RNA–Protein interactions for RNA: ENST00000506410.1

CENPC-202, Transcript of centromere protein C, humanhuman

TSL 2

Gene CENPC, Length 692 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPC-202ENST00000506410 AEBP2Q6ZN18 517 aaPredicted RBP19.95■□□□□ 0.78
CENPC-202ENST00000506410 CHIC1Q5VXU3 224 aa19.43■□□□□ 0.7
CENPC-202ENST00000506410 PHF23Q9BUL5 403 aaPredicted RBP17.02■□□□□ 0.32
CENPC-202ENST00000506410 SENP3Q9H4L4 574 aaPredicted RBP17.02■□□□□ 0.32
CENPC-202ENST00000506410 FOXD1Q16676 465 aa15.74■□□□□ 0.11
CENPC-202ENST00000506410 PLPPR3Q6T4P5 718 aa15.74■□□□□ 0.11
CENPC-202ENST00000506410 PPP6R1Q9UPN7 881 aa15.03■□□□□ -0
CENPC-202ENST00000506410 ADRA2BP18089 450 aa14.98□□□□□ -0.01
CENPC-202ENST00000506410 POTEDQ86YR6 584 aa14.88□□□□□ -0.03
CENPC-202ENST00000506410 PIAS4Q8N2W9 510 aaPredicted RBP14.81□□□□□ -0.04
CENPC-202ENST00000506410 MSH5O43196 834 aa14.72□□□□□ -0.05
CENPC-202ENST00000506410 SCAF1Q9H7N4 1312 aaKnown RBP13.82□□□□□ -0.2
CENPC-202ENST00000506410 PPP4R3CPQ6ZMV5 832 aa13.81□□□□□ -0.2
CENPC-202ENST00000506410 MAPK8IP2Q13387 824 aaPredicted RBP13.61□□□□□ -0.23
CENPC-202ENST00000506410 DMRT2Q9Y5R5 561 aa13.56□□□□□ -0.24
CENPC-202ENST00000506410 CNKSR2Q8WXI2 1034 aa13.49□□□□□ -0.25
CENPC-202ENST00000506410 NCBP3Q53F19 620 aaKnown RBP13.46□□□□□ -0.25
CENPC-202ENST00000506410 KCNA4P22459 653 aa13.33□□□□□ -0.28
CENPC-202ENST00000506410 RNF216Q9NWF9 866 aaPredicted RBP13.28□□□□□ -0.28
CENPC-202ENST00000506410 HOXD11P31277 338 aaPredicted RBP13.26□□□□□ -0.29
CENPC-202ENST00000506410 NPM3O75607 178 aaKnown RBP13.22□□□□□ -0.29
CENPC-202ENST00000506410 DNAJC5BQ9UF47 199 aa13.04□□□□□ -0.32
CENPC-202ENST00000506410 DCAF8L1A6NGE4 600 aa12.84□□□□□ -0.35
CENPC-202ENST00000506410 CACNB1Q02641 598 aaPredicted RBP12.81□□□□□ -0.36
CENPC-202ENST00000506410 SLC4A1APQ9BWU0 796 aaKnown RBP12.69□□□□□ -0.38
CENPC-202ENST00000506410 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.54□□□□□ -0.4
CENPC-202ENST00000506410 RNF39Q9H2S5 420 aa12.54□□□□□ -0.4
CENPC-202ENST00000506410 SLC4A2P04920 1241 aa12.51□□□□□ -0.41
CENPC-202ENST00000506410 C1QBPQ07021 282 aaKnown RBP12.38□□□□□ -0.43
CENPC-202ENST00000506410 U3KPZ7 1027 aaPredicted RBP12.37□□□□□ -0.43
CENPC-202ENST00000506410 FOXD4L1Q9NU39 408 aa12.36□□□□□ -0.43
CENPC-202ENST00000506410 ZBTB22O15209 634 aa12.26□□□□□ -0.45
CENPC-202ENST00000506410 MYCNP04198 464 aaPredicted RBP12.26□□□□□ -0.45
CENPC-202ENST00000506410 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.24□□□□□ -0.45
CENPC-202ENST00000506410 HNRNPUL2Q1KMD3 747 aaKnown RBP12.24□□□□□ -0.45
CENPC-202ENST00000506410 SAMD1Q6SPF0 538 aaPredicted RBP12.17□□□□□ -0.46
CENPC-202ENST00000506410 APLP2Q06481 763 aa12.15□□□□□ -0.46
CENPC-202ENST00000506410 CSRNP3Q8WYN3 585 aa12.11□□□□□ -0.47
CENPC-202ENST00000506410 EHMT2Q96KQ7 1210 aa12.11□□□□□ -0.47
CENPC-202ENST00000506410 ATXN8OSP0DMR3 200 aa12□□□□□ -0.49
CENPC-202ENST00000506410 SPINK5Q9NQ38 1064 aaPredicted RBP12□□□□□ -0.49
CENPC-202ENST00000506410 ZNF219Q9P2Y4 722 aaPredicted RBP11.96□□□□□ -0.49
CENPC-202ENST00000506410 CAPN15O75808 1086 aa11.95□□□□□ -0.5
CENPC-202ENST00000506410 TRHP20396 242 aaPredicted RBP11.85□□□□□ -0.51
CENPC-202ENST00000506410 ATF5Q9Y2D1 282 aaPredicted RBP11.85□□□□□ -0.51
CENPC-202ENST00000506410 DSG3P32926 999 aa11.84□□□□□ -0.51
CENPC-202ENST00000506410 ABCB7O75027 752 aa11.68□□□□□ -0.54
CENPC-202ENST00000506410 POLA2Q14181 598 aa11.67□□□□□ -0.54
CENPC-202ENST00000506410 POTEHQ6S545 545 aa11.61□□□□□ -0.55
CENPC-202ENST00000506410 ZBTB12Q9Y330 459 aaPredicted RBP11.58□□□□□ -0.56
CENPC-202ENST00000506410 FBLN2P98095 1184 aa11.42□□□□□ -0.58
CENPC-202ENST00000506410 MKRN4PQ13434 485 aaPredicted RBP11.37□□□□□ -0.59
CENPC-202ENST00000506410 RBM42Q9BTD8 480 aaKnown RBP11.34□□□□□ -0.59
CENPC-202ENST00000506410 OSCARQ8IYS5 282 aa11.28□□□□□ -0.6
CENPC-202ENST00000506410 SPDYE2BA6NHP3 402 aa11.24□□□□□ -0.61
CENPC-202ENST00000506410 SPDYE6P0CI01 402 aa11.24□□□□□ -0.61
CENPC-202ENST00000506410 SPDYE2Q495Y8 402 aa11.24□□□□□ -0.61
CENPC-202ENST00000506410 AKT1S1Q96B36 256 aa11.16□□□□□ -0.62
CENPC-202ENST00000506410 SSUH2Q9Y2M2 353 aa11.14□□□□□ -0.63
CENPC-202ENST00000506410 ZNF692Q9BU19 519 aaPredicted RBP11.1□□□□□ -0.63
CENPC-202ENST00000506410 SPDYE4A6NLX3 237 aa11.06□□□□□ -0.64
CENPC-202ENST00000506410 REM2Q8IYK8 340 aaPredicted RBP11.01□□□□□ -0.65
CENPC-202ENST00000506410 CHRDL2Q6WN34 429 aa11□□□□□ -0.65
CENPC-202ENST00000506410 PROM2Q8N271 834 aa10.96□□□□□ -0.65
CENPC-202ENST00000506410 PABPN1Q86U42 306 aaKnown RBP eCLIP10.95□□□□□ -0.66
CENPC-202ENST00000506410 FKBP8Q14318 412 aa10.92□□□□□ -0.66
CENPC-202ENST00000506410 SPDYE1Q8NFV5 336 aaPredicted RBP10.9□□□□□ -0.66
CENPC-202ENST00000506410 PITPNM1O00562 1244 aa10.87□□□□□ -0.67
CENPC-202ENST00000506410 STAG3Q9UJ98 1225 aa10.82□□□□□ -0.68
CENPC-202ENST00000506410 CLEC11AQ9Y240 323 aa10.76□□□□□ -0.69
CENPC-202ENST00000506410 FXR2P51116 673 aaKnown RBP eCLIP10.74□□□□□ -0.69
CENPC-202ENST00000506410 SP7Q8TDD2 431 aaPredicted RBP10.74□□□□□ -0.69
CENPC-202ENST00000506410 PRR29P0C7W0 189 aa10.7□□□□□ -0.7
CENPC-202ENST00000506410 PIP4P2Q8N4L2 257 aa10.69□□□□□ -0.7
CENPC-202ENST00000506410 FBXO3Q9UK99 471 aa10.66□□□□□ -0.7
CENPC-202ENST00000506410 PRKAR2AP13861 404 aaKnown RBP10.59□□□□□ -0.71
CENPC-202ENST00000506410 CREBZFQ9NS37 354 aa10.56□□□□□ -0.72
CENPC-202ENST00000506410 HAX1O00165 279 aa10.55□□□□□ -0.72
CENPC-202ENST00000506410 CHADLQ6NUI6 762 aa10.51□□□□□ -0.73
CENPC-202ENST00000506410 PLEKHG5O94827 1062 aa10.48□□□□□ -0.73
CENPC-202ENST00000506410 FARP1Q9Y4F1 1045 aaPredicted RBP10.48□□□□□ -0.73
CENPC-202ENST00000506410 VASPP50552 380 aaPredicted RBP10.47□□□□□ -0.73
CENPC-202ENST00000506410 MNX1P50219 401 aaPredicted RBP10.46□□□□□ -0.73
CENPC-202ENST00000506410 MIER1Q8N108 512 aa10.46□□□□□ -0.73
CENPC-202ENST00000506410 PLCD3Q8N3E9 789 aa10.44□□□□□ -0.74
CENPC-202ENST00000506410 ZBTB47Q9UFB7 747 aaPredicted RBP10.43□□□□□ -0.74
CENPC-202ENST00000506410 NPM1P06748 294 aaKnown RBP eCLIP10.4□□□□□ -0.74
CENPC-202ENST00000506410 EVX2Q03828 476 aa10.4□□□□□ -0.74
CENPC-202ENST00000506410 C19orf67A6NJJ6 358 aa10.37□□□□□ -0.75
CENPC-202ENST00000506410 IFNLR1Q8IU57 520 aaPredicted RBP10.3□□□□□ -0.76
CENPC-202ENST00000506410 CD44P16070 742 aaKnown RBP10.28□□□□□ -0.76
CENPC-202ENST00000506410 NUBP1P53384 320 aa10.26□□□□□ -0.77
CENPC-202ENST00000506410 KLHL34Q8N239 644 aa10.25□□□□□ -0.77
CENPC-202ENST00000506410 PAK3O75914 559 aaPredicted RBP10.24□□□□□ -0.77
CENPC-202ENST00000506410 SPOCK2Q92563 424 aa10.22□□□□□ -0.77
CENPC-202ENST00000506410 RASEFQ8IZ41 740 aa10.21□□□□□ -0.77
CENPC-202ENST00000506410 CLCN6P51797 869 aa10.2□□□□□ -0.78
CENPC-202ENST00000506410 ZNF579Q8NAF0 562 aaKnown RBP10.2□□□□□ -0.78
CENPC-202ENST00000506410 FAM212AQ96EL1 285 aa10.19□□□□□ -0.78
CENPC-202ENST00000506410 ZRANB1Q9UGI0 708 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms