RNA–Protein interactions for RNA: ENST00000506024.5

PDE4D-214, Transcript of phosphodiesterase 4D, humanhuman

TSL 4

Gene PDE4D, Length 599 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-214ENST00000506024 AEBP2Q6ZN18 517 aaPredicted RBP17.06■□□□□ 0.32
PDE4D-214ENST00000506024 CHIC1Q5VXU3 224 aa16.61■□□□□ 0.25
PDE4D-214ENST00000506024 PHF23Q9BUL5 403 aaPredicted RBP14.59□□□□□ -0.07
PDE4D-214ENST00000506024 SENP3Q9H4L4 574 aaPredicted RBP14.51□□□□□ -0.09
PDE4D-214ENST00000506024 PLPPR3Q6T4P5 718 aa13.48□□□□□ -0.25
PDE4D-214ENST00000506024 FOXD1Q16676 465 aa13.46□□□□□ -0.25
PDE4D-214ENST00000506024 ADRA2BP18089 450 aa12.93□□□□□ -0.34
PDE4D-214ENST00000506024 PPP6R1Q9UPN7 881 aa12.91□□□□□ -0.34
PDE4D-214ENST00000506024 PIAS4Q8N2W9 510 aaPredicted RBP12.73□□□□□ -0.37
PDE4D-214ENST00000506024 MSH5O43196 834 aa12.45□□□□□ -0.42
PDE4D-214ENST00000506024 PPP4R3CPQ6ZMV5 832 aa11.88□□□□□ -0.51
PDE4D-214ENST00000506024 SCAF1Q9H7N4 1312 aaKnown RBP11.84□□□□□ -0.51
PDE4D-214ENST00000506024 MAPK8IP2Q13387 824 aaPredicted RBP11.74□□□□□ -0.53
PDE4D-214ENST00000506024 NCBP3Q53F19 620 aaKnown RBP11.58□□□□□ -0.56
PDE4D-214ENST00000506024 DMRT2Q9Y5R5 561 aa11.56□□□□□ -0.56
PDE4D-214ENST00000506024 CNKSR2Q8WXI2 1034 aa11.55□□□□□ -0.56
PDE4D-214ENST00000506024 KCNA4P22459 653 aa11.53□□□□□ -0.56
PDE4D-214ENST00000506024 POTEDQ86YR6 584 aa11.44□□□□□ -0.58
PDE4D-214ENST00000506024 NPM3O75607 178 aaKnown RBP11.36□□□□□ -0.59
PDE4D-214ENST00000506024 RNF216Q9NWF9 866 aaPredicted RBP11.32□□□□□ -0.6
PDE4D-214ENST00000506024 HOXD11P31277 338 aaPredicted RBP11.27□□□□□ -0.61
PDE4D-214ENST00000506024 DCAF8L1A6NGE4 600 aa11.17□□□□□ -0.62
PDE4D-214ENST00000506024 SLC4A1APQ9BWU0 796 aaKnown RBP11□□□□□ -0.65
PDE4D-214ENST00000506024 DNAJC5BQ9UF47 199 aa10.94□□□□□ -0.66
PDE4D-214ENST00000506024 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.84□□□□□ -0.67
PDE4D-214ENST00000506024 SLC4A2P04920 1241 aa10.73□□□□□ -0.69
PDE4D-214ENST00000506024 NISCHQ9Y2I1 1504 aa10.65□□□□□ -0.7
PDE4D-214ENST00000506024 EHMT2Q96KQ7 1210 aa10.65□□□□□ -0.7
PDE4D-214ENST00000506024 RNF39Q9H2S5 420 aa10.64□□□□□ -0.71
PDE4D-214ENST00000506024 FOXD4L1Q9NU39 408 aa10.64□□□□□ -0.71
PDE4D-214ENST00000506024 U3KPZ7 1027 aaPredicted RBP10.59□□□□□ -0.71
PDE4D-214ENST00000506024 ZBTB22O15209 634 aa10.58□□□□□ -0.72
PDE4D-214ENST00000506024 C1QBPQ07021 282 aaKnown RBP10.53□□□□□ -0.72
PDE4D-214ENST00000506024 MYCNP04198 464 aaPredicted RBP10.52□□□□□ -0.73
PDE4D-214ENST00000506024 CSRNP3Q8WYN3 585 aa10.49□□□□□ -0.73
PDE4D-214ENST00000506024 CACNB1Q02641 598 aaPredicted RBP10.48□□□□□ -0.73
PDE4D-214ENST00000506024 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.47□□□□□ -0.73
PDE4D-214ENST00000506024 HNRNPUL2Q1KMD3 747 aaKnown RBP10.47□□□□□ -0.73
PDE4D-214ENST00000506024 SAMD1Q6SPF0 538 aaPredicted RBP10.43□□□□□ -0.74
PDE4D-214ENST00000506024 APLP2Q06481 763 aa10.38□□□□□ -0.75
PDE4D-214ENST00000506024 CAPN15O75808 1086 aa10.34□□□□□ -0.75
PDE4D-214ENST00000506024 SPINK5Q9NQ38 1064 aaPredicted RBP10.34□□□□□ -0.75
PDE4D-214ENST00000506024 TRHP20396 242 aaPredicted RBP10.29□□□□□ -0.76
PDE4D-214ENST00000506024 ATXN8OSP0DMR3 200 aa10.24□□□□□ -0.77
PDE4D-214ENST00000506024 ZNF219Q9P2Y4 722 aaPredicted RBP10.24□□□□□ -0.77
PDE4D-214ENST00000506024 ATF5Q9Y2D1 282 aaPredicted RBP10.23□□□□□ -0.77
PDE4D-214ENST00000506024 ABCB7O75027 752 aa10.14□□□□□ -0.79
PDE4D-214ENST00000506024 DSG3P32926 999 aa10.12□□□□□ -0.79
PDE4D-214ENST00000506024 POLA2Q14181 598 aa10.07□□□□□ -0.8
PDE4D-214ENST00000506024 ABCC9O60706 1549 aa10□□□□□ -0.81
PDE4D-214ENST00000506024 ZBTB12Q9Y330 459 aaPredicted RBP9.88□□□□□ -0.83
PDE4D-214ENST00000506024 FBLN2P98095 1184 aa9.86□□□□□ -0.83
PDE4D-214ENST00000506024 MKRN4PQ13434 485 aaPredicted RBP9.76□□□□□ -0.85
PDE4D-214ENST00000506024 OSCARQ8IYS5 282 aa9.73□□□□□ -0.85
PDE4D-214ENST00000506024 CCDC180Q9P1Z9 1646 aa9.69□□□□□ -0.86
PDE4D-214ENST00000506024 RBM42Q9BTD8 480 aaKnown RBP9.67□□□□□ -0.86
PDE4D-214ENST00000506024 SPDYE2BA6NHP3 402 aa9.61□□□□□ -0.87
PDE4D-214ENST00000506024 SPDYE6P0CI01 402 aa9.61□□□□□ -0.87
PDE4D-214ENST00000506024 SPDYE2Q495Y8 402 aa9.61□□□□□ -0.87
PDE4D-214ENST00000506024 ZNF692Q9BU19 519 aaPredicted RBP9.6□□□□□ -0.87
PDE4D-214ENST00000506024 SPDYE4A6NLX3 237 aa9.57□□□□□ -0.88
PDE4D-214ENST00000506024 FKBP8Q14318 412 aa9.54□□□□□ -0.88
PDE4D-214ENST00000506024 AKT1S1Q96B36 256 aa9.53□□□□□ -0.88
PDE4D-214ENST00000506024 SSUH2Q9Y2M2 353 aa9.5□□□□□ -0.89
PDE4D-214ENST00000506024 PABPN1Q86U42 306 aaKnown RBP eCLIP9.46□□□□□ -0.9
PDE4D-214ENST00000506024 REM2Q8IYK8 340 aaPredicted RBP9.44□□□□□ -0.9
PDE4D-214ENST00000506024 RB1CC1Q8TDY2 1594 aa9.37□□□□□ -0.91
PDE4D-214ENST00000506024 CLEC11AQ9Y240 323 aa9.37□□□□□ -0.91
PDE4D-214ENST00000506024 SPDYE1Q8NFV5 336 aaPredicted RBP9.36□□□□□ -0.91
PDE4D-214ENST00000506024 PITPNM1O00562 1244 aa9.33□□□□□ -0.92
PDE4D-214ENST00000506024 PROM2Q8N271 834 aa9.31□□□□□ -0.92
PDE4D-214ENST00000506024 CHRDL2Q6WN34 429 aa9.29□□□□□ -0.92
PDE4D-214ENST00000506024 STAG3Q9UJ98 1225 aa9.28□□□□□ -0.92
PDE4D-214ENST00000506024 PRR29P0C7W0 189 aa9.25□□□□□ -0.93
PDE4D-214ENST00000506024 NACADO15069 1562 aa9.24□□□□□ -0.93
PDE4D-214ENST00000506024 FBXO3Q9UK99 471 aa9.2□□□□□ -0.94
PDE4D-214ENST00000506024 PIP4P2Q8N4L2 257 aa9.15□□□□□ -0.94
PDE4D-214ENST00000506024 FXR2P51116 673 aaKnown RBP eCLIP9.14□□□□□ -0.95
PDE4D-214ENST00000506024 PRKAR2AP13861 404 aaKnown RBP9.12□□□□□ -0.95
PDE4D-214ENST00000506024 CHADLQ6NUI6 762 aa9.12□□□□□ -0.95
PDE4D-214ENST00000506024 MIER1Q8N108 512 aa9.11□□□□□ -0.95
PDE4D-214ENST00000506024 DCAF8L2P0C7V8 631 aa9.1□□□□□ -0.95
PDE4D-214ENST00000506024 PLCD3Q8N3E9 789 aa9.1□□□□□ -0.95
PDE4D-214ENST00000506024 UNC13AQ9UPW8 1703 aa9.09□□□□□ -0.95
PDE4D-214ENST00000506024 BICRAQ9NZM4 1560 aa9.09□□□□□ -0.95
PDE4D-214ENST00000506024 PLEKHG5O94827 1062 aa9.09□□□□□ -0.95
PDE4D-214ENST00000506024 POTEHQ6S545 545 aa9.07□□□□□ -0.96
PDE4D-214ENST00000506024 CREBZFQ9NS37 354 aa9.07□□□□□ -0.96
PDE4D-214ENST00000506024 VASPP50552 380 aaPredicted RBP9.06□□□□□ -0.96
PDE4D-214ENST00000506024 CECR2Q9BXF3 1484 aa9.04□□□□□ -0.96
PDE4D-214ENST00000506024 DNAJC5Q9H3Z4 198 aa9.03□□□□□ -0.96
PDE4D-214ENST00000506024 MYO15BQ96JP2 1530 aa9.02□□□□□ -0.97
PDE4D-214ENST00000506024 FARP1Q9Y4F1 1045 aaPredicted RBP9□□□□□ -0.97
PDE4D-214ENST00000506024 CC2D2AQ9P2K1 1620 aa8.99□□□□□ -0.97
PDE4D-214ENST00000506024 KLHL34Q8N239 644 aa8.99□□□□□ -0.97
PDE4D-214ENST00000506024 SHROOM4Q9ULL8 1493 aa8.99□□□□□ -0.97
PDE4D-214ENST00000506024 ZBTB47Q9UFB7 747 aaPredicted RBP8.97□□□□□ -0.97
PDE4D-214ENST00000506024 NPM1P06748 294 aaKnown RBP eCLIP8.96□□□□□ -0.98
PDE4D-214ENST00000506024 MNX1P50219 401 aaPredicted RBP8.93□□□□□ -0.98
PDE4D-214ENST00000506024 HAX1O00165 279 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms