RNA–Protein interactions for RNA: ENST00000506556.1

THUMPD3P1-201, Transcript of THUMP domain containing 3 pseudogene 1, humanhuman

BASIC

Gene THUMPD3P1, Length 1,480 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3P1-201ENST00000506556 AEBP2Q6ZN18 517 aaPredicted RBP17.03■□□□□ 0.32
THUMPD3P1-201ENST00000506556 CHIC1Q5VXU3 224 aa16.97■□□□□ 0.31
THUMPD3P1-201ENST00000506556 PHF23Q9BUL5 403 aaPredicted RBP14.89□□□□□ -0.03
THUMPD3P1-201ENST00000506556 SENP3Q9H4L4 574 aaPredicted RBP14.53□□□□□ -0.08
THUMPD3P1-201ENST00000506556 PLPPR3Q6T4P5 718 aa13.93□□□□□ -0.18
THUMPD3P1-201ENST00000506556 FOXD1Q16676 465 aa13.36□□□□□ -0.27
THUMPD3P1-201ENST00000506556 ADRA2BP18089 450 aa13.05□□□□□ -0.32
THUMPD3P1-201ENST00000506556 PPP6R1Q9UPN7 881 aa13.03□□□□□ -0.32
THUMPD3P1-201ENST00000506556 PIAS4Q8N2W9 510 aaPredicted RBP12.72□□□□□ -0.37
THUMPD3P1-201ENST00000506556 MSH5O43196 834 aa12.32□□□□□ -0.44
THUMPD3P1-201ENST00000506556 POTEDQ86YR6 584 aa12.29□□□□□ -0.44
THUMPD3P1-201ENST00000506556 PPP4R3CPQ6ZMV5 832 aa12.27□□□□□ -0.44
THUMPD3P1-201ENST00000506556 KCNA4P22459 653 aa12.25□□□□□ -0.45
THUMPD3P1-201ENST00000506556 NCBP3Q53F19 620 aaKnown RBP12.1□□□□□ -0.47
THUMPD3P1-201ENST00000506556 SCAF1Q9H7N4 1312 aaKnown RBP12.07□□□□□ -0.48
THUMPD3P1-201ENST00000506556 CNKSR2Q8WXI2 1034 aa11.91□□□□□ -0.5
THUMPD3P1-201ENST00000506556 NPM3O75607 178 aaKnown RBP11.83□□□□□ -0.52
THUMPD3P1-201ENST00000506556 SLC4A1APQ9BWU0 796 aaKnown RBP11.76□□□□□ -0.53
THUMPD3P1-201ENST00000506556 MAPK8IP2Q13387 824 aaPredicted RBP11.74□□□□□ -0.53
THUMPD3P1-201ENST00000506556 EHMT2Q96KQ7 1210 aa11.68□□□□□ -0.54
THUMPD3P1-201ENST00000506556 RNF216Q9NWF9 866 aaPredicted RBP11.61□□□□□ -0.55
THUMPD3P1-201ENST00000506556 DMRT2Q9Y5R5 561 aa11.61□□□□□ -0.55
THUMPD3P1-201ENST00000506556 DNAJC5BQ9UF47 199 aa11.51□□□□□ -0.57
THUMPD3P1-201ENST00000506556 HOXD11P31277 338 aaPredicted RBP11.47□□□□□ -0.57
THUMPD3P1-201ENST00000506556 CSRNP3Q8WYN3 585 aa11.42□□□□□ -0.58
THUMPD3P1-201ENST00000506556 FOXD4L1Q9NU39 408 aa11.26□□□□□ -0.61
THUMPD3P1-201ENST00000506556 ZBTB22O15209 634 aa11.24□□□□□ -0.61
THUMPD3P1-201ENST00000506556 DCAF8L1A6NGE4 600 aa11.08□□□□□ -0.64
THUMPD3P1-201ENST00000506556 SLC4A2P04920 1241 aa11.08□□□□□ -0.64
THUMPD3P1-201ENST00000506556 MYCNP04198 464 aaPredicted RBP10.99□□□□□ -0.65
THUMPD3P1-201ENST00000506556 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.94□□□□□ -0.66
THUMPD3P1-201ENST00000506556 ATXN8OSP0DMR3 200 aa10.87□□□□□ -0.67
THUMPD3P1-201ENST00000506556 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.83□□□□□ -0.68
THUMPD3P1-201ENST00000506556 HNRNPUL2Q1KMD3 747 aaKnown RBP10.83□□□□□ -0.68
THUMPD3P1-201ENST00000506556 SAMD1Q6SPF0 538 aaPredicted RBP10.77□□□□□ -0.69
THUMPD3P1-201ENST00000506556 U3KPZ7 1027 aaPredicted RBP10.75□□□□□ -0.69
THUMPD3P1-201ENST00000506556 APLP2Q06481 763 aa10.68□□□□□ -0.7
THUMPD3P1-201ENST00000506556 ATF5Q9Y2D1 282 aaPredicted RBP10.57□□□□□ -0.72
THUMPD3P1-201ENST00000506556 RNF39Q9H2S5 420 aa10.53□□□□□ -0.72
THUMPD3P1-201ENST00000506556 C1QBPQ07021 282 aaKnown RBP10.47□□□□□ -0.73
THUMPD3P1-201ENST00000506556 ZNF219Q9P2Y4 722 aaPredicted RBP10.44□□□□□ -0.74
THUMPD3P1-201ENST00000506556 CAPN15O75808 1086 aa10.36□□□□□ -0.75
THUMPD3P1-201ENST00000506556 TRHP20396 242 aaPredicted RBP10.36□□□□□ -0.75
THUMPD3P1-201ENST00000506556 SPINK5Q9NQ38 1064 aaPredicted RBP10.36□□□□□ -0.75
THUMPD3P1-201ENST00000506556 FKBP8Q14318 412 aa10.35□□□□□ -0.75
THUMPD3P1-201ENST00000506556 POLA2Q14181 598 aa10.24□□□□□ -0.77
THUMPD3P1-201ENST00000506556 FBLN2P98095 1184 aa10.23□□□□□ -0.77
THUMPD3P1-201ENST00000506556 ZBTB12Q9Y330 459 aaPredicted RBP10.19□□□□□ -0.78
THUMPD3P1-201ENST00000506556 ABCB7O75027 752 aa10.14□□□□□ -0.79
THUMPD3P1-201ENST00000506556 MKRN4PQ13434 485 aaPredicted RBP10.14□□□□□ -0.79
THUMPD3P1-201ENST00000506556 SPDYE4A6NLX3 237 aa10.1□□□□□ -0.79
THUMPD3P1-201ENST00000506556 DSG3P32926 999 aa10.1□□□□□ -0.79
THUMPD3P1-201ENST00000506556 CACNB1Q02641 598 aaPredicted RBP10.08□□□□□ -0.8
THUMPD3P1-201ENST00000506556 FBXO3Q9UK99 471 aa9.99□□□□□ -0.81
THUMPD3P1-201ENST00000506556 PROM2Q8N271 834 aa9.96□□□□□ -0.82
THUMPD3P1-201ENST00000506556 AMER1Q5JTC6 1135 aaPredicted RBP9.95□□□□□ -0.82
THUMPD3P1-201ENST00000506556 SPDYE2BA6NHP3 402 aa9.9□□□□□ -0.83
THUMPD3P1-201ENST00000506556 SPDYE6P0CI01 402 aa9.9□□□□□ -0.83
THUMPD3P1-201ENST00000506556 SPDYE2Q495Y8 402 aa9.9□□□□□ -0.83
THUMPD3P1-201ENST00000506556 OSCARQ8IYS5 282 aa9.88□□□□□ -0.83
THUMPD3P1-201ENST00000506556 ZNF692Q9BU19 519 aaPredicted RBP9.88□□□□□ -0.83
THUMPD3P1-201ENST00000506556 RTN4Q9NQC3 1192 aaKnown RBP9.83□□□□□ -0.84
THUMPD3P1-201ENST00000506556 SSUH2Q9Y2M2 353 aa9.81□□□□□ -0.84
THUMPD3P1-201ENST00000506556 VASPP50552 380 aaPredicted RBP9.78□□□□□ -0.84
THUMPD3P1-201ENST00000506556 PABPN1Q86U42 306 aaKnown RBP eCLIP9.73□□□□□ -0.85
THUMPD3P1-201ENST00000506556 STAG3Q9UJ98 1225 aa9.73□□□□□ -0.85
THUMPD3P1-201ENST00000506556 RBM42Q9BTD8 480 aaKnown RBP9.71□□□□□ -0.86
THUMPD3P1-201ENST00000506556 IFNLR1Q8IU57 520 aaPredicted RBP9.62□□□□□ -0.87
THUMPD3P1-201ENST00000506556 AKT1S1Q96B36 256 aa9.61□□□□□ -0.87
THUMPD3P1-201ENST00000506556 PLCD3Q8N3E9 789 aa9.59□□□□□ -0.87
THUMPD3P1-201ENST00000506556 PLEKHG5O94827 1062 aa9.58□□□□□ -0.88
THUMPD3P1-201ENST00000506556 KLHL34Q8N239 644 aa9.57□□□□□ -0.88
THUMPD3P1-201ENST00000506556 MIER1Q8N108 512 aa9.55□□□□□ -0.88
THUMPD3P1-201ENST00000506556 SPDYE1Q8NFV5 336 aaPredicted RBP9.55□□□□□ -0.88
THUMPD3P1-201ENST00000506556 ZBTB47Q9UFB7 747 aaPredicted RBP9.53□□□□□ -0.88
THUMPD3P1-201ENST00000506556 SPOCK2Q92563 424 aa9.53□□□□□ -0.88
THUMPD3P1-201ENST00000506556 REM2Q8IYK8 340 aaPredicted RBP9.47□□□□□ -0.89
THUMPD3P1-201ENST00000506556 CLEC11AQ9Y240 323 aa9.46□□□□□ -0.9
THUMPD3P1-201ENST00000506556 PRR29P0C7W0 189 aa9.43□□□□□ -0.9
THUMPD3P1-201ENST00000506556 PKD2Q13563 968 aa9.4□□□□□ -0.9
THUMPD3P1-201ENST00000506556 SLC24A1O60721 1099 aa9.36□□□□□ -0.91
THUMPD3P1-201ENST00000506556 PITPNM1O00562 1244 aa9.35□□□□□ -0.91
THUMPD3P1-201ENST00000506556 ECM2O94769 699 aaPredicted RBP9.34□□□□□ -0.91
THUMPD3P1-201ENST00000506556 POTEHQ6S545 545 aa9.34□□□□□ -0.91
THUMPD3P1-201ENST00000506556 DCAF8L2P0C7V8 631 aa9.34□□□□□ -0.91
THUMPD3P1-201ENST00000506556 TRIM41Q8WV44 630 aa9.32□□□□□ -0.92
THUMPD3P1-201ENST00000506556 CREBZFQ9NS37 354 aa9.32□□□□□ -0.92
THUMPD3P1-201ENST00000506556 CIZ1Q9ULV3 898 aaPredicted RBP9.32□□□□□ -0.92
THUMPD3P1-201ENST00000506556 GSE1Q14687 1217 aa9.3□□□□□ -0.92
THUMPD3P1-201ENST00000506556 NPM1P06748 294 aaKnown RBP eCLIP9.26□□□□□ -0.93
THUMPD3P1-201ENST00000506556 NUBP1P53384 320 aa9.26□□□□□ -0.93
THUMPD3P1-201ENST00000506556 MNX1P50219 401 aaPredicted RBP9.24□□□□□ -0.93
THUMPD3P1-201ENST00000506556 FAM212AQ96EL1 285 aa9.24□□□□□ -0.93
THUMPD3P1-201ENST00000506556 DCAF8Q5TAQ9 597 aa9.22□□□□□ -0.93
THUMPD3P1-201ENST00000506556 RGL2O15211 777 aa9.2□□□□□ -0.94
THUMPD3P1-201ENST00000506556 PLCB2Q00722 1185 aa9.16□□□□□ -0.94
THUMPD3P1-201ENST00000506556 TAOK2Q9UL54 1235 aa9.16□□□□□ -0.94
THUMPD3P1-201ENST00000506556 FXR2P51116 673 aaKnown RBP eCLIP9.15□□□□□ -0.95
THUMPD3P1-201ENST00000506556 CHADLQ6NUI6 762 aa9.15□□□□□ -0.95
THUMPD3P1-201ENST00000506556 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms