCO2-210ENST00000507306 ATF5Q9Y2D1 282 aaPredicted RBP12.54□□□□□ -0.4
CALCOCO2-210ENST00000507306 SP7Q8TDD2 431 aaPredicted RBP12.52□□□□□ -0.41
CALCOCO2-210ENST00000507306 AKT1S1Q96B36 256 aa12.44□□□□□ -0.42
CALCOCO2-210ENST00000507306 PIP4P2Q8N4L2 257 aa12.42□□□□□ -0.42
CALCOCO2-210ENST00000507306 REM2Q8IYK8 340 aaPredicted RBP12.4□□□□□ -0.42
CALCOCO2-210ENST00000507306 OSCARQ8IYS5 282 aa12.39□□□□□ -0.43
CALCOCO2-210ENST00000507306 PITPNM1O00562 1244 aa12.31□□□□□ -0.44
CALCOCO2-210ENST00000507306 FOXD4L1Q9NU39 408 aa12.29□□□□□ -0.44
CALCOCO2-210ENST00000507306 ZBTB12Q9Y330 459 aaPredicted RBP12.27□□□□□ -0.45
CALCOCO2-210ENST00000507306 FXR2P51116 673 aaKnown RBP eCLIP12.25□□□□□ -0.45
CALCOCO2-210ENST00000507306 EVX2Q03828 476 aa12.24□□□□□ -0.45
CALCOCO2-210ENST00000507306 HAX1O00165 279 aa12.23□□□□□ -0.45
CALCOCO2-210ENST00000507306 ZBTB22O15209 634 aa12.14□□□□□ -0.47
CALCOCO2-210ENST00000507306 ATXN8OSP0DMR3 200 aa11.96□□□□□ -0.49
CALCOCO2-210ENST00000507306 PRKAR2AP13861 404 aaKnown RBP11.94□□□□□ -0.5
CALCOCO2-210ENST00000507306 SPDYE2BA6NHP3 402 aa11.93□□□□□ -0.5
CALCOCO2-210ENST00000507306 SPDYE6P0CI01 402 aa11.93□□□□□ -0.5
CALCOCO2-210ENST00000507306 SPDYE2Q495Y8 402 aa11.93□□□□□ -0.5
CALCOCO2-210ENST00000507306 MKRN4PQ13434 485 aaPredicted RBP11.91□□□□□ -0.5
CALCOCO2-210ENST00000507306 C19orf67A6NJJ6 358 aa11.88□□□□□ -0.51
CALCOCO2-210ENST00000507306 EHMT2Q96KQ7 1210 aa11.87□□□□□ -0.51
CALCOCO2-210ENST00000507306 CLEC11AQ9Y240 323 aa11.86□□□□□ -0.51
CALCOCO2-210ENST00000507306 FBLN2P98095 1184 aa11.83□□□□□ -0.52
CALCOCO2-210ENST00000507306 GABBR2O75899 941 aa11.82□□□□□ -0.52
CALCOCO2-210ENST00000507306 CSRNP3Q8WYN3 585 aa11.82□□□□□ -0.52
CALCOCO2-210ENST00000507306 SPDYE1Q8NFV5 336 aaPredicted RBP11.81□□□□□ -0.52
CALCOCO2-210ENST00000507306 SSUH2Q9Y2M2 353 aa11.81□□□□□ -0.52
CALCOCO2-210ENST00000507306 CHADLQ6NUI6 762 aa11.79□□□□□ -0.52
CALCOCO2-210ENST00000507306 ZNF692Q9BU19 519 aaPredicted RBP11.74□□□□□ -0.53
CALCOCO2-210ENST00000507306 LHX8Q68G74 356 aa11.73□□□□□ -0.53
CALCOCO2-210ENST00000507306 POTEIP0CG38 1075 aa11.66□□□□□ -0.54
CALCOCO2-210ENST00000507306 PABPN1Q86U42 306 aaKnown RBP eCLIP11.6□□□□□ -0.55
CALCOCO2-210ENST00000507306 PRR29P0C7W0 189 aa11.57□□□□□ -0.56
CALCOCO2-210ENST00000507306 CD44P16070 742 aaKnown RBP11.53□□□□□ -0.56
CALCOCO2-210ENST00000507306 FARP1Q9Y4F1 1045 aaPredicted RBP11.49□□□□□ -0.57
CALCOCO2-210ENST00000507306 ZNF579Q8NAF0 562 aaKnown RBP11.33□□□□□ -0.6
CALCOCO2-210ENST00000507306 PLSCR2Q9NRY7 297 aa11.33□□□□□ -0.6
CALCOCO2-210ENST00000507306 GALR2O43603 387 aaPredicted RBP11.3□□□□□ -0.6
CALCOCO2-210ENST00000507306 DCBLD2Q96PD2 775 aa11.3□□□□□ -0.6
CALCOCO2-210ENST00000507306 CREBZFQ9NS37 354 aa11.3□□□□□ -0.6
CALCOCO2-210ENST00000507306 ZRANB1Q9UGI0 708 aa11.29□□□□□ -0.6
CALCOCO2-210ENST00000507306 POTEB2H3BUK9 544 aa11.28□□□□□ -0.6
CALCOCO2-210ENST00000507306 OTUD5Q96G74 571 aa11.26□□□□□ -0.61
CALCOCO2-210ENST00000507306 CLCN6P51797 869 aa11.25□□□□□ -0.61
CALCOCO2-210ENST00000507306 PHF12Q96QT6 1004 aa11.19□□□□□ -0.62
CALCOCO2-210ENST00000507306 PELP1Q8IZL8 1130 aaKnown RBP11.16□□□□□ -0.62
CALCOCO2-210ENST00000507306 MNX1P50219 401 aaPredicted RBP11.09□□□□□ -0.63
CALCOCO2-210ENST00000507306 POTEMA6NI47 508 aa11.08□□□□□ -0.64
CALCOCO2-210ENST00000507306 POTEJP0CG39 1038 aa11.07□□□□□ -0.64
CALCOCO2-210ENST00000507306 SPDYE4A6NLX3 237 aa11.04□□□□□ -0.64
CALCOCO2-210ENST00000507306 POTEGQ6S5H5 508 aa11.04□□□□□ -0.64
CALCOCO2-210ENST00000507306 STAG3Q9UJ98 1225 aa11.04□□□□□ -0.64
CALCOCO2-210ENST00000507306 MS4A3Q96HJ5 214 aa11□□□□□ -0.65
CALCOCO2-210ENST00000507306 LCE2DQ5TA82 110 aaPredicted RBP10.98□□□□□ -0.65
CALCOCO2-210ENST00000507306 PAK3O75914 559 aaPredicted RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms