RNA–Protein interactions for RNA: ENST00000506017.1

KCNQ4-203, Transcript of potassium voltage-gated channel subfamily Q member 4, humanhuman

TSL 2

Gene KCNQ4, Length 3,335 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ4-203ENST00000506017 NISCHQ9Y2I1 1504 aa25.63■■□□□ 1.69
KCNQ4-203ENST00000506017 SHROOM4Q9ULL8 1493 aa22.23■■□□□ 1.15
KCNQ4-203ENST00000506017 DCAF8L2P0C7V8 631 aa22.04■■□□□ 1.12
KCNQ4-203ENST00000506017 SUPT5HO00267 1087 aaKnown RBP21.93■■□□□ 1.1
KCNQ4-203ENST00000506017 CCDC180Q9P1Z9 1646 aa21.64■■□□□ 1.05
KCNQ4-203ENST00000506017 ZCCHC6Q5VYS8 1495 aaKnown RBP21.59■■□□□ 1.05
KCNQ4-203ENST00000506017 HRCP23327 699 aa21.37■■□□□ 1.01
KCNQ4-203ENST00000506017 PCGF6Q9BYE7 350 aa21.35■■□□□ 1.01
KCNQ4-203ENST00000506017 PPARGC1BQ86YN6 1023 aaKnown RBP21.21■□□□□ 0.99
KCNQ4-203ENST00000506017 CHIC1Q5VXU3 224 aa21.18■□□□□ 0.98
KCNQ4-203ENST00000506017 MYO15BQ96JP2 1530 aa21.09■□□□□ 0.97
KCNQ4-203ENST00000506017 LOC105371045A0A1W2PR82 267 aa20.88■□□□□ 0.93
KCNQ4-203ENST00000506017 DCAF1Q9Y4B6 1507 aa20.85■□□□□ 0.93
KCNQ4-203ENST00000506017 ABCC9O60706 1549 aa20.64■□□□□ 0.89
KCNQ4-203ENST00000506017 SCRIBQ14160 1630 aa20.56■□□□□ 0.88
KCNQ4-203ENST00000506017 TRIM26Q12899 539 aaPredicted RBP20.5■□□□□ 0.87
KCNQ4-203ENST00000506017 EHMT2Q96KQ7 1210 aa20.48■□□□□ 0.87
KCNQ4-203ENST00000506017 FAM9AQ8IZU1 332 aaPredicted RBP20.38■□□□□ 0.85
KCNQ4-203ENST00000506017 RSF1Q96T23 1441 aaPredicted RBP20.31■□□□□ 0.84
KCNQ4-203ENST00000506017 TRIM41Q8WV44 630 aa20.28■□□□□ 0.84
KCNQ4-203ENST00000506017 NACADO15069 1562 aa20.21■□□□□ 0.83
KCNQ4-203ENST00000506017 ZEB1P37275 1124 aaPredicted RBP20.17■□□□□ 0.82
KCNQ4-203ENST00000506017 PELP1Q8IZL8 1130 aaKnown RBP20.14■□□□□ 0.82
KCNQ4-203ENST00000506017 SCAF1Q9H7N4 1312 aaKnown RBP20.12■□□□□ 0.81
KCNQ4-203ENST00000506017 CECR2Q9BXF3 1484 aa20.11■□□□□ 0.81
KCNQ4-203ENST00000506017 RB1CC1Q8TDY2 1594 aa20.01■□□□□ 0.79
KCNQ4-203ENST00000506017 MROH2BQ7Z745 1585 aa19.96■□□□□ 0.79
KCNQ4-203ENST00000506017 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.89■□□□□ 0.78
KCNQ4-203ENST00000506017 TTBK1Q5TCY1 1321 aaPredicted RBP19.89■□□□□ 0.77
KCNQ4-203ENST00000506017 PABPN1Q86U42 306 aaKnown RBP eCLIP19.88■□□□□ 0.77
KCNQ4-203ENST00000506017 CCER1Q8TC90 406 aaPredicted RBP19.84■□□□□ 0.77
KCNQ4-203ENST00000506017 WIZO95785 1651 aa19.81■□□□□ 0.76
KCNQ4-203ENST00000506017 NEUROD1Q13562 356 aa19.74■□□□□ 0.75
KCNQ4-203ENST00000506017 BAZ1AQ9NRL2 1556 aaPredicted RBP19.72■□□□□ 0.75
KCNQ4-203ENST00000506017 ACIN1Q9UKV3 1341 aaKnown RBP19.7■□□□□ 0.74
KCNQ4-203ENST00000506017 GTF3C3Q9Y5Q9 886 aa19.66■□□□□ 0.74
KCNQ4-203ENST00000506017 DIEXFQ68CQ4 756 aaKnown RBP19.62■□□□□ 0.73
KCNQ4-203ENST00000506017 CENPBP07199 599 aaPredicted RBP19.56■□□□□ 0.72
KCNQ4-203ENST00000506017 YTHDC1Q96MU7 727 aaKnown RBP19.53■□□□□ 0.72
KCNQ4-203ENST00000506017 SMARCA4P51532 1647 aa19.5■□□□□ 0.71
KCNQ4-203ENST00000506017 CCDC88BA6NC98 1476 aa19.5■□□□□ 0.71
KCNQ4-203ENST00000506017 MYT1Q01538 1121 aa19.48■□□□□ 0.71
KCNQ4-203ENST00000506017 TOP2AP11388 1531 aaKnown RBP19.46■□□□□ 0.71
KCNQ4-203ENST00000506017 UBTFP17480 764 aaKnown RBP19.44■□□□□ 0.7
KCNQ4-203ENST00000506017 ABCC8Q09428 1581 aa19.43■□□□□ 0.7
KCNQ4-203ENST00000506017 UNC13AQ9UPW8 1703 aa19.41■□□□□ 0.7
KCNQ4-203ENST00000506017 SMARCA2P51531 1590 aa19.34■□□□□ 0.69
KCNQ4-203ENST00000506017 CSRNP3Q8WYN3 585 aa19.31■□□□□ 0.68
KCNQ4-203ENST00000506017 SOGA1O94964 1423 aa19.29■□□□□ 0.68
KCNQ4-203ENST00000506017 BICRAQ9NZM4 1560 aa19.28■□□□□ 0.68
KCNQ4-203ENST00000506017 RANGAP1P46060 587 aaPredicted RBP19.24■□□□□ 0.67
KCNQ4-203ENST00000506017 ZNF316A6NFI3 1004 aaPredicted RBP19.23■□□□□ 0.67
KCNQ4-203ENST00000506017 HNRNPUL2Q1KMD3 747 aaKnown RBP19.22■□□□□ 0.67
KCNQ4-203ENST00000506017 EIF4G1Q04637 1599 aaKnown RBP19.21■□□□□ 0.67
KCNQ4-203ENST00000506017 WRNQ14191 1432 aaPredicted RBP eCLIP19.19■□□□□ 0.66
KCNQ4-203ENST00000506017 BAZ1BQ9UIG0 1483 aaKnown RBP19.18■□□□□ 0.66
KCNQ4-203ENST00000506017 MIER1Q8N108 512 aa19.15■□□□□ 0.66
KCNQ4-203ENST00000506017 RUSC2Q8N2Y8 1516 aa19.15■□□□□ 0.66
KCNQ4-203ENST00000506017 ATAD2BQ9ULI0 1458 aa19.14■□□□□ 0.65
KCNQ4-203ENST00000506017 CEP162Q5TB80 1403 aa19.14■□□□□ 0.65
KCNQ4-203ENST00000506017 EEA1Q15075 1411 aa19.09■□□□□ 0.65
KCNQ4-203ENST00000506017 TNIKQ9UKE5 1360 aa19.08■□□□□ 0.65
KCNQ4-203ENST00000506017 APLP2Q06481 763 aa19.05■□□□□ 0.64
KCNQ4-203ENST00000506017 GOLGA3Q08378 1498 aa19.01■□□□□ 0.63
KCNQ4-203ENST00000506017 PEG3Q9GZU2 1588 aa18.99■□□□□ 0.63
KCNQ4-203ENST00000506017 SYNJ1O43426 1573 aa18.91■□□□□ 0.62
KCNQ4-203ENST00000506017 CEP164Q9UPV0 1460 aa18.9■□□□□ 0.62
KCNQ4-203ENST00000506017 CLIP1P30622 1438 aa18.87■□□□□ 0.61
KCNQ4-203ENST00000506017 RAPGEF2Q9Y4G8 1499 aa18.78■□□□□ 0.6
KCNQ4-203ENST00000506017 NCAPD3P42695 1498 aa18.75■□□□□ 0.59
KCNQ4-203ENST00000506017 KIF21BO75037 1637 aa18.67■□□□□ 0.58
KCNQ4-203ENST00000506017 VPS8Q8N3P4 1428 aa18.67■□□□□ 0.58
KCNQ4-203ENST00000506017 SUPT16HQ9Y5B9 1047 aaKnown RBP18.67■□□□□ 0.58
KCNQ4-203ENST00000506017 ITGAEP38570 1179 aa18.66■□□□□ 0.58
KCNQ4-203ENST00000506017 TOP2BQ02880 1626 aa18.65■□□□□ 0.58
KCNQ4-203ENST00000506017 KIF27Q86VH2 1401 aa18.64■□□□□ 0.57
KCNQ4-203ENST00000506017 HMGXB3Q12766 1538 aa18.64■□□□□ 0.57
KCNQ4-203ENST00000506017 BCANQ96GW7 911 aa18.63■□□□□ 0.57
KCNQ4-203ENST00000506017 ATP1B4Q9UN42 357 aaPredicted RBP18.58■□□□□ 0.56
KCNQ4-203ENST00000506017 CFTRP13569 1480 aa18.57■□□□□ 0.56
KCNQ4-203ENST00000506017 PRKCSHP14314 528 aaPredicted RBP18.57■□□□□ 0.56
KCNQ4-203ENST00000506017 CUX1P39880 1505 aa18.57■□□□□ 0.56
KCNQ4-203ENST00000506017 CADPSQ9ULU8 1353 aa18.53■□□□□ 0.56
KCNQ4-203ENST00000506017 KCNH8Q96L42 1107 aa18.52■□□□□ 0.56
KCNQ4-203ENST00000506017 KANK4Q5T7N3 995 aaPredicted RBP18.51■□□□□ 0.55
KCNQ4-203ENST00000506017 CUX2O14529 1486 aa18.51■□□□□ 0.55
KCNQ4-203ENST00000506017 PRXQ9BXM0 1461 aa18.51■□□□□ 0.55
KCNQ4-203ENST00000506017 TSHZ2Q9NRE2 1034 aa18.5■□□□□ 0.55
KCNQ4-203ENST00000506017 BIVM-ERCC5R4GMW8 1640 aa18.49■□□□□ 0.55
KCNQ4-203ENST00000506017 P3H3Q8IVL6 736 aa18.49■□□□□ 0.55
KCNQ4-203ENST00000506017 BCL11AQ9H165 835 aa18.48■□□□□ 0.55
KCNQ4-203ENST00000506017 DHX57Q6P158 1386 aaKnown RBP18.44■□□□□ 0.54
KCNQ4-203ENST00000506017 ERICH3Q5RHP9 1530 aa18.43■□□□□ 0.54
KCNQ4-203ENST00000506017 CARMIL1Q5VZK9 1371 aa18.41■□□□□ 0.54
KCNQ4-203ENST00000506017 IGF1RP08069 1367 aa18.4■□□□□ 0.54
KCNQ4-203ENST00000506017 FKBP8Q14318 412 aa18.39■□□□□ 0.54
KCNQ4-203ENST00000506017 ARAP1Q96P48 1450 aa18.39■□□□□ 0.53
KCNQ4-203ENST00000506017 DDX10Q13206 875 aaKnown RBP18.37■□□□□ 0.53
KCNQ4-203ENST00000506017 ANP32EQ9BTT0 268 aa18.37■□□□□ 0.53
KCNQ4-203ENST00000506017 CLSPNQ9HAW4 1339 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 662.3 ms