RNA–Protein interactions for RNA: ENST00000506351.6

TNPO1-204, Transcript of transportin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNPO1, Length 3,028 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-204ENST00000506351 NISCHQ9Y2I1 1504 aa16.15■□□□□ 0.18
TNPO1-204ENST00000506351 CCDC180Q9P1Z9 1646 aa14.06□□□□□ -0.16
TNPO1-204ENST00000506351 ZCCHC6Q5VYS8 1495 aaKnown RBP13.64□□□□□ -0.23
TNPO1-204ENST00000506351 DCAF1Q9Y4B6 1507 aa13.36□□□□□ -0.27
TNPO1-204ENST00000506351 SHROOM4Q9ULL8 1493 aa13.31□□□□□ -0.28
TNPO1-204ENST00000506351 DCAF8L2P0C7V8 631 aa13.15□□□□□ -0.3
TNPO1-204ENST00000506351 MYO15BQ96JP2 1530 aa13.1□□□□□ -0.31
TNPO1-204ENST00000506351 ABCC9O60706 1549 aa13.01□□□□□ -0.33
TNPO1-204ENST00000506351 NACADO15069 1562 aa12.97□□□□□ -0.33
TNPO1-204ENST00000506351 SCRIBQ14160 1630 aa12.95□□□□□ -0.34
TNPO1-204ENST00000506351 SUPT5HO00267 1087 aaKnown RBP12.86□□□□□ -0.35
TNPO1-204ENST00000506351 RB1CC1Q8TDY2 1594 aa12.82□□□□□ -0.36
TNPO1-204ENST00000506351 UNC13AQ9UPW8 1703 aa12.72□□□□□ -0.37
TNPO1-204ENST00000506351 RSF1Q96T23 1441 aaPredicted RBP12.59□□□□□ -0.39
TNPO1-204ENST00000506351 CECR2Q9BXF3 1484 aa12.53□□□□□ -0.4
TNPO1-204ENST00000506351 MROH2BQ7Z745 1585 aa12.5□□□□□ -0.41
TNPO1-204ENST00000506351 WIZO95785 1651 aa12.47□□□□□ -0.41
TNPO1-204ENST00000506351 BICRAQ9NZM4 1560 aa12.46□□□□□ -0.41
TNPO1-204ENST00000506351 BAZ1AQ9NRL2 1556 aaPredicted RBP12.46□□□□□ -0.41
TNPO1-204ENST00000506351 CHIC1Q5VXU3 224 aa12.44□□□□□ -0.42
TNPO1-204ENST00000506351 SMARCA4P51532 1647 aa12.42□□□□□ -0.42
TNPO1-204ENST00000506351 TOP2AP11388 1531 aaKnown RBP12.31□□□□□ -0.44
TNPO1-204ENST00000506351 EIF4G1Q04637 1599 aaKnown RBP12.26□□□□□ -0.45
TNPO1-204ENST00000506351 PABPN1Q86U42 306 aaKnown RBP eCLIP12.25□□□□□ -0.45
TNPO1-204ENST00000506351 PEG3Q9GZU2 1588 aa12.24□□□□□ -0.45
TNPO1-204ENST00000506351 SMARCA2P51531 1590 aa12.21□□□□□ -0.45
TNPO1-204ENST00000506351 CCDC88BA6NC98 1476 aa12.14□□□□□ -0.47
TNPO1-204ENST00000506351 ATAD2BQ9ULI0 1458 aa12.09□□□□□ -0.47
TNPO1-204ENST00000506351 TRIM41Q8WV44 630 aa12.06□□□□□ -0.48
TNPO1-204ENST00000506351 BAZ1BQ9UIG0 1483 aaKnown RBP12.05□□□□□ -0.48
TNPO1-204ENST00000506351 ABCC8Q09428 1581 aa12.01□□□□□ -0.49
TNPO1-204ENST00000506351 HMGXB3Q12766 1538 aa11.99□□□□□ -0.49
TNPO1-204ENST00000506351 LOC105371045A0A1W2PR82 267 aa11.97□□□□□ -0.49
TNPO1-204ENST00000506351 NCAPD3P42695 1498 aa11.92□□□□□ -0.5
TNPO1-204ENST00000506351 PRDM2Q13029 1718 aa11.88□□□□□ -0.51
TNPO1-204ENST00000506351 FAM9AQ8IZU1 332 aaPredicted RBP11.87□□□□□ -0.51
TNPO1-204ENST00000506351 SYNJ1O43426 1573 aa11.86□□□□□ -0.51
TNPO1-204ENST00000506351 WRNQ14191 1432 aaPredicted RBP eCLIP11.84□□□□□ -0.51
TNPO1-204ENST00000506351 CC2D2AQ9P2K1 1620 aa11.83□□□□□ -0.52
TNPO1-204ENST00000506351 BIVM-ERCC5R4GMW8 1640 aa11.81□□□□□ -0.52
TNPO1-204ENST00000506351 TOP2BQ02880 1626 aa11.79□□□□□ -0.52
TNPO1-204ENST00000506351 EEA1Q15075 1411 aa11.78□□□□□ -0.52
TNPO1-204ENST00000506351 SOGA1O94964 1423 aa11.77□□□□□ -0.53
TNPO1-204ENST00000506351 CFTRP13569 1480 aa11.74□□□□□ -0.53
TNPO1-204ENST00000506351 RUSC2Q8N2Y8 1516 aa11.74□□□□□ -0.53
TNPO1-204ENST00000506351 EHMT2Q96KQ7 1210 aa11.71□□□□□ -0.54
TNPO1-204ENST00000506351 KIF21BO75037 1637 aa11.7□□□□□ -0.54
TNPO1-204ENST00000506351 CUX1P39880 1505 aa11.69□□□□□ -0.54
TNPO1-204ENST00000506351 GOLGA3Q08378 1498 aa11.66□□□□□ -0.54
TNPO1-204ENST00000506351 PCGF6Q9BYE7 350 aa11.65□□□□□ -0.54
TNPO1-204ENST00000506351 CSRNP3Q8WYN3 585 aa11.64□□□□□ -0.55
TNPO1-204ENST00000506351 TNIKQ9UKE5 1360 aa11.63□□□□□ -0.55
TNPO1-204ENST00000506351 CEP164Q9UPV0 1460 aa11.63□□□□□ -0.55
TNPO1-204ENST00000506351 CADPSQ9ULU8 1353 aa11.62□□□□□ -0.55
TNPO1-204ENST00000506351 CEP162Q5TB80 1403 aa11.62□□□□□ -0.55
TNPO1-204ENST00000506351 TRIM26Q12899 539 aaPredicted RBP11.59□□□□□ -0.55
TNPO1-204ENST00000506351 ERICH3Q5RHP9 1530 aa11.55□□□□□ -0.56
TNPO1-204ENST00000506351 LAMC3Q9Y6N6 1575 aa11.54□□□□□ -0.56
TNPO1-204ENST00000506351 RAPGEF2Q9Y4G8 1499 aa11.54□□□□□ -0.56
TNPO1-204ENST00000506351 FANCD2Q9BXW9 1451 aa11.53□□□□□ -0.56
TNPO1-204ENST00000506351 HRCP23327 699 aa11.52□□□□□ -0.56
TNPO1-204ENST00000506351 DNMBPQ6XZF7 1577 aa11.52□□□□□ -0.57
TNPO1-204ENST00000506351 NESP48681 1621 aa11.51□□□□□ -0.57
TNPO1-204ENST00000506351 UBTFP17480 764 aaKnown RBP11.51□□□□□ -0.57
TNPO1-204ENST00000506351 PRXQ9BXM0 1461 aa11.51□□□□□ -0.57
TNPO1-204ENST00000506351 KIF27Q86VH2 1401 aa11.51□□□□□ -0.57
TNPO1-204ENST00000506351 FGD5Q6ZNL6 1462 aa11.51□□□□□ -0.57
TNPO1-204ENST00000506351 KIF21AQ7Z4S6 1674 aa11.47□□□□□ -0.57
TNPO1-204ENST00000506351 WDR97A6NE52 1622 aa11.46□□□□□ -0.57
TNPO1-204ENST00000506351 TOPBP1Q92547 1522 aa11.46□□□□□ -0.58
TNPO1-204ENST00000506351 CLIP1P30622 1438 aa11.45□□□□□ -0.58
TNPO1-204ENST00000506351 CUX2O14529 1486 aa11.45□□□□□ -0.58
TNPO1-204ENST00000506351 POLA1P09884 1462 aaPredicted RBP11.41□□□□□ -0.58
TNPO1-204ENST00000506351 URB2Q14146 1524 aaKnown RBP11.4□□□□□ -0.58
TNPO1-204ENST00000506351 PPARGC1BQ86YN6 1023 aaKnown RBP11.4□□□□□ -0.58
TNPO1-204ENST00000506351 VPS8Q8N3P4 1428 aa11.4□□□□□ -0.58
TNPO1-204ENST00000506351 ABCA10Q8WWZ4 1543 aa11.4□□□□□ -0.59
TNPO1-204ENST00000506351 CUL7Q14999 1698 aa11.38□□□□□ -0.59
TNPO1-204ENST00000506351 PDS5BQ9NTI5 1447 aa11.37□□□□□ -0.59
TNPO1-204ENST00000506351 ARAP1Q96P48 1450 aa11.37□□□□□ -0.59
TNPO1-204ENST00000506351 RAD54L2Q9Y4B4 1467 aa11.37□□□□□ -0.59
TNPO1-204ENST00000506351 DNAJC5BQ9UF47 199 aa11.36□□□□□ -0.59
TNPO1-204ENST00000506351 IGF1RP08069 1367 aa11.36□□□□□ -0.59
TNPO1-204ENST00000506351 ABCA5Q8WWZ7 1642 aa11.36□□□□□ -0.59
TNPO1-204ENST00000506351 CTTNBP2Q8WZ74 1663 aa11.34□□□□□ -0.59
TNPO1-204ENST00000506351 CARMIL1Q5VZK9 1371 aa11.31□□□□□ -0.6
TNPO1-204ENST00000506351 TARBP1Q13395 1621 aaKnown RBP11.31□□□□□ -0.6
TNPO1-204ENST00000506351 ARHGAP35Q9NRY4 1499 aa11.3□□□□□ -0.6
TNPO1-204ENST00000506351 PBRM1Q86U86 1689 aa11.3□□□□□ -0.6
TNPO1-204ENST00000506351 TTBK1Q5TCY1 1321 aaPredicted RBP11.28□□□□□ -0.6
TNPO1-204ENST00000506351 RANGAP1P46060 587 aaPredicted RBP11.28□□□□□ -0.6
TNPO1-204ENST00000506351 MRC2Q9UBG0 1479 aa11.27□□□□□ -0.61
TNPO1-204ENST00000506351 GAPVD1Q14C86 1478 aa11.24□□□□□ -0.61
TNPO1-204ENST00000506351 ZEB1P37275 1124 aaPredicted RBP11.23□□□□□ -0.61
TNPO1-204ENST00000506351 WDR62O43379 1518 aa11.23□□□□□ -0.61
TNPO1-204ENST00000506351 EFCAB5A4FU69 1503 aa11.22□□□□□ -0.61
TNPO1-204ENST00000506351 CFAP43Q8NDM7 1665 aa11.22□□□□□ -0.61
TNPO1-204ENST00000506351 APLP2Q06481 763 aa11.2□□□□□ -0.62
TNPO1-204ENST00000506351 PCF11O94913 1555 aaKnown RBP11.19□□□□□ -0.62
TNPO1-204ENST00000506351 THOC2Q8NI27 1593 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms