RNA–Protein interactions for RNA: ENST00000505089.6

LINC00504-201, long intergenic non-protein coding RNA 504, humanhuman

TSL 2 BASIC

Gene LINC00504, Length 4,672 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00504-201ENST00000505089 DCAF8L2P0C7V8 631 aa8.95□□□□□ -0.98
LINC00504-201ENST00000505089 SUPT5HO00267 1087 aaKnown RBP8.69□□□□□ -1.02
LINC00504-201ENST00000505089 PELP1Q8IZL8 1130 aaKnown RBP8.56□□□□□ -1.04
LINC00504-201ENST00000505089 EHMT2Q96KQ7 1210 aa8.55□□□□□ -1.04
LINC00504-201ENST00000505089 PCGF6Q9BYE7 350 aa8.39□□□□□ -1.07
LINC00504-201ENST00000505089 SHROOM4Q9ULL8 1493 aa8.38□□□□□ -1.07
LINC00504-201ENST00000505089 TTBK1Q5TCY1 1321 aaPredicted RBP8.29□□□□□ -1.08
LINC00504-201ENST00000505089 ERICH6Q7L0X2 663 aa8.29□□□□□ -1.08
LINC00504-201ENST00000505089 CENPBP07199 599 aaPredicted RBP8.28□□□□□ -1.08
LINC00504-201ENST00000505089 FAM9AQ8IZU1 332 aaPredicted RBP8.25□□□□□ -1.09
LINC00504-201ENST00000505089 APLP2Q06481 763 aa8.22□□□□□ -1.09
LINC00504-201ENST00000505089 MYT1Q01538 1121 aa8.18□□□□□ -1.1
LINC00504-201ENST00000505089 CCER1Q8TC90 406 aaPredicted RBP8.17□□□□□ -1.1
LINC00504-201ENST00000505089 YTHDC1Q96MU7 727 aaKnown RBP8.16□□□□□ -1.1
LINC00504-201ENST00000505089 ZEB1P37275 1124 aaPredicted RBP8.1□□□□□ -1.11
LINC00504-201ENST00000505089 NEFLP07196 543 aa8.06□□□□□ -1.12
LINC00504-201ENST00000505089 RANGAP1P46060 587 aaPredicted RBP8.06□□□□□ -1.12
LINC00504-201ENST00000505089 PPARGC1BQ86YN6 1023 aaKnown RBP7.97□□□□□ -1.13
LINC00504-201ENST00000505089 HRCP23327 699 aa7.94□□□□□ -1.14
LINC00504-201ENST00000505089 TRIM41Q8WV44 630 aa7.94□□□□□ -1.14
LINC00504-201ENST00000505089 NISCHQ9Y2I1 1504 aa7.93□□□□□ -1.14
LINC00504-201ENST00000505089 ATP1B4Q9UN42 357 aaPredicted RBP7.91□□□□□ -1.14
LINC00504-201ENST00000505089 UBTFP17480 764 aaKnown RBP7.88□□□□□ -1.15
LINC00504-201ENST00000505089 TRIM26Q12899 539 aaPredicted RBP7.85□□□□□ -1.15
LINC00504-201ENST00000505089 DAXXQ9UER7 740 aaPredicted RBP7.84□□□□□ -1.15
LINC00504-201ENST00000505089 CNGB1Q14028 1251 aaPredicted RBP7.79□□□□□ -1.16
LINC00504-201ENST00000505089 POLR3GLQ9BT43 218 aa7.77□□□□□ -1.17
LINC00504-201ENST00000505089 RTL5Q5HYW3 569 aaPredicted RBP7.76□□□□□ -1.17
LINC00504-201ENST00000505089 LOC105371045A0A1W2PR82 267 aa7.76□□□□□ -1.17
LINC00504-201ENST00000505089 ITGAEP38570 1179 aa7.76□□□□□ -1.17
LINC00504-201ENST00000505089 DIEXFQ68CQ4 756 aaKnown RBP7.73□□□□□ -1.17
LINC00504-201ENST00000505089 HNRNPUL2Q1KMD3 747 aaKnown RBP7.73□□□□□ -1.17
LINC00504-201ENST00000505089 GTF3C3Q9Y5Q9 886 aa7.72□□□□□ -1.17
LINC00504-201ENST00000505089 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.71□□□□□ -1.18
LINC00504-201ENST00000505089 BCANQ96GW7 911 aa7.7□□□□□ -1.18
LINC00504-201ENST00000505089 ZNF316A6NFI3 1004 aaPredicted RBP7.66□□□□□ -1.18
LINC00504-201ENST00000505089 CLSPNQ9HAW4 1339 aa7.65□□□□□ -1.18
LINC00504-201ENST00000505089 CHIC1Q5VXU3 224 aa7.62□□□□□ -1.19
LINC00504-201ENST00000505089 EIF5BO60841 1220 aaKnown RBP7.56□□□□□ -1.2
LINC00504-201ENST00000505089 CDK11AQ9UQ88 783 aaPredicted RBP7.54□□□□□ -1.2
LINC00504-201ENST00000505089 ACIN1Q9UKV3 1341 aaKnown RBP7.54□□□□□ -1.2
LINC00504-201ENST00000505089 SLC4A1APQ9BWU0 796 aaKnown RBP7.52□□□□□ -1.2
LINC00504-201ENST00000505089 MYT1LQ9UL68 1186 aa7.52□□□□□ -1.21
LINC00504-201ENST00000505089 NEUROD1Q13562 356 aa7.49□□□□□ -1.21
LINC00504-201ENST00000505089 BCL11AQ9H165 835 aa7.47□□□□□ -1.21
LINC00504-201ENST00000505089 ANP32CO43423 234 aa7.46□□□□□ -1.22
LINC00504-201ENST00000505089 NPM2Q86SE8 214 aaKnown RBP7.45□□□□□ -1.22
LINC00504-201ENST00000505089 FAM50AQ14320 339 aaKnown RBP7.44□□□□□ -1.22
LINC00504-201ENST00000505089 ANP32AP39687 249 aaKnown RBP7.43□□□□□ -1.22
LINC00504-201ENST00000505089 ZNF326Q5BKZ1 582 aaKnown RBP7.42□□□□□ -1.22
LINC00504-201ENST00000505089 TRIM52Q96A61 297 aa7.41□□□□□ -1.22
LINC00504-201ENST00000505089 FKBP8Q14318 412 aa7.4□□□□□ -1.22
LINC00504-201ENST00000505089 NBR1Q14596 966 aa7.38□□□□□ -1.23
LINC00504-201ENST00000505089 ZBTB47Q9UFB7 747 aaPredicted RBP7.37□□□□□ -1.23
LINC00504-201ENST00000505089 SCAF1Q9H7N4 1312 aaKnown RBP7.36□□□□□ -1.23
LINC00504-201ENST00000505089 CANXP27824 592 aaKnown RBP7.35□□□□□ -1.23
LINC00504-201ENST00000505089 ARXQ96QS3 562 aa7.34□□□□□ -1.23
LINC00504-201ENST00000505089 GLIPR1L2Q4G1C9 344 aa7.34□□□□□ -1.23
LINC00504-201ENST00000505089 HNRNPUQ00839 825 aaKnown RBP eCLIP7.31□□□□□ -1.24
LINC00504-201ENST00000505089 ANP32BQ92688 251 aaKnown RBP7.3□□□□□ -1.24
LINC00504-201ENST00000505089 SLC24A1O60721 1099 aa7.29□□□□□ -1.24
LINC00504-201ENST00000505089 HSP90AA1P07900 732 aaKnown RBP7.29□□□□□ -1.24
LINC00504-201ENST00000505089 SALL2Q9Y467 1007 aaPredicted RBP7.28□□□□□ -1.24
LINC00504-201ENST00000505089 DDX10Q13206 875 aaKnown RBP7.27□□□□□ -1.25
LINC00504-201ENST00000505089 FAM9BQ8IZU0 186 aa7.27□□□□□ -1.25
LINC00504-201ENST00000505089 IRX6P78412 446 aaPredicted RBP7.26□□□□□ -1.25
LINC00504-201ENST00000505089 CCDC136Q96JN2 1154 aa7.25□□□□□ -1.25
LINC00504-201ENST00000505089 UPF2Q9HAU5 1272 aaKnown RBP7.23□□□□□ -1.25
LINC00504-201ENST00000505089 MIER1Q8N108 512 aa7.22□□□□□ -1.25
LINC00504-201ENST00000505089 NEFMP07197 916 aa7.21□□□□□ -1.26
LINC00504-201ENST00000505089 RTN4Q9NQC3 1192 aaKnown RBP7.21□□□□□ -1.26
LINC00504-201ENST00000505089 ARID3CA6NKF2 412 aa7.2□□□□□ -1.26
LINC00504-201ENST00000505089 ANP32EQ9BTT0 268 aa7.2□□□□□ -1.26
LINC00504-201ENST00000505089 P3H3Q8IVL6 736 aa7.19□□□□□ -1.26
LINC00504-201ENST00000505089 HIRIP3Q9BW71 556 aaPredicted RBP7.17□□□□□ -1.26
LINC00504-201ENST00000505089 TMC1Q8TDI8 760 aa7.15□□□□□ -1.26
LINC00504-201ENST00000505089 MRS2Q9HD23 443 aa7.15□□□□□ -1.26
LINC00504-201ENST00000505089 TONSLQ96HA7 1378 aa7.15□□□□□ -1.26
LINC00504-201ENST00000505089 SENP3-EIF4A1A0A087X0R7 540 aa7.14□□□□□ -1.27
LINC00504-201ENST00000505089 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.14□□□□□ -1.27
LINC00504-201ENST00000505089 CSRNP3Q8WYN3 585 aa7.13□□□□□ -1.27
LINC00504-201ENST00000505089 TRIM44Q96DX7 344 aaPredicted RBP7.13□□□□□ -1.27
LINC00504-201ENST00000505089 ZNF777Q9ULD5 760 aaPredicted RBP7.12□□□□□ -1.27
LINC00504-201ENST00000505089 FBLN2P98095 1184 aa7.1□□□□□ -1.27
LINC00504-201ENST00000505089 LAS1LQ9Y4W2 734 aaKnown RBP7.1□□□□□ -1.27
LINC00504-201ENST00000505089 ERICH6BQ5W0A0 696 aa7.09□□□□□ -1.28
LINC00504-201ENST00000505089 SUPT16HQ9Y5B9 1047 aaKnown RBP7.08□□□□□ -1.28
LINC00504-201ENST00000505089 NAP1L5Q96NT1 182 aaPredicted RBP7.08□□□□□ -1.28
LINC00504-201ENST00000505089 TNNT2P45379 298 aaPredicted RBP7.07□□□□□ -1.28
LINC00504-201ENST00000505089 POTEDQ86YR6 584 aa7.07□□□□□ -1.28
LINC00504-201ENST00000505089 PABPN1Q86U42 306 aaKnown RBP eCLIP7.06□□□□□ -1.28
LINC00504-201ENST00000505089 CHGAP10645 457 aaKnown RBP7.05□□□□□ -1.28
LINC00504-201ENST00000505089 NCLP19338 710 aaKnown RBP7.05□□□□□ -1.28
LINC00504-201ENST00000505089 WDR43Q15061 677 aaKnown RBP eCLIP7.05□□□□□ -1.28
LINC00504-201ENST00000505089 CHIC2Q9UKJ5 165 aa7.05□□□□□ -1.28
LINC00504-201ENST00000505089 DNTTIP2Q5QJE6 756 aaKnown RBP7.05□□□□□ -1.28
LINC00504-201ENST00000505089 BECN1Q14457 450 aa7.05□□□□□ -1.28
LINC00504-201ENST00000505089 DDRGK1Q96HY6 314 aa7.04□□□□□ -1.28
LINC00504-201ENST00000505089 TPRNQ4KMQ1 711 aa7.04□□□□□ -1.28
LINC00504-201ENST00000505089 PTMAP06454 111 aaKnown RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms