RNA–Protein interactions for RNA: ENST00000505089.6

LINC00504-201, long intergenic non-protein coding RNA 504, humanhuman

TSL 2 BASIC

Gene LINC00504, Length 4,672 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00504-201ENST00000505089 DCAF8L2P0C7V8 631 aa8.95□□□□□ -0.98
LINC00504-201ENST00000505089 SUPT5HO00267 1087 aaKnown RBP8.69□□□□□ -1.02
LINC00504-201ENST00000505089 PELP1Q8IZL8 1130 aaKnown RBP8.56□□□□□ -1.04
LINC00504-201ENST00000505089 EHMT2Q96KQ7 1210 aa8.55□□□□□ -1.04
LINC00504-201ENST00000505089 PCGF6Q9BYE7 350 aa8.39□□□□□ -1.07
LINC00504-201ENST00000505089 SHROOM4Q9ULL8 1493 aa8.38□□□□□ -1.07
LINC00504-201ENST00000505089 TTBK1Q5TCY1 1321 aaPredicted RBP8.29□□□□□ -1.08
LINC00504-201ENST00000505089 ERICH6Q7L0X2 663 aa8.29□□□□□ -1.08
LINC00504-201ENST00000505089 CENPBP07199 599 aaPredicted RBP8.28□□□□□ -1.08
LINC00504-201ENST00000505089 FAM9AQ8IZU1 332 aaPredicted RBP8.25□□□□□ -1.09
LINC00504-201ENST00000505089 APLP2Q06481 763 aa8.22□□□□□ -1.09
LINC00504-201ENST00000505089 MYT1Q01538 1121 aa8.18□□□□□ -1.1
LINC00504-201ENST00000505089 CCER1Q8TC90 406 aaPredicted RBP8.17□□□□□ -1.1
LINC00504-201ENST00000505089 YTHDC1Q96MU7 727 aaKnown RBP8.16□□□□□ -1.1
LINC00504-201ENST00000505089 ZEB1P37275 1124 aaPredicted RBP8.1□□□□□ -1.11
LINC00504-201ENST00000505089 NEFLP07196 543 aa8.06□□□□□ -1.12
LINC00504-201ENST00000505089 RANGAP1P46060 587 aaPredicted RBP8.06□□□□□ -1.12
LINC00504-201ENST00000505089 PPARGC1BQ86YN6 1023 aaKnown RBP7.97□□□□□ -1.13
LINC00504-201ENST00000505089 HRCP23327 699 aa7.94□□□□□ -1.14
LINC00504-201ENST00000505089 TRIM41Q8WV44 630 aa7.94□□□□□ -1.14
LINC00504-201ENST00000505089 NISCHQ9Y2I1 1504 aa7.93□□□□□ -1.14
LINC00504-201ENST00000505089 ATP1B4Q9UN42 357 aaPredicted RBP7.91□□□□□ -1.14
LINC00504-201ENST00000505089 UBTFP17480 764 aaKnown RBP7.88□□□□□ -1.15
LINC00504-201ENST00000505089 TRIM26Q12899 539 aaPredicted RBP7.85□□□□□ -1.15
LINC00504-201ENST00000505089 DAXXQ9UER7 740 aaPredicted RBP7.84□□□□□ -1.15
LINC00504-201ENST00000505089 CNGB1Q14028 1251 aaPredicted RBP7.79□□□□□ -1.16
LINC00504-201ENST00000505089 POLR3GLQ9BT43 218 aa7.77□□□□□ -1.17
LINC00504-201ENST00000505089 RTL5Q5HYW3 569 aaPredicted RBP7.76□□□□□ -1.17
LINC00504-201ENST00000505089 LOC105371045A0A1W2PR82 267 aa7.76□□□□□ -1.17
LINC00504-201ENST00000505089 ITGAEP38570 1179 aa7.76□□□□□ -1.17
LINC00504-201ENST00000505089 DIEXFQ68CQ4 756 aaKnown RBP7.73□□□□□ -1.17
LINC00504-201ENST00000505089 HNRNPUL2Q1KMD3 747 aaKnown RBP7.73□□□□□ -1.17
LINC00504-201ENST00000505089 GTF3C3Q9Y5Q9 886 aa7.72□□□□□ -1.17
LINC00504-201ENST00000505089 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.71□□□□□ -1.18
LINC00504-201ENST00000505089 BCANQ96GW7 911 aa7.7□□□□□ -1.18
LINC00504-201ENST00000505089 ZNF316A6NFI3 1004 aaPredicted RBP7.66□□□□□ -1.18
LINC00504-201ENST00000505089 CLSPNQ9HAW4 1339 aa7.65□□□□□ -1.18
LINC00504-201ENST00000505089 CHIC1Q5VXU3 224 aa7.62□□□□□ -1.19
LINC00504-201ENST00000505089 EIF5BO60841 1220 aaKnown RBP7.56□□□□□ -1.2
LINC00504-201ENST00000505089 CDK11AQ9UQ88 783 aaPredicted RBP7.54□□□□□ -1.2
LINC00504-201ENST00000505089 ACIN1Q9UKV3 1341 aaKnown RBP7.54□□□□□ -1.2
LINC00504-201ENST00000505089 SLC4A1APQ9BWU0 796 aaKnown RBP7.52□□□□□ -1.2
LINC00504-201ENST00000505089 MYT1LQ9UL68 1186 aa7.52□□□□□ -1.21
LINC00504-201ENST00000505089 NEUROD1Q13562 356 aa7.49□□□□□ -1.21
LINC00504-201ENST00000505089 BCL11AQ9H165 835 aa7.47□□□□□ -1.21
LINC00504-201ENST00000505089 ANP32CO43423 234 aa7.46□□□□□ -1.22
LINC00504-201ENST00000505089 NPM2Q86SE8 214 aaKnown RBP7.45□□□□□ -1.22
LINC00504-201ENST00000505089 FAM50AQ14320 339 aaKnown RBP7.44□□□□□ -1.22
LINC00504-201ENST00000505089 ANP32AP39687 249 aaKnown RBP7.43□□□□□ -1.22
LINC00504-201ENST00000505089 ZNF326Q5BKZ1 582 aaKnown RBP7.42□□□□□ -1.22
LINC00504-201ENST00000505089 TRIM52Q96A61 297 aa7.41□□□□□ -1.22
LINC00504-201ENST00000505089 FKBP8Q14318 412 aa7.4□□□□□ -1.22
LINC00504-201ENST00000505089 NBR1Q14596 966 aa7.38□□□□□ -1.23
LINC00504-201ENST00000505089 ZBTB47Q9UFB7 747 aaPredicted RBP7.37□□□□□ -1.23
LINC00504-201ENST00000505089 SCAF1Q9H7N4 1312 aaKnown RBP7.36□□□□□ -1.23
LINC00504-201ENST00000505089 CANXP27824 592 aaKnown RBP7.35□□□□□ -1.23
LINC00504-201ENST00000505089 ARXQ96QS3 562 aa7.34□□□□□ -1.23
LINC00504-201ENST00000505089 GLIPR1L2Q4G1C9 344 aa7.34□□□□□ -1.23
LINC00504-201ENST00000505089 HNRNPUQ00839 825 aaKnown RBP eCLIP7.31□□□□□ -1.24
LINC00504-201ENST00000505089 ANP32BQ92688 251 aaKnown RBP7.3□□□□□ -1.24
LINC00504-201ENST00000505089 SLC24A1O60721 1099 aa7.29□□□□□ -1.24
LINC00504-201ENST00000505089 HSP90AA1P07900 732 aaKnown RBP7.29□□□□□ -1.24
LINC00504-201ENST00000505089 SALL2Q9Y467 1007 aaPredicted RBP7.28□□□□□ -1.24
LINC00504-201ENST00000505089 DDX10Q13206 875 aaKnown RBP7.27□□□□□ -1.25
LINC00504-201ENST00000505089 FAM9BQ8IZU0 186 aa7.27□□□□□ -1.25
LINC00504-201ENST00000505089 IRX6P78412 446 aaPredicted RBP7.26□□□□□ -1.25
LINC00504-201ENST00000505089 CCDC136Q96JN2 1154 aa7.25□□□□□ -1.25
LINC00504-201ENST00000505089 UPF2Q9HAU5 1272 aaKnown RBP7.23□□□□□ -1.25
LINC00504-201ENST00000505089 MIER1Q8N108 512 aa7.22□□□□□ -1.25
LINC00504-201ENST00000505089 NEFMP07197 916 aa7.21□□□□□ -1.26
LINC00504-201ENST00000505089 RTN4Q9NQC3 1192 aaKnown RBP7.21□□□□□ -1.26
LINC00504-201ENST00000505089 ARID3CA6NKF2 412 aa7.2□□□□□ -1.26
LINC00504-201ENST00000505089 ANP32EQ9BTT0 268 aa7.2□□□□□ -1.26
LINC00504-201ENST00000505089 P3H3Q8IVL6 736 aa7.19□□□□□ -1.26
LINC00504-201ENST00000505089 HIRIP3Q9BW71 556 aaPredicted RBP7.17□□□□□ -1.26
LINC00504-201ENST00000505089 TMC1Q8TDI8 760 aa7.15□□□□□ -1.26
LINC00504-201ENST00000505089 MRS2Q9HD23 443 aa7.15□□□□□ -1.26
LINC00504-201ENST00000505089 TONSLQ96HA7 1378 aa7.15□□□□□ -1.26
LINC00504-201ENST00000505089 SENP3-EIF4A1A0A087X0R7 540 aa7.14□□□□□ -1.27
LINC00504-201ENST00000505089 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.14□□□□□ -1.27
LINC00504-201ENST00000505089 CSRNP3Q8WYN3 585 aa7.13□□□□□ -1.27
LINC00504-201ENST00000505089 TRIM44Q96DX7 344 aaPredicted RBP7.13□□□□□ -1.27
LINC00504-201ENST00000505089 ZNF777Q9ULD5 760 aaPredicted RBP7.12□□□□□ -1.27
LINC00504-201ENST00000505089 FBLN2P98095 1184 aa7.1□□□□□ -1.27
LINC00504-201ENST00000505089 LAS1LQ9Y4W2 734 aaKnown RBP7.1□□□□□ -1.27
LINC00504-201ENST00000505089 ERICH6BQ5W0A0 696 aa7.09□□□□□ -1.28
LINC00504-201ENST00000505089 SUPT16HQ9Y5B9 1047 aaKnown RBP7.08□□□□□ -1.28
LINC00504-201ENST00000505089 NAP1L5Q96NT1 182 aaPredicted RBP7.08□□□□□ -1.28
LINC00504-201ENST00000505089 TNNT2P45379 298 aaPredicted RBP7.07□□□□□ -1.28
LINC00504-201ENST00000505089 POTEDQ86YR6 584 aa7.07□□□□□ -1.28
LINC00504-201ENST00000505089 PABPN1Q86U42 306 aaKnown RBP eCLIP7.06□□□□□ -1.28
LINC00504-201ENST00000505089 CHGAP10645 457 aaKnown RBP7.05□□□□□ -1.28
LINC00504-201ENST00000505089 NCLP19338 710 aaKnown RBP7.05□□□□□ -1.28
LINC00504-201ENST00000505089 WDR43Q15061 677 aaKnown RBP eCLIP7.05□□□□□ -1.28
LINC00504-201ENST00000505089 CHIC2Q9UKJ5 165 aa7.05□□□□□ -1.28
LINC00504-201ENST00000505089 DNTTIP2Q5QJE6 756 aaKnown RBP7.05□□□□□ -1.28
LINC00504-201ENST00000505089 BECN1Q14457 450 aa7.05□□□□□ -1.28
LINC00504-201ENST00000505089 DDRGK1Q96HY6 314 aa7.04□□□□□ -1.28
LINC00504-201ENST00000505089 TPRNQ4KMQ1 711 aa7.04□□□□□ -1.28
LINC00504-201ENST00000505089 PTMAP06454 111 aaKnown RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms