RNA–Protein interactions for RNA: ENST00000505119.1

NEK1-202, Transcript of NIMA related kinase 1, humanhuman

TSL 2

Gene NEK1, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-202ENST00000505119 AEBP2Q6ZN18 517 aaPredicted RBP32.79■■■□□ 2.84
NEK1-202ENST00000505119 CHIC1Q5VXU3 224 aa31.75■■■□□ 2.67
NEK1-202ENST00000505119 SENP3Q9H4L4 574 aaPredicted RBP27.95■■■□□ 2.06
NEK1-202ENST00000505119 PHF23Q9BUL5 403 aaPredicted RBP27.85■■■□□ 2.05
NEK1-202ENST00000505119 FOXD1Q16676 465 aa25.93■■□□□ 1.74
NEK1-202ENST00000505119 PLPPR3Q6T4P5 718 aa25.66■■□□□ 1.7
NEK1-202ENST00000505119 PPP6R1Q9UPN7 881 aa24.66■■□□□ 1.54
NEK1-202ENST00000505119 ADRA2BP18089 450 aa24.62■■□□□ 1.53
NEK1-202ENST00000505119 PIAS4Q8N2W9 510 aaPredicted RBP24.4■■□□□ 1.5
NEK1-202ENST00000505119 MSH5O43196 834 aa24.1■■□□□ 1.45
NEK1-202ENST00000505119 SCAF1Q9H7N4 1312 aaKnown RBP22.6■■□□□ 1.21
NEK1-202ENST00000505119 PPP4R3CPQ6ZMV5 832 aa22.53■■□□□ 1.2
NEK1-202ENST00000505119 POTEDQ86YR6 584 aa22.47■■□□□ 1.19
NEK1-202ENST00000505119 MAPK8IP2Q13387 824 aaPredicted RBP22.41■■□□□ 1.18
NEK1-202ENST00000505119 DMRT2Q9Y5R5 561 aa22.25■■□□□ 1.15
NEK1-202ENST00000505119 CNKSR2Q8WXI2 1034 aa22■■□□□ 1.11
NEK1-202ENST00000505119 NCBP3Q53F19 620 aaKnown RBP21.88■■□□□ 1.09
NEK1-202ENST00000505119 HOXD11P31277 338 aaPredicted RBP21.66■■□□□ 1.06
NEK1-202ENST00000505119 RNF216Q9NWF9 866 aaPredicted RBP21.66■■□□□ 1.06
NEK1-202ENST00000505119 KCNA4P22459 653 aa21.62■■□□□ 1.05
NEK1-202ENST00000505119 NPM3O75607 178 aaKnown RBP21.54■■□□□ 1.04
NEK1-202ENST00000505119 DCAF8L1A6NGE4 600 aa21.26■□□□□ 0.99
NEK1-202ENST00000505119 DNAJC5BQ9UF47 199 aa21.02■□□□□ 0.96
NEK1-202ENST00000505119 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.62■□□□□ 0.89
NEK1-202ENST00000505119 RNF39Q9H2S5 420 aa20.6■□□□□ 0.89
NEK1-202ENST00000505119 SLC4A1APQ9BWU0 796 aaKnown RBP20.55■□□□□ 0.88
NEK1-202ENST00000505119 SLC4A2P04920 1241 aa20.4■□□□□ 0.86
NEK1-202ENST00000505119 C1QBPQ07021 282 aaKnown RBP20.35■□□□□ 0.85
NEK1-202ENST00000505119 CACNB1Q02641 598 aaPredicted RBP20.27■□□□□ 0.84
NEK1-202ENST00000505119 U3KPZ7 1027 aaPredicted RBP20.25■□□□□ 0.83
NEK1-202ENST00000505119 FOXD4L1Q9NU39 408 aa20.04■□□□□ 0.8
NEK1-202ENST00000505119 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.94■□□□□ 0.78
NEK1-202ENST00000505119 MYCNP04198 464 aaPredicted RBP19.94■□□□□ 0.78
NEK1-202ENST00000505119 HNRNPUL2Q1KMD3 747 aaKnown RBP19.94■□□□□ 0.78
NEK1-202ENST00000505119 ZBTB22O15209 634 aa19.89■□□□□ 0.77
NEK1-202ENST00000505119 SAMD1Q6SPF0 538 aaPredicted RBP19.84■□□□□ 0.77
NEK1-202ENST00000505119 APLP2Q06481 763 aa19.82■□□□□ 0.76
NEK1-202ENST00000505119 SPINK5Q9NQ38 1064 aaPredicted RBP19.76■□□□□ 0.75
NEK1-202ENST00000505119 CAPN15O75808 1086 aa19.71■□□□□ 0.75
NEK1-202ENST00000505119 EHMT2Q96KQ7 1210 aa19.57■□□□□ 0.72
NEK1-202ENST00000505119 ZNF219Q9P2Y4 722 aaPredicted RBP19.57■□□□□ 0.72
NEK1-202ENST00000505119 TRHP20396 242 aaPredicted RBP19.52■□□□□ 0.72
NEK1-202ENST00000505119 CSRNP3Q8WYN3 585 aa19.5■□□□□ 0.71
NEK1-202ENST00000505119 DSG3P32926 999 aa19.47■□□□□ 0.71
NEK1-202ENST00000505119 ATXN8OSP0DMR3 200 aa19.39■□□□□ 0.69
NEK1-202ENST00000505119 ATF5Q9Y2D1 282 aaPredicted RBP19.36■□□□□ 0.69
NEK1-202ENST00000505119 ABCB7O75027 752 aa19.29■□□□□ 0.68
NEK1-202ENST00000505119 POLA2Q14181 598 aa19.14■□□□□ 0.65
NEK1-202ENST00000505119 ZBTB12Q9Y330 459 aaPredicted RBP18.88■□□□□ 0.61
NEK1-202ENST00000505119 FBLN2P98095 1184 aa18.63■□□□□ 0.57
NEK1-202ENST00000505119 RBM42Q9BTD8 480 aaKnown RBP18.61■□□□□ 0.57
NEK1-202ENST00000505119 MKRN4PQ13434 485 aaPredicted RBP18.53■□□□□ 0.56
NEK1-202ENST00000505119 OSCARQ8IYS5 282 aa18.53■□□□□ 0.56
NEK1-202ENST00000505119 SPDYE2BA6NHP3 402 aa18.31■□□□□ 0.52
NEK1-202ENST00000505119 SPDYE6P0CI01 402 aa18.31■□□□□ 0.52
NEK1-202ENST00000505119 SPDYE2Q495Y8 402 aa18.31■□□□□ 0.52
NEK1-202ENST00000505119 AKT1S1Q96B36 256 aa18.28■□□□□ 0.52
NEK1-202ENST00000505119 ZNF692Q9BU19 519 aaPredicted RBP18.15■□□□□ 0.5
NEK1-202ENST00000505119 SSUH2Q9Y2M2 353 aa18.13■□□□□ 0.49
NEK1-202ENST00000505119 REM2Q8IYK8 340 aaPredicted RBP18.08■□□□□ 0.48
NEK1-202ENST00000505119 SPDYE4A6NLX3 237 aa17.97■□□□□ 0.47
NEK1-202ENST00000505119 CHRDL2Q6WN34 429 aa17.93■□□□□ 0.46
NEK1-202ENST00000505119 PABPN1Q86U42 306 aaKnown RBP eCLIP17.91■□□□□ 0.46
NEK1-202ENST00000505119 PITPNM1O00562 1244 aa17.89■□□□□ 0.45
NEK1-202ENST00000505119 SPDYE1Q8NFV5 336 aaPredicted RBP17.84■□□□□ 0.45
NEK1-202ENST00000505119 POTEHQ6S545 545 aa17.74■□□□□ 0.43
NEK1-202ENST00000505119 CLEC11AQ9Y240 323 aa17.74■□□□□ 0.43
NEK1-202ENST00000505119 FKBP8Q14318 412 aa17.66■□□□□ 0.42
NEK1-202ENST00000505119 PROM2Q8N271 834 aa17.65■□□□□ 0.42
NEK1-202ENST00000505119 FXR2P51116 673 aaKnown RBP eCLIP17.62■□□□□ 0.41
NEK1-202ENST00000505119 PIP4P2Q8N4L2 257 aa17.62■□□□□ 0.41
NEK1-202ENST00000505119 STAG3Q9UJ98 1225 aa17.58■□□□□ 0.4
NEK1-202ENST00000505119 PRR29P0C7W0 189 aa17.55■□□□□ 0.4
NEK1-202ENST00000505119 PRKAR2AP13861 404 aaKnown RBP17.44■□□□□ 0.38
NEK1-202ENST00000505119 CHADLQ6NUI6 762 aa17.33■□□□□ 0.36
NEK1-202ENST00000505119 CREBZFQ9NS37 354 aa17.24■□□□□ 0.35
NEK1-202ENST00000505119 FBXO3Q9UK99 471 aa17.17■□□□□ 0.34
NEK1-202ENST00000505119 FARP1Q9Y4F1 1045 aaPredicted RBP17.17■□□□□ 0.34
NEK1-202ENST00000505119 HAX1O00165 279 aa17.12■□□□□ 0.33
NEK1-202ENST00000505119 PLEKHG5O94827 1062 aa17.05■□□□□ 0.32
NEK1-202ENST00000505119 MIER1Q8N108 512 aa17.05■□□□□ 0.32
NEK1-202ENST00000505119 C19orf67A6NJJ6 358 aa17.04■□□□□ 0.32
NEK1-202ENST00000505119 MNX1P50219 401 aaPredicted RBP17.04■□□□□ 0.32
NEK1-202ENST00000505119 PLCD3Q8N3E9 789 aa17.01■□□□□ 0.31
NEK1-202ENST00000505119 NPM1P06748 294 aaKnown RBP eCLIP16.98■□□□□ 0.31
NEK1-202ENST00000505119 CD44P16070 742 aaKnown RBP16.93■□□□□ 0.3
NEK1-202ENST00000505119 VASPP50552 380 aaPredicted RBP16.92■□□□□ 0.3
NEK1-202ENST00000505119 EVX2Q03828 476 aa16.92■□□□□ 0.3
NEK1-202ENST00000505119 SP7Q8TDD2 431 aaPredicted RBP16.92■□□□□ 0.3
NEK1-202ENST00000505119 ZBTB47Q9UFB7 747 aaPredicted RBP16.9■□□□□ 0.3
NEK1-202ENST00000505119 PAK3O75914 559 aaPredicted RBP16.79■□□□□ 0.28
NEK1-202ENST00000505119 ZRANB1Q9UGI0 708 aa16.76■□□□□ 0.27
NEK1-202ENST00000505119 ZNF579Q8NAF0 562 aaKnown RBP16.71■□□□□ 0.27
NEK1-202ENST00000505119 RASEFQ8IZ41 740 aa16.68■□□□□ 0.26
NEK1-202ENST00000505119 KLHL34Q8N239 644 aa16.68■□□□□ 0.26
NEK1-202ENST00000505119 NUBP1P53384 320 aa16.67■□□□□ 0.26
NEK1-202ENST00000505119 TSPYL2Q9H2G4 693 aaPredicted RBP16.65■□□□□ 0.26
NEK1-202ENST00000505119 CLCN6P51797 869 aa16.64■□□□□ 0.25
NEK1-202ENST00000505119 IFNLR1Q8IU57 520 aaPredicted RBP16.64■□□□□ 0.25
NEK1-202ENST00000505119 GABBR2O75899 941 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 132.4 ms