RNA–Protein interactions for RNA: ENST00000505860.5

ZCCHC9-206, Transcript of zinc finger CCHC-type containing 9, humanhuman

TSL 2

Gene ZCCHC9, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC9-206ENST00000505860 AEBP2Q6ZN18 517 aaPredicted RBP24.83■■□□□ 1.57
ZCCHC9-206ENST00000505860 CHIC1Q5VXU3 224 aa23.96■■□□□ 1.43
ZCCHC9-206ENST00000505860 PHF23Q9BUL5 403 aaPredicted RBP21.09■□□□□ 0.97
ZCCHC9-206ENST00000505860 SENP3Q9H4L4 574 aaPredicted RBP21.02■□□□□ 0.96
ZCCHC9-206ENST00000505860 FOXD1Q16676 465 aa19.6■□□□□ 0.73
ZCCHC9-206ENST00000505860 PLPPR3Q6T4P5 718 aa19.32■□□□□ 0.68
ZCCHC9-206ENST00000505860 POTEDQ86YR6 584 aa18.7■□□□□ 0.58
ZCCHC9-206ENST00000505860 PPP6R1Q9UPN7 881 aa18.69■□□□□ 0.58
ZCCHC9-206ENST00000505860 ADRA2BP18089 450 aa18.64■□□□□ 0.57
ZCCHC9-206ENST00000505860 PIAS4Q8N2W9 510 aaPredicted RBP18.41■□□□□ 0.54
ZCCHC9-206ENST00000505860 MSH5O43196 834 aa18.2■□□□□ 0.5
ZCCHC9-206ENST00000505860 PPP4R3CPQ6ZMV5 832 aa17.02■□□□□ 0.32
ZCCHC9-206ENST00000505860 MAPK8IP2Q13387 824 aaPredicted RBP17■□□□□ 0.31
ZCCHC9-206ENST00000505860 SCAF1Q9H7N4 1312 aaKnown RBP16.95■□□□□ 0.3
ZCCHC9-206ENST00000505860 DMRT2Q9Y5R5 561 aa16.76■□□□□ 0.27
ZCCHC9-206ENST00000505860 CNKSR2Q8WXI2 1034 aa16.57■□□□□ 0.24
ZCCHC9-206ENST00000505860 NCBP3Q53F19 620 aaKnown RBP16.43■□□□□ 0.22
ZCCHC9-206ENST00000505860 KCNA4P22459 653 aa16.39■□□□□ 0.21
ZCCHC9-206ENST00000505860 HOXD11P31277 338 aaPredicted RBP16.32■□□□□ 0.2
ZCCHC9-206ENST00000505860 RNF216Q9NWF9 866 aaPredicted RBP16.31■□□□□ 0.2
ZCCHC9-206ENST00000505860 NPM3O75607 178 aaKnown RBP16.28■□□□□ 0.2
ZCCHC9-206ENST00000505860 DCAF8L1A6NGE4 600 aa16.06■□□□□ 0.16
ZCCHC9-206ENST00000505860 CACNB1Q02641 598 aaPredicted RBP15.85■□□□□ 0.13
ZCCHC9-206ENST00000505860 DNAJC5BQ9UF47 199 aa15.78■□□□□ 0.12
ZCCHC9-206ENST00000505860 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.53■□□□□ 0.089e-8■□□□□ 8.3
ZCCHC9-206ENST00000505860 SLC4A1APQ9BWU0 796 aaKnown RBP15.52■□□□□ 0.08
ZCCHC9-206ENST00000505860 RNF39Q9H2S5 420 aa15.52■□□□□ 0.08
ZCCHC9-206ENST00000505860 SLC4A2P04920 1241 aa15.45■□□□□ 0.06
ZCCHC9-206ENST00000505860 U3KPZ7 1027 aaPredicted RBP15.31■□□□□ 0.04
ZCCHC9-206ENST00000505860 C1QBPQ07021 282 aaKnown RBP15.28■□□□□ 0.04
ZCCHC9-206ENST00000505860 FOXD4L1Q9NU39 408 aa15.12■□□□□ 0.01
ZCCHC9-206ENST00000505860 ZBTB22O15209 634 aa15.11■□□□□ 0.01
ZCCHC9-206ENST00000505860 MYCNP04198 464 aaPredicted RBP15.02■□□□□ -0
ZCCHC9-206ENST00000505860 SPINK5Q9NQ38 1064 aaPredicted RBP14.97□□□□□ -0.01
ZCCHC9-206ENST00000505860 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.93□□□□□ -0.02
ZCCHC9-206ENST00000505860 HNRNPUL2Q1KMD3 747 aaKnown RBP14.93□□□□□ -0.02
ZCCHC9-206ENST00000505860 SAMD1Q6SPF0 538 aaPredicted RBP14.89□□□□□ -0.03
ZCCHC9-206ENST00000505860 CAPN15O75808 1086 aa14.87□□□□□ -0.03
ZCCHC9-206ENST00000505860 EHMT2Q96KQ7 1210 aa14.85□□□□□ -0.03
ZCCHC9-206ENST00000505860 APLP2Q06481 763 aa14.82□□□□□ -0.04
ZCCHC9-206ENST00000505860 CSRNP3Q8WYN3 585 aa14.79□□□□□ -0.04
ZCCHC9-206ENST00000505860 TRHP20396 242 aaPredicted RBP14.76□□□□□ -0.05
ZCCHC9-206ENST00000505860 ZNF219Q9P2Y4 722 aaPredicted RBP14.71□□□□□ -0.05
ZCCHC9-206ENST00000505860 ATF5Q9Y2D1 282 aaPredicted RBP14.71□□□□□ -0.05
ZCCHC9-206ENST00000505860 DSG3P32926 999 aa14.7□□□□□ -0.06
ZCCHC9-206ENST00000505860 ABCB7O75027 752 aa14.62□□□□□ -0.07
ZCCHC9-206ENST00000505860 ATXN8OSP0DMR3 200 aa14.55□□□□□ -0.08
ZCCHC9-206ENST00000505860 POTEHQ6S545 545 aa14.54□□□□□ -0.08
ZCCHC9-206ENST00000505860 POLA2Q14181 598 aa14.45□□□□□ -0.1
ZCCHC9-206ENST00000505860 ZBTB12Q9Y330 459 aaPredicted RBP14.14□□□□□ -0.15
ZCCHC9-206ENST00000505860 MKRN4PQ13434 485 aaPredicted RBP14.04□□□□□ -0.16
ZCCHC9-206ENST00000505860 OSCARQ8IYS5 282 aa14.02□□□□□ -0.17
ZCCHC9-206ENST00000505860 FBLN2P98095 1184 aa14□□□□□ -0.17
ZCCHC9-206ENST00000505860 RBM42Q9BTD8 480 aaKnown RBP13.95□□□□□ -0.18
ZCCHC9-206ENST00000505860 SPDYE2BA6NHP3 402 aa13.77□□□□□ -0.21
ZCCHC9-206ENST00000505860 SPDYE6P0CI01 402 aa13.77□□□□□ -0.21
ZCCHC9-206ENST00000505860 SPDYE2Q495Y8 402 aa13.77□□□□□ -0.21
ZCCHC9-206ENST00000505860 AKT1S1Q96B36 256 aa13.74□□□□□ -0.21
ZCCHC9-206ENST00000505860 ZNF692Q9BU19 519 aaPredicted RBP13.69□□□□□ -0.22
ZCCHC9-206ENST00000505860 SSUH2Q9Y2M2 353 aa13.67□□□□□ -0.22
ZCCHC9-206ENST00000505860 REM2Q8IYK8 340 aaPredicted RBP13.64□□□□□ -0.23
ZCCHC9-206ENST00000505860 SPDYE4A6NLX3 237 aa13.56□□□□□ -0.24
ZCCHC9-206ENST00000505860 CHRDL2Q6WN34 429 aa13.53□□□□□ -0.24
ZCCHC9-206ENST00000505860 PITPNM1O00562 1244 aa13.52□□□□□ -0.25
ZCCHC9-206ENST00000505860 PABPN1Q86U42 306 aaKnown RBP eCLIP13.52□□□□□ -0.25
ZCCHC9-206ENST00000505860 SPDYE1Q8NFV5 336 aaPredicted RBP13.41□□□□□ -0.26
ZCCHC9-206ENST00000505860 CLEC11AQ9Y240 323 aa13.41□□□□□ -0.26
ZCCHC9-206ENST00000505860 FKBP8Q14318 412 aa13.38□□□□□ -0.27
ZCCHC9-206ENST00000505860 SP7Q8TDD2 431 aaPredicted RBP13.37□□□□□ -0.27
ZCCHC9-206ENST00000505860 PROM2Q8N271 834 aa13.32□□□□□ -0.28
ZCCHC9-206ENST00000505860 PIP4P2Q8N4L2 257 aa13.31□□□□□ -0.28
ZCCHC9-206ENST00000505860 FXR2P51116 673 aaKnown RBP eCLIP13.29□□□□□ -0.28
ZCCHC9-206ENST00000505860 PRR29P0C7W0 189 aa13.22□□□□□ -0.29
ZCCHC9-206ENST00000505860 STAG3Q9UJ98 1225 aa13.18□□□□□ -0.3
ZCCHC9-206ENST00000505860 PRKAR2AP13861 404 aaKnown RBP13.16□□□□□ -0.3
ZCCHC9-206ENST00000505860 CHADLQ6NUI6 762 aa13.14□□□□□ -0.31
ZCCHC9-206ENST00000505860 CREBZFQ9NS37 354 aa13.04□□□□□ -0.32
ZCCHC9-206ENST00000505860 FARP1Q9Y4F1 1045 aaPredicted RBP12.94□□□□□ -0.34
ZCCHC9-206ENST00000505860 HAX1O00165 279 aa12.92□□□□□ -0.34
ZCCHC9-206ENST00000505860 MNX1P50219 401 aaPredicted RBP12.89□□□□□ -0.35
ZCCHC9-206ENST00000505860 FBXO3Q9UK99 471 aa12.88□□□□□ -0.35
ZCCHC9-206ENST00000505860 MIER1Q8N108 512 aa12.86□□□□□ -0.35
ZCCHC9-206ENST00000505860 EVX2Q03828 476 aa12.85□□□□□ -0.35
ZCCHC9-206ENST00000505860 C19orf67A6NJJ6 358 aa12.84□□□□□ -0.35
ZCCHC9-206ENST00000505860 PLCD3Q8N3E9 789 aa12.82□□□□□ -0.36
ZCCHC9-206ENST00000505860 VASPP50552 380 aaPredicted RBP12.78□□□□□ -0.36
ZCCHC9-206ENST00000505860 PLEKHG5O94827 1062 aa12.77□□□□□ -0.37
ZCCHC9-206ENST00000505860 CD44P16070 742 aaKnown RBP12.76□□□□□ -0.37
ZCCHC9-206ENST00000505860 NPM1P06748 294 aaKnown RBP eCLIP12.74□□□□□ -0.37
ZCCHC9-206ENST00000505860 ZBTB47Q9UFB7 747 aaPredicted RBP12.65□□□□□ -0.38
ZCCHC9-206ENST00000505860 ZRANB1Q9UGI0 708 aa12.65□□□□□ -0.38
ZCCHC9-206ENST00000505860 RASEFQ8IZ41 740 aa12.62□□□□□ -0.39
ZCCHC9-206ENST00000505860 IFNLR1Q8IU57 520 aaPredicted RBP12.61□□□□□ -0.39
ZCCHC9-206ENST00000505860 NUBP1P53384 320 aa12.6□□□□□ -0.39
ZCCHC9-206ENST00000505860 PAK3O75914 559 aaPredicted RBP12.59□□□□□ -0.39
ZCCHC9-206ENST00000505860 TSPYL2Q9H2G4 693 aaPredicted RBP12.59□□□□□ -0.39
ZCCHC9-206ENST00000505860 KLHL34Q8N239 644 aa12.58□□□□□ -0.4
ZCCHC9-206ENST00000505860 ZNF579Q8NAF0 562 aaKnown RBP12.58□□□□□ -0.4
ZCCHC9-206ENST00000505860 GABBR2O75899 941 aa12.55□□□□□ -0.4
ZCCHC9-206ENST00000505860 PHF12Q96QT6 1004 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 235.8 ms