RNA–Protein interactions for RNA: ENST00000506928.5

POLK-208, Transcript of DNA polymerase kappa, human

TSL 5

Gene POLK, Length 3,820 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLK-208	ENST00000506928	SLC24A1	O60721	1099 aa		9.57	□□□□□ -0.88
POLK-208	ENST00000506928	EHMT2	Q96KQ7	1210 aa		8.87	□□□□□ -0.99
POLK-208	ENST00000506928	PLPPR3	Q6T4P5	718 aa		8.79	□□□□□ -1
POLK-208	ENST00000506928	PRKCSH	P14314	528 aa	Predicted RBP	8.71	□□□□□ -1.02
POLK-208	ENST00000506928	DAXX	Q9UER7	740 aa	Predicted RBP	8.67	□□□□□ -1.02
POLK-208	ENST00000506928	RTN4	Q9NQC3	1192 aa	Known RBP	8.62	□□□□□ -1.03
POLK-208	ENST00000506928	MYO15B	Q96JP2	1530 aa		8.5	□□□□□ -1.05
POLK-208	ENST00000506928	APLP2	Q06481	763 aa		8.46	□□□□□ -1.06
POLK-208	ENST00000506928	MYT1	Q01538	1121 aa		8.43	□□□□□ -1.06
POLK-208	ENST00000506928	NCBP3	Q53F19	620 aa	Known RBP	8.4	□□□□□ -1.07
POLK-208	ENST00000506928	PELP1	Q8IZL8	1130 aa	Known RBP	8.35	□□□□□ -1.07
POLK-208	ENST00000506928	ERICH6	Q7L0X2	663 aa		8.35	□□□□□ -1.07
POLK-208	ENST00000506928	TTBK1	Q5TCY1	1321 aa	Predicted RBP	8.34	□□□□□ -1.07
POLK-208	ENST00000506928	CHIC1	Q5VXU3	224 aa		8.3	□□□□□ -1.08
POLK-208	ENST00000506928	TIMELESS	Q9UNS1	1208 aa		8.25	□□□□□ -1.09
POLK-208	ENST00000506928	KCNA4	P22459	653 aa		8.19	□□□□□ -1.1
POLK-208	ENST00000506928	KLHL34	Q8N239	644 aa		8.12	□□□□□ -1.11
POLK-208	ENST00000506928	TULP1	O00294	542 aa	Predicted RBP	8.11	□□□□□ -1.11
POLK-208	ENST00000506928	EIF5B	O60841	1220 aa	Known RBP	8.09	□□□□□ -1.11
POLK-208	ENST00000506928	AMER1	Q5JTC6	1135 aa	Predicted RBP	8.08	□□□□□ -1.12
POLK-208	ENST00000506928	PLEKHG5	O94827	1062 aa		8.07	□□□□□ -1.12
POLK-208	ENST00000506928	CSRNP3	Q8WYN3	585 aa		8.05	□□□□□ -1.12
POLK-208	ENST00000506928	AEBP2	Q6ZN18	517 aa	Predicted RBP	8.04	□□□□□ -1.12
POLK-208	ENST00000506928	ARX	Q96QS3	562 aa		8.03	□□□□□ -1.12
POLK-208	ENST00000506928	RANGAP1	P46060	587 aa	Predicted RBP	7.94	□□□□□ -1.14
POLK-208	ENST00000506928	TAOK2	Q9UL54	1235 aa		7.93	□□□□□ -1.14
POLK-208	ENST00000506928	PODXL2	Q9NZ53	605 aa		7.93	□□□□□ -1.14
POLK-208	ENST00000506928	NISCH	Q9Y2I1	1504 aa		7.93	□□□□□ -1.14
POLK-208	ENST00000506928	CCDC180	Q9P1Z9	1646 aa		7.9	□□□□□ -1.15
POLK-208	ENST00000506928	TPRN	Q4KMQ1	711 aa		7.88	□□□□□ -1.15
POLK-208	ENST00000506928	HOMEZ	Q8IX15	550 aa		7.83	□□□□□ -1.16
POLK-208	ENST00000506928	BCL11A	Q9H165	835 aa		7.8	□□□□□ -1.16
POLK-208	ENST00000506928	EIF4G1	Q04637	1599 aa	Known RBP	7.79	□□□□□ -1.16
POLK-208	ENST00000506928	PHF23	Q9BUL5	403 aa	Predicted RBP	7.72	□□□□□ -1.17
POLK-208	ENST00000506928	NPM2	Q86SE8	214 aa	Known RBP	7.68	□□□□□ -1.18
POLK-208	ENST00000506928	FAM9A	Q8IZU1	332 aa	Predicted RBP	7.67	□□□□□ -1.18
POLK-208	ENST00000506928	GTF3C3	Q9Y5Q9	886 aa		7.67	□□□□□ -1.18
POLK-208	ENST00000506928	C14orf37	Q86TY3	774 aa		7.67	□□□□□ -1.18
POLK-208	ENST00000506928	BCAN	Q96GW7	911 aa		7.67	□□□□□ -1.18
POLK-208	ENST00000506928	DCAF1	Q9Y4B6	1507 aa		7.67	□□□□□ -1.18
POLK-208	ENST00000506928	LOC105371045	A0A1W2PR82	267 aa		7.62	□□□□□ -1.19
POLK-208	ENST00000506928	SCAF1	Q9H7N4	1312 aa	Known RBP	7.61	□□□□□ -1.19
POLK-208	ENST00000506928	HAP1	P54257	671 aa	Predicted RBP	7.59	□□□□□ -1.19
POLK-208	ENST00000506928	TRIM26	Q12899	539 aa	Predicted RBP	7.58	□□□□□ -1.2
POLK-208	ENST00000506928	PLCB2	Q00722	1185 aa		7.57	□□□□□ -1.2
POLK-208	ENST00000506928	SUPT5H	O00267	1087 aa	Known RBP	7.56	□□□□□ -1.2
POLK-208	ENST00000506928	HRC	P23327	699 aa		7.53	□□□□□ -1.2
POLK-208	ENST00000506928	PDIA4	P13667	645 aa	Known RBP	7.5	□□□□□ -1.21
POLK-208	ENST00000506928	UBTF	P17480	764 aa	Known RBP	7.49	□□□□□ -1.21
POLK-208	ENST00000506928	DHX37	Q8IY37	1157 aa	Known RBP	7.48	□□□□□ -1.21
POLK-208	ENST00000506928	TMEM132A	Q24JP5	1023 aa		7.48	□□□□□ -1.21
POLK-208	ENST00000506928	SLC4A1AP	Q9BWU0	796 aa	Known RBP	7.46	□□□□□ -1.21
POLK-208	ENST00000506928	CHMP4A	Q9BY43	222 aa		7.46	□□□□□ -1.22
POLK-208	ENST00000506928	PPP6R1	Q9UPN7	881 aa		7.41	□□□□□ -1.22
POLK-208	ENST00000506928	UBE2Q2	Q8WVN8	375 aa		7.38	□□□□□ -1.23
POLK-208	ENST00000506928	PDE4C	Q08493	712 aa		7.38	□□□□□ -1.23
POLK-208	ENST00000506928	FBLN2	P98095	1184 aa		7.37	□□□□□ -1.23
POLK-208	ENST00000506928	KDM2A	Q9Y2K7	1162 aa		7.37	□□□□□ -1.23
POLK-208	ENST00000506928	ZBTB22	O15209	634 aa		7.37	□□□□□ -1.23
POLK-208	ENST00000506928	SAMD1	Q6SPF0	538 aa	Predicted RBP	7.36	□□□□□ -1.23
POLK-208	ENST00000506928	CFAP44	Q96MT7	982 aa		7.34	□□□□□ -1.23
POLK-208	ENST00000506928	IGSF3	O75054	1194 aa		7.31	□□□□□ -1.24
POLK-208	ENST00000506928	FBXO3	Q9UK99	471 aa		7.31	□□□□□ -1.24
POLK-208	ENST00000506928	BCL11B	Q9C0K0	894 aa	Predicted RBP	7.29	□□□□□ -1.24
POLK-208	ENST00000506928	PKNOX2	Q96KN3	472 aa		7.26	□□□□□ -1.25
POLK-208	ENST00000506928	CCDC136	Q96JN2	1154 aa		7.23	□□□□□ -1.25
POLK-208	ENST00000506928	IRX6	P78412	446 aa	Predicted RBP	7.22	□□□□□ -1.25
POLK-208	ENST00000506928	CDK11B	P21127	795 aa	Known RBP	7.21	□□□□□ -1.25
POLK-208	ENST00000506928	FKBP8	Q14318	412 aa		7.21	□□□□□ -1.25
POLK-208	ENST00000506928	CDK11A	Q9UQ88	783 aa	Predicted RBP	7.21	□□□□□ -1.25
POLK-208	ENST00000506928	DCAF8L2	P0C7V8	631 aa		7.21	□□□□□ -1.26
POLK-208	ENST00000506928	ANO8	Q9HCE9	1232 aa	Predicted RBP	7.2	□□□□□ -1.26
POLK-208	ENST00000506928	ADRA2B	P18089	450 aa		7.19	□□□□□ -1.26
POLK-208	ENST00000506928	BRD2	P25440	801 aa	Known RBP	7.19	□□□□□ -1.26
POLK-208	ENST00000506928	NEFL	P07196	543 aa		7.17	□□□□□ -1.26
POLK-208	ENST00000506928	TAF7L	Q5H9L4	462 aa		7.17	□□□□□ -1.26
POLK-208	ENST00000506928	PPARGC1B	Q86YN6	1023 aa	Known RBP	7.16	□□□□□ -1.26
POLK-208	ENST00000506928	CNKSR2	Q8WXI2	1034 aa		7.16	□□□□□ -1.26
POLK-208	ENST00000506928	VSIG10	Q8N0Z9	540 aa		7.15	□□□□□ -1.26
POLK-208	ENST00000506928	ZCCHC6	Q5VYS8	1495 aa	Known RBP	7.15	□□□□□ -1.26
POLK-208	ENST00000506928	POLR1A	O95602	1720 aa	Predicted RBP	7.15	□□□□□ -1.26
POLK-208	ENST00000506928	VIRMA	Q69YN4	1812 aa	Known RBP	7.15	□□□□□ -1.27
POLK-208	ENST00000506928	POLR3GL	Q9BT43	218 aa		7.14	□□□□□ -1.27
POLK-208	ENST00000506928	ARID3A	Q99856	593 aa		7.14	□□□□□ -1.27
POLK-208	ENST00000506928	TRH	P20396	242 aa	Predicted RBP	7.13	□□□□□ -1.27
POLK-208	ENST00000506928		A0A0U1RQG5	324 aa	Predicted RBP	7.11	□□□□□ -1.27
POLK-208	ENST00000506928	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	7.11	□□□□□ -1.27
POLK-208	ENST00000506928	NCAPD3	P42695	1498 aa		7.1	□□□□□ -1.27
POLK-208	ENST00000506928	FGD1	P98174	961 aa		7.1	□□□□□ -1.27
POLK-208	ENST00000506928	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	7.1	□□□□□ -1.27
POLK-208	ENST00000506928	KDM5B	Q9UGL1	1544 aa		7.09	□□□□□ -1.27
POLK-208	ENST00000506928	NACAD	O15069	1562 aa		7.08	□□□□□ -1.28
POLK-208	ENST00000506928	ZNF428	Q96B54	188 aa		7.06	□□□□□ -1.28
POLK-208	ENST00000506928	ABCC9	O60706	1549 aa		7.06	□□□□□ -1.28
POLK-208	ENST00000506928	NECTIN2	Q92692	538 aa		7.02	□□□□□ -1.29
POLK-208	ENST00000506928	NPM3	O75607	178 aa	Known RBP	7.02	□□□□□ -1.29
POLK-208	ENST00000506928	ZEB1	P37275	1124 aa	Predicted RBP	7.01	□□□□□ -1.29
POLK-208	ENST00000506928	SHROOM4	Q9ULL8	1493 aa		7	□□□□□ -1.29
POLK-208	ENST00000506928	BRPF3	Q9ULD4	1205 aa		7	□□□□□ -1.29
POLK-208	ENST00000506928	HSP90B1	P14625	803 aa	Known RBP	6.99	□□□□□ -1.29

Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms