RNA–Protein interactions for RNA: ENST00000506272.5

SNCAIP-208, Transcript of synuclein alpha interacting protein, humanhuman

TSL 4

Gene SNCAIP, Length 586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-208ENST00000506272 AEBP2Q6ZN18 517 aaPredicted RBP19.1■□□□□ 0.65
SNCAIP-208ENST00000506272 CHIC1Q5VXU3 224 aa18.74■□□□□ 0.59
SNCAIP-208ENST00000506272 PHF23Q9BUL5 403 aaPredicted RBP16.51■□□□□ 0.23
SNCAIP-208ENST00000506272 SENP3Q9H4L4 574 aaPredicted RBP16.16■□□□□ 0.18
SNCAIP-208ENST00000506272 PLPPR3Q6T4P5 718 aa15.24■□□□□ 0.03
SNCAIP-208ENST00000506272 FOXD1Q16676 465 aa15.01□□□□□ -0.01
SNCAIP-208ENST00000506272 PPP6R1Q9UPN7 881 aa14.54□□□□□ -0.08
SNCAIP-208ENST00000506272 ADRA2BP18089 450 aa14.53□□□□□ -0.08
SNCAIP-208ENST00000506272 PIAS4Q8N2W9 510 aaPredicted RBP14.17□□□□□ -0.14
SNCAIP-208ENST00000506272 MSH5O43196 834 aa13.78□□□□□ -0.2
SNCAIP-208ENST00000506272 PPP4R3CPQ6ZMV5 832 aa13.46□□□□□ -0.25
SNCAIP-208ENST00000506272 KCNA4P22459 653 aa13.26□□□□□ -0.29
SNCAIP-208ENST00000506272 SCAF1Q9H7N4 1312 aaKnown RBP13.26□□□□□ -0.29
SNCAIP-208ENST00000506272 MAPK8IP2Q13387 824 aaPredicted RBP13.16□□□□□ -0.3
SNCAIP-208ENST00000506272 NCBP3Q53F19 620 aaKnown RBP13.11□□□□□ -0.31
SNCAIP-208ENST00000506272 CNKSR2Q8WXI2 1034 aa13.06□□□□□ -0.32
SNCAIP-208ENST00000506272 NPM3O75607 178 aaKnown RBP12.94□□□□□ -0.34
SNCAIP-208ENST00000506272 DMRT2Q9Y5R5 561 aa12.92□□□□□ -0.34
SNCAIP-208ENST00000506272 NISCHQ9Y2I1 1504 aa12.85□□□□□ -0.35
SNCAIP-208ENST00000506272 RNF216Q9NWF9 866 aaPredicted RBP12.77□□□□□ -0.37
SNCAIP-208ENST00000506272 POTEDQ86YR6 584 aa12.74□□□□□ -0.37
SNCAIP-208ENST00000506272 HOXD11P31277 338 aaPredicted RBP12.7□□□□□ -0.38
SNCAIP-208ENST00000506272 SLC4A1APQ9BWU0 796 aaKnown RBP12.63□□□□□ -0.39
SNCAIP-208ENST00000506272 DNAJC5BQ9UF47 199 aa12.54□□□□□ -0.4
SNCAIP-208ENST00000506272 EHMT2Q96KQ7 1210 aa12.37□□□□□ -0.43
SNCAIP-208ENST00000506272 DCAF8L1A6NGE4 600 aa12.36□□□□□ -0.43
SNCAIP-208ENST00000506272 ZBTB22O15209 634 aa12.21□□□□□ -0.45
SNCAIP-208ENST00000506272 SLC4A2P04920 1241 aa12.21□□□□□ -0.45
SNCAIP-208ENST00000506272 CSRNP3Q8WYN3 585 aa12.21□□□□□ -0.45
SNCAIP-208ENST00000506272 FOXD4L1Q9NU39 408 aa12.16□□□□□ -0.46
SNCAIP-208ENST00000506272 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.1□□□□□ -0.47
SNCAIP-208ENST00000506272 MYCNP04198 464 aaPredicted RBP11.94□□□□□ -0.5
SNCAIP-208ENST00000506272 U3KPZ7 1027 aaPredicted RBP11.92□□□□□ -0.5
SNCAIP-208ENST00000506272 RNF39Q9H2S5 420 aa11.83□□□□□ -0.52
SNCAIP-208ENST00000506272 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.77□□□□□ -0.53
SNCAIP-208ENST00000506272 HNRNPUL2Q1KMD3 747 aaKnown RBP11.77□□□□□ -0.53
SNCAIP-208ENST00000506272 SAMD1Q6SPF0 538 aaPredicted RBP11.74□□□□□ -0.53
SNCAIP-208ENST00000506272 ATXN8OSP0DMR3 200 aa11.73□□□□□ -0.53
SNCAIP-208ENST00000506272 C1QBPQ07021 282 aaKnown RBP11.69□□□□□ -0.54
SNCAIP-208ENST00000506272 ATF5Q9Y2D1 282 aaPredicted RBP11.65□□□□□ -0.54
SNCAIP-208ENST00000506272 APLP2Q06481 763 aa11.62□□□□□ -0.55
SNCAIP-208ENST00000506272 SPINK5Q9NQ38 1064 aaPredicted RBP11.57□□□□□ -0.56
SNCAIP-208ENST00000506272 CCDC180Q9P1Z9 1646 aa11.51□□□□□ -0.57
SNCAIP-208ENST00000506272 CAPN15O75808 1086 aa11.5□□□□□ -0.57
SNCAIP-208ENST00000506272 TRHP20396 242 aaPredicted RBP11.47□□□□□ -0.57
SNCAIP-208ENST00000506272 ZNF219Q9P2Y4 722 aaPredicted RBP11.46□□□□□ -0.57
SNCAIP-208ENST00000506272 CACNB1Q02641 598 aaPredicted RBP11.45□□□□□ -0.58
SNCAIP-208ENST00000506272 POLA2Q14181 598 aa11.31□□□□□ -0.6
SNCAIP-208ENST00000506272 ABCB7O75027 752 aa11.3□□□□□ -0.6
SNCAIP-208ENST00000506272 DSG3P32926 999 aa11.3□□□□□ -0.6
SNCAIP-208ENST00000506272 ABCC9O60706 1549 aa11.25□□□□□ -0.61
SNCAIP-208ENST00000506272 MKRN4PQ13434 485 aaPredicted RBP11.14□□□□□ -0.63
SNCAIP-208ENST00000506272 FBLN2P98095 1184 aa11.11□□□□□ -0.63
SNCAIP-208ENST00000506272 ZBTB12Q9Y330 459 aaPredicted RBP11.1□□□□□ -0.63
SNCAIP-208ENST00000506272 FKBP8Q14318 412 aa11.02□□□□□ -0.65
SNCAIP-208ENST00000506272 OSCARQ8IYS5 282 aa10.92□□□□□ -0.66
SNCAIP-208ENST00000506272 SPDYE4A6NLX3 237 aa10.91□□□□□ -0.66
SNCAIP-208ENST00000506272 SPDYE2BA6NHP3 402 aa10.84□□□□□ -0.67
SNCAIP-208ENST00000506272 SPDYE6P0CI01 402 aa10.84□□□□□ -0.67
SNCAIP-208ENST00000506272 SPDYE2Q495Y8 402 aa10.84□□□□□ -0.67
SNCAIP-208ENST00000506272 ZNF692Q9BU19 519 aaPredicted RBP10.81□□□□□ -0.68
SNCAIP-208ENST00000506272 RB1CC1Q8TDY2 1594 aa10.79□□□□□ -0.68
SNCAIP-208ENST00000506272 PROM2Q8N271 834 aa10.76□□□□□ -0.69
SNCAIP-208ENST00000506272 SSUH2Q9Y2M2 353 aa10.76□□□□□ -0.69
SNCAIP-208ENST00000506272 NACADO15069 1562 aa10.74□□□□□ -0.69
SNCAIP-208ENST00000506272 RBM42Q9BTD8 480 aaKnown RBP10.74□□□□□ -0.69
SNCAIP-208ENST00000506272 UNC13AQ9UPW8 1703 aa10.72□□□□□ -0.69
SNCAIP-208ENST00000506272 ZCCHC6Q5VYS8 1495 aaKnown RBP10.72□□□□□ -0.69
SNCAIP-208ENST00000506272 DCAF8L2P0C7V8 631 aa10.7□□□□□ -0.7
SNCAIP-208ENST00000506272 PABPN1Q86U42 306 aaKnown RBP eCLIP10.67□□□□□ -0.7
SNCAIP-208ENST00000506272 AKT1S1Q96B36 256 aa10.64□□□□□ -0.71
SNCAIP-208ENST00000506272 MYO15BQ96JP2 1530 aa10.62□□□□□ -0.71
SNCAIP-208ENST00000506272 FBXO3Q9UK99 471 aa10.59□□□□□ -0.71
SNCAIP-208ENST00000506272 DCAF1Q9Y4B6 1507 aa10.58□□□□□ -0.72
SNCAIP-208ENST00000506272 REM2Q8IYK8 340 aaPredicted RBP10.55□□□□□ -0.72
SNCAIP-208ENST00000506272 SCRIBQ14160 1630 aa10.54□□□□□ -0.72
SNCAIP-208ENST00000506272 STAG3Q9UJ98 1225 aa10.51□□□□□ -0.73
SNCAIP-208ENST00000506272 BICRAQ9NZM4 1560 aa10.51□□□□□ -0.73
SNCAIP-208ENST00000506272 SPDYE1Q8NFV5 336 aaPredicted RBP10.49□□□□□ -0.73
SNCAIP-208ENST00000506272 VASPP50552 380 aaPredicted RBP10.45□□□□□ -0.74
SNCAIP-208ENST00000506272 CLEC11AQ9Y240 323 aa10.44□□□□□ -0.74
SNCAIP-208ENST00000506272 PITPNM1O00562 1244 aa10.42□□□□□ -0.74
SNCAIP-208ENST00000506272 PRR29P0C7W0 189 aa10.36□□□□□ -0.75
SNCAIP-208ENST00000506272 MIER1Q8N108 512 aa10.35□□□□□ -0.75
SNCAIP-208ENST00000506272 PLCD3Q8N3E9 789 aa10.34□□□□□ -0.75
SNCAIP-208ENST00000506272 IFNLR1Q8IU57 520 aaPredicted RBP10.33□□□□□ -0.76
SNCAIP-208ENST00000506272 SHROOM4Q9ULL8 1493 aa10.29□□□□□ -0.76
SNCAIP-208ENST00000506272 CREBZFQ9NS37 354 aa10.27□□□□□ -0.77
SNCAIP-208ENST00000506272 PLEKHG5O94827 1062 aa10.26□□□□□ -0.77
SNCAIP-208ENST00000506272 CHRDL2Q6WN34 429 aa10.26□□□□□ -0.77
SNCAIP-208ENST00000506272 KLHL34Q8N239 644 aa10.25□□□□□ -0.77
SNCAIP-208ENST00000506272 FXR2P51116 673 aaKnown RBP eCLIP10.22□□□□□ -0.77
SNCAIP-208ENST00000506272 EIF4G1Q04637 1599 aaKnown RBP10.22□□□□□ -0.77
SNCAIP-208ENST00000506272 AMER1Q5JTC6 1135 aaPredicted RBP10.2□□□□□ -0.78
SNCAIP-208ENST00000506272 CHADLQ6NUI6 762 aa10.2□□□□□ -0.78
SNCAIP-208ENST00000506272 CC2D2AQ9P2K1 1620 aa10.2□□□□□ -0.78
SNCAIP-208ENST00000506272 ZBTB47Q9UFB7 747 aaPredicted RBP10.2□□□□□ -0.78
SNCAIP-208ENST00000506272 MNX1P50219 401 aaPredicted RBP10.18□□□□□ -0.78
SNCAIP-208ENST00000506272 SPOCK2Q92563 424 aa10.18□□□□□ -0.78
SNCAIP-208ENST00000506272 RTN4Q9NQC3 1192 aaKnown RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms