RNA–Protein interactions for RNA: ENST00000505479.1

SEC31A-216, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

TSL 2

Gene SEC31A, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-216ENST00000505479 AEBP2Q6ZN18 517 aaPredicted RBP20.52■□□□□ 0.88
SEC31A-216ENST00000505479 CHIC1Q5VXU3 224 aa20.41■□□□□ 0.86
SEC31A-216ENST00000505479 PHF23Q9BUL5 403 aaPredicted RBP17.98■□□□□ 0.47
SEC31A-216ENST00000505479 SENP3Q9H4L4 574 aaPredicted RBP17.34■□□□□ 0.37
SEC31A-216ENST00000505479 PLPPR3Q6T4P5 718 aa16.73■□□□□ 0.27
SEC31A-216ENST00000505479 FOXD1Q16676 465 aa16.05■□□□□ 0.16
SEC31A-216ENST00000505479 ADRA2BP18089 450 aa15.75■□□□□ 0.11
SEC31A-216ENST00000505479 PPP6R1Q9UPN7 881 aa15.73■□□□□ 0.11
SEC31A-216ENST00000505479 PIAS4Q8N2W9 510 aaPredicted RBP15.24■□□□□ 0.03
SEC31A-216ENST00000505479 KCNA4P22459 653 aa14.89□□□□□ -0.03
SEC31A-216ENST00000505479 PPP4R3CPQ6ZMV5 832 aa14.8□□□□□ -0.04
SEC31A-216ENST00000505479 MSH5O43196 834 aa14.65□□□□□ -0.06
SEC31A-216ENST00000505479 NCBP3Q53F19 620 aaKnown RBP14.51□□□□□ -0.09
SEC31A-216ENST00000505479 SCAF1Q9H7N4 1312 aaKnown RBP14.4□□□□□ -0.1
SEC31A-216ENST00000505479 NPM3O75607 178 aaKnown RBP14.31□□□□□ -0.12
SEC31A-216ENST00000505479 CNKSR2Q8WXI2 1034 aa14.29□□□□□ -0.12
SEC31A-216ENST00000505479 EHMT2Q96KQ7 1210 aa14.29□□□□□ -0.12
SEC31A-216ENST00000505479 SLC4A1APQ9BWU0 796 aaKnown RBP14.25□□□□□ -0.13
SEC31A-216ENST00000505479 MAPK8IP2Q13387 824 aaPredicted RBP14.17□□□□□ -0.14
SEC31A-216ENST00000505479 CSRNP3Q8WYN3 585 aa13.93□□□□□ -0.18
SEC31A-216ENST00000505479 RNF216Q9NWF9 866 aaPredicted RBP13.92□□□□□ -0.18
SEC31A-216ENST00000505479 DMRT2Q9Y5R5 561 aa13.9□□□□□ -0.18
SEC31A-216ENST00000505479 DNAJC5BQ9UF47 199 aa13.81□□□□□ -0.2
SEC31A-216ENST00000505479 HOXD11P31277 338 aaPredicted RBP13.77□□□□□ -0.21
SEC31A-216ENST00000505479 POTEDQ86YR6 584 aa13.72□□□□□ -0.21
SEC31A-216ENST00000505479 ZBTB22O15209 634 aa13.71□□□□□ -0.21
SEC31A-216ENST00000505479 FOXD4L1Q9NU39 408 aa13.6□□□□□ -0.23
SEC31A-216ENST00000505479 SLC4A2P04920 1241 aa13.42□□□□□ -0.26
SEC31A-216ENST00000505479 DCAF8L1A6NGE4 600 aa13.29□□□□□ -0.28
SEC31A-216ENST00000505479 MYCNP04198 464 aaPredicted RBP13.22□□□□□ -0.29
SEC31A-216ENST00000505479 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.12□□□□□ -0.31
SEC31A-216ENST00000505479 ATXN8OSP0DMR3 200 aa13.06□□□□□ -0.32
SEC31A-216ENST00000505479 U3KPZ7 1027 aaPredicted RBP12.96□□□□□ -0.33
SEC31A-216ENST00000505479 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.91□□□□□ -0.34
SEC31A-216ENST00000505479 HNRNPUL2Q1KMD3 747 aaKnown RBP12.91□□□□□ -0.34
SEC31A-216ENST00000505479 SAMD1Q6SPF0 538 aaPredicted RBP12.89□□□□□ -0.35
SEC31A-216ENST00000505479 ATF5Q9Y2D1 282 aaPredicted RBP12.83□□□□□ -0.36
SEC31A-216ENST00000505479 APLP2Q06481 763 aa12.69□□□□□ -0.38
SEC31A-216ENST00000505479 FKBP8Q14318 412 aa12.59□□□□□ -0.39
SEC31A-216ENST00000505479 RNF39Q9H2S5 420 aa12.59□□□□□ -0.39
SEC31A-216ENST00000505479 ZNF219Q9P2Y4 722 aaPredicted RBP12.58□□□□□ -0.4
SEC31A-216ENST00000505479 SPINK5Q9NQ38 1064 aaPredicted RBP12.49□□□□□ -0.41
SEC31A-216ENST00000505479 C1QBPQ07021 282 aaKnown RBP12.46□□□□□ -0.41
SEC31A-216ENST00000505479 TRHP20396 242 aaPredicted RBP12.45□□□□□ -0.42
SEC31A-216ENST00000505479 CAPN15O75808 1086 aa12.42□□□□□ -0.42
SEC31A-216ENST00000505479 POLA2Q14181 598 aa12.32□□□□□ -0.44
SEC31A-216ENST00000505479 CACNB1Q02641 598 aaPredicted RBP12.31□□□□□ -0.44
SEC31A-216ENST00000505479 MKRN4PQ13434 485 aaPredicted RBP12.3□□□□□ -0.44
SEC31A-216ENST00000505479 FBLN2P98095 1184 aa12.27□□□□□ -0.45
SEC31A-216ENST00000505479 ABCB7O75027 752 aa12.22□□□□□ -0.45
SEC31A-216ENST00000505479 SPDYE4A6NLX3 237 aa12.2□□□□□ -0.46
SEC31A-216ENST00000505479 ZBTB12Q9Y330 459 aaPredicted RBP12.15□□□□□ -0.46
SEC31A-216ENST00000505479 AMER1Q5JTC6 1135 aaPredicted RBP12.13□□□□□ -0.47
SEC31A-216ENST00000505479 DSG3P32926 999 aa12.11□□□□□ -0.47
SEC31A-216ENST00000505479 RTN4Q9NQC3 1192 aaKnown RBP12.11□□□□□ -0.47
SEC31A-216ENST00000505479 PROM2Q8N271 834 aa12.05□□□□□ -0.48
SEC31A-216ENST00000505479 FBXO3Q9UK99 471 aa12.01□□□□□ -0.49
SEC31A-216ENST00000505479 NISCHQ9Y2I1 1504 aa11.97□□□□□ -0.49
SEC31A-216ENST00000505479 OSCARQ8IYS5 282 aa11.92□□□□□ -0.5
SEC31A-216ENST00000505479 SPDYE2BA6NHP3 402 aa11.86□□□□□ -0.51
SEC31A-216ENST00000505479 SPDYE6P0CI01 402 aa11.86□□□□□ -0.51
SEC31A-216ENST00000505479 SPDYE2Q495Y8 402 aa11.86□□□□□ -0.51
SEC31A-216ENST00000505479 ZNF692Q9BU19 519 aaPredicted RBP11.86□□□□□ -0.51
SEC31A-216ENST00000505479 VASPP50552 380 aaPredicted RBP11.85□□□□□ -0.51
SEC31A-216ENST00000505479 SSUH2Q9Y2M2 353 aa11.81□□□□□ -0.52
SEC31A-216ENST00000505479 PABPN1Q86U42 306 aaKnown RBP eCLIP11.73□□□□□ -0.535e-7■■□□□ 13.7
SEC31A-216ENST00000505479 IFNLR1Q8IU57 520 aaPredicted RBP11.72□□□□□ -0.53
SEC31A-216ENST00000505479 STAG3Q9UJ98 1225 aa11.66□□□□□ -0.54
SEC31A-216ENST00000505479 SLC24A1O60721 1099 aa11.57□□□□□ -0.56
SEC31A-216ENST00000505479 KLHL34Q8N239 644 aa11.56□□□□□ -0.56
SEC31A-216ENST00000505479 PLCD3Q8N3E9 789 aa11.55□□□□□ -0.56
SEC31A-216ENST00000505479 RBM42Q9BTD8 480 aaKnown RBP11.54□□□□□ -0.56
SEC31A-216ENST00000505479 SPOCK2Q92563 424 aa11.52□□□□□ -0.57
SEC31A-216ENST00000505479 MIER1Q8N108 512 aa11.51□□□□□ -0.57
SEC31A-216ENST00000505479 PKD2Q13563 968 aa11.47□□□□□ -0.57
SEC31A-216ENST00000505479 AKT1S1Q96B36 256 aa11.47□□□□□ -0.57
SEC31A-216ENST00000505479 PLEKHG5O94827 1062 aa11.43□□□□□ -0.58
SEC31A-216ENST00000505479 SPDYE1Q8NFV5 336 aaPredicted RBP11.41□□□□□ -0.58
SEC31A-216ENST00000505479 ZBTB47Q9UFB7 747 aaPredicted RBP11.39□□□□□ -0.59
SEC31A-216ENST00000505479 DCAF8L2P0C7V8 631 aa11.38□□□□□ -0.59
SEC31A-216ENST00000505479 REM2Q8IYK8 340 aaPredicted RBP11.36□□□□□ -0.59
SEC31A-216ENST00000505479 CLEC11AQ9Y240 323 aa11.35□□□□□ -0.59
SEC31A-216ENST00000505479 ECM2O94769 699 aaPredicted RBP11.34□□□□□ -0.59
SEC31A-216ENST00000505479 PRR29P0C7W0 189 aa11.29□□□□□ -0.6
SEC31A-216ENST00000505479 CIZ1Q9ULV3 898 aaPredicted RBP11.28□□□□□ -0.6
SEC31A-216ENST00000505479 CREBZFQ9NS37 354 aa11.25□□□□□ -0.61
SEC31A-216ENST00000505479 PITPNM1O00562 1244 aa11.23□□□□□ -0.61
SEC31A-216ENST00000505479 RGL2O15211 777 aa11.22□□□□□ -0.61
SEC31A-216ENST00000505479 PLCB2Q00722 1185 aa11.21□□□□□ -0.61
SEC31A-216ENST00000505479 NUBP1P53384 320 aa11.19□□□□□ -0.62
SEC31A-216ENST00000505479 MNX1P50219 401 aaPredicted RBP11.17□□□□□ -0.62
SEC31A-216ENST00000505479 GSE1Q14687 1217 aa11.17□□□□□ -0.62
SEC31A-216ENST00000505479 TRIM41Q8WV44 630 aa11.17□□□□□ -0.62
SEC31A-216ENST00000505479 NPM1P06748 294 aaKnown RBP eCLIP11.12□□□□□ -0.63
SEC31A-216ENST00000505479 DCAF8Q5TAQ9 597 aa11.12□□□□□ -0.63
SEC31A-216ENST00000505479 BBXQ8WY36 941 aaPredicted RBP11.1□□□□□ -0.63
SEC31A-216ENST00000505479 FAM212AQ96EL1 285 aa11.1□□□□□ -0.63
SEC31A-216ENST00000505479 RASEFQ8IZ41 740 aa11.07□□□□□ -0.64
SEC31A-216ENST00000505479 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.07□□□□□ -0.64
SEC31A-216ENST00000505479 HAP1P54257 671 aaPredicted RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms