RNA–Protein interactions for RNA: ENST00000506847.5

SNX2-204, Transcript of sorting nexin 2, humanhuman

TSL 5

Gene SNX2, Length 798 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-204ENST00000506847 AEBP2Q6ZN18 517 aaPredicted RBP27.19■■□□□ 1.94
SNX2-204ENST00000506847 CHIC1Q5VXU3 224 aa26.63■■□□□ 1.85
SNX2-204ENST00000506847 PHF23Q9BUL5 403 aaPredicted RBP23.33■■□□□ 1.33
SNX2-204ENST00000506847 SENP3Q9H4L4 574 aaPredicted RBP23.24■■□□□ 1.31
SNX2-204ENST00000506847 PLPPR3Q6T4P5 718 aa21.68■■□□□ 1.06
SNX2-204ENST00000506847 FOXD1Q16676 465 aa21.46■■□□□ 1.03
SNX2-204ENST00000506847 ADRA2BP18089 450 aa20.58■□□□□ 0.89
SNX2-204ENST00000506847 PPP6R1Q9UPN7 881 aa20.57■□□□□ 0.88
SNX2-204ENST00000506847 PIAS4Q8N2W9 510 aaPredicted RBP20.3■□□□□ 0.84
SNX2-204ENST00000506847 MSH5O43196 834 aa19.94■□□□□ 0.78
SNX2-204ENST00000506847 PPP4R3CPQ6ZMV5 832 aa19.04■□□□□ 0.64
SNX2-204ENST00000506847 POTEDQ86YR6 584 aa19.02■□□□□ 0.64
SNX2-204ENST00000506847 SCAF1Q9H7N4 1312 aaKnown RBP19.01■□□□□ 0.63
SNX2-204ENST00000506847 NCBP3Q53F19 620 aaKnown RBP18.65■□□□□ 0.58
SNX2-204ENST00000506847 MAPK8IP2Q13387 824 aaPredicted RBP18.64■□□□□ 0.57
SNX2-204ENST00000506847 CNKSR2Q8WXI2 1034 aa18.56■□□□□ 0.56
SNX2-204ENST00000506847 KCNA4P22459 653 aa18.52■□□□□ 0.56
SNX2-204ENST00000506847 DMRT2Q9Y5R5 561 aa18.51■□□□□ 0.55
SNX2-204ENST00000506847 NPM3O75607 178 aaKnown RBP18.25■□□□□ 0.51
SNX2-204ENST00000506847 RNF216Q9NWF9 866 aaPredicted RBP18.21■□□□□ 0.51
SNX2-204ENST00000506847 HOXD11P31277 338 aaPredicted RBP18.11■□□□□ 0.49
SNX2-204ENST00000506847 DNAJC5BQ9UF47 199 aa17.81■□□□□ 0.44
SNX2-204ENST00000506847 DCAF8L1A6NGE4 600 aa17.71■□□□□ 0.43
SNX2-204ENST00000506847 SLC4A1APQ9BWU0 796 aaKnown RBP17.71■□□□□ 0.43
SNX2-204ENST00000506847 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.29■□□□□ 0.361e-7■□□□□ 10.1
SNX2-204ENST00000506847 SLC4A2P04920 1241 aa17.19■□□□□ 0.34
SNX2-204ENST00000506847 FOXD4L1Q9NU39 408 aa17.14■□□□□ 0.33
SNX2-204ENST00000506847 EHMT2Q96KQ7 1210 aa17.12■□□□□ 0.33
SNX2-204ENST00000506847 RNF39Q9H2S5 420 aa17.01■□□□□ 0.31
SNX2-204ENST00000506847 ZBTB22O15209 634 aa16.99■□□□□ 0.31
SNX2-204ENST00000506847 MYCNP04198 464 aaPredicted RBP16.94■□□□□ 0.3
SNX2-204ENST00000506847 U3KPZ7 1027 aaPredicted RBP16.94■□□□□ 0.3
SNX2-204ENST00000506847 CSRNP3Q8WYN3 585 aa16.91■□□□□ 0.3
SNX2-204ENST00000506847 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.89■□□□□ 0.29
SNX2-204ENST00000506847 HNRNPUL2Q1KMD3 747 aaKnown RBP16.89■□□□□ 0.29
SNX2-204ENST00000506847 C1QBPQ07021 282 aaKnown RBP16.87■□□□□ 0.29
SNX2-204ENST00000506847 SAMD1Q6SPF0 538 aaPredicted RBP16.79■□□□□ 0.28
SNX2-204ENST00000506847 APLP2Q06481 763 aa16.76■□□□□ 0.27
SNX2-204ENST00000506847 ATXN8OSP0DMR3 200 aa16.6■□□□□ 0.25
SNX2-204ENST00000506847 CACNB1Q02641 598 aaPredicted RBP16.6■□□□□ 0.25
SNX2-204ENST00000506847 CAPN15O75808 1086 aa16.47■□□□□ 0.23
SNX2-204ENST00000506847 SPINK5Q9NQ38 1064 aaPredicted RBP16.44■□□□□ 0.22
SNX2-204ENST00000506847 ZNF219Q9P2Y4 722 aaPredicted RBP16.44■□□□□ 0.22
SNX2-204ENST00000506847 TRHP20396 242 aaPredicted RBP16.35■□□□□ 0.21
SNX2-204ENST00000506847 ATF5Q9Y2D1 282 aaPredicted RBP16.33■□□□□ 0.2
SNX2-204ENST00000506847 DSG3P32926 999 aa16.16■□□□□ 0.18
SNX2-204ENST00000506847 ABCB7O75027 752 aa16.08■□□□□ 0.16
SNX2-204ENST00000506847 POLA2Q14181 598 aa16.08■□□□□ 0.16
SNX2-204ENST00000506847 ZBTB12Q9Y330 459 aaPredicted RBP15.96■□□□□ 0.15
SNX2-204ENST00000506847 FBLN2P98095 1184 aa15.84■□□□□ 0.13
SNX2-204ENST00000506847 MKRN4PQ13434 485 aaPredicted RBP15.65■□□□□ 0.1
SNX2-204ENST00000506847 OSCARQ8IYS5 282 aa15.53■□□□□ 0.08
SNX2-204ENST00000506847 RBM42Q9BTD8 480 aaKnown RBP15.52■□□□□ 0.08
SNX2-204ENST00000506847 SPDYE2BA6NHP3 402 aa15.46■□□□□ 0.07
SNX2-204ENST00000506847 SPDYE6P0CI01 402 aa15.46■□□□□ 0.07
SNX2-204ENST00000506847 SPDYE2Q495Y8 402 aa15.46■□□□□ 0.07
SNX2-204ENST00000506847 SPDYE4A6NLX3 237 aa15.38■□□□□ 0.05
SNX2-204ENST00000506847 ZNF692Q9BU19 519 aaPredicted RBP15.36■□□□□ 0.05
SNX2-204ENST00000506847 FKBP8Q14318 412 aa15.34■□□□□ 0.05
SNX2-204ENST00000506847 AKT1S1Q96B36 256 aa15.28■□□□□ 0.04
SNX2-204ENST00000506847 SSUH2Q9Y2M2 353 aa15.28■□□□□ 0.04
SNX2-204ENST00000506847 PABPN1Q86U42 306 aaKnown RBP eCLIP15.13■□□□□ 0.01
SNX2-204ENST00000506847 PROM2Q8N271 834 aa15.1■□□□□ 0.01
SNX2-204ENST00000506847 REM2Q8IYK8 340 aaPredicted RBP15.07■□□□□ 0
SNX2-204ENST00000506847 SPDYE1Q8NFV5 336 aaPredicted RBP15.02■□□□□ -0
SNX2-204ENST00000506847 STAG3Q9UJ98 1225 aa14.98□□□□□ -0.01
SNX2-204ENST00000506847 FBXO3Q9UK99 471 aa14.92□□□□□ -0.02
SNX2-204ENST00000506847 PITPNM1O00562 1244 aa14.89□□□□□ -0.03
SNX2-204ENST00000506847 CLEC11AQ9Y240 323 aa14.89□□□□□ -0.03
SNX2-204ENST00000506847 CHRDL2Q6WN34 429 aa14.8□□□□□ -0.04
SNX2-204ENST00000506847 PRR29P0C7W0 189 aa14.79□□□□□ -0.04
SNX2-204ENST00000506847 POTEHQ6S545 545 aa14.75□□□□□ -0.05
SNX2-204ENST00000506847 PLEKHG5O94827 1062 aa14.65□□□□□ -0.06
SNX2-204ENST00000506847 VASPP50552 380 aaPredicted RBP14.63□□□□□ -0.07
SNX2-204ENST00000506847 FXR2P51116 673 aaKnown RBP eCLIP14.63□□□□□ -0.07
SNX2-204ENST00000506847 MIER1Q8N108 512 aa14.6□□□□□ -0.07
SNX2-204ENST00000506847 PLCD3Q8N3E9 789 aa14.59□□□□□ -0.07
SNX2-204ENST00000506847 PIP4P2Q8N4L2 257 aa14.57□□□□□ -0.08
SNX2-204ENST00000506847 PRKAR2AP13861 404 aaKnown RBP14.53□□□□□ -0.08
SNX2-204ENST00000506847 CREBZFQ9NS37 354 aa14.53□□□□□ -0.08
SNX2-204ENST00000506847 ZBTB47Q9UFB7 747 aaPredicted RBP14.53□□□□□ -0.08
SNX2-204ENST00000506847 CHADLQ6NUI6 762 aa14.46□□□□□ -0.09
SNX2-204ENST00000506847 NPM1P06748 294 aaKnown RBP eCLIP14.41□□□□□ -0.1
SNX2-204ENST00000506847 KLHL34Q8N239 644 aa14.41□□□□□ -0.1
SNX2-204ENST00000506847 FARP1Q9Y4F1 1045 aaPredicted RBP14.4□□□□□ -0.1
SNX2-204ENST00000506847 IFNLR1Q8IU57 520 aaPredicted RBP14.37□□□□□ -0.11
SNX2-204ENST00000506847 MNX1P50219 401 aaPredicted RBP14.35□□□□□ -0.11
SNX2-204ENST00000506847 SPOCK2Q92563 424 aa14.29□□□□□ -0.12
SNX2-204ENST00000506847 PAK3O75914 559 aaPredicted RBP14.19□□□□□ -0.14
SNX2-204ENST00000506847 NUBP1P53384 320 aa14.18□□□□□ -0.14
SNX2-204ENST00000506847 FAM212AQ96EL1 285 aa14.16□□□□□ -0.14
SNX2-204ENST00000506847 HAX1O00165 279 aa14.15□□□□□ -0.14
SNX2-204ENST00000506847 C19orf67A6NJJ6 358 aa14.13□□□□□ -0.15
SNX2-204ENST00000506847 CD44P16070 742 aaKnown RBP14.13□□□□□ -0.15
SNX2-204ENST00000506847 GSE1Q14687 1217 aa14.12□□□□□ -0.15
SNX2-204ENST00000506847 RASEFQ8IZ41 740 aa14.11□□□□□ -0.15
SNX2-204ENST00000506847 DCAF8Q5TAQ9 597 aa14.08□□□□□ -0.16
SNX2-204ENST00000506847 TSPYL2Q9H2G4 693 aaPredicted RBP14.07□□□□□ -0.16
SNX2-204ENST00000506847 CIZ1Q9ULV3 898 aaPredicted RBP14.05□□□□□ -0.16
SNX2-204ENST00000506847 ZRANB1Q9UGI0 708 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms