RNA–Protein interactions for RNA: ENST00000505082.1

TNPO1-203, Transcript of transportin 1, humanhuman

TSL 4

Gene TNPO1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-203ENST00000505082 AEBP2Q6ZN18 517 aaPredicted RBP18.99■□□□□ 0.63
TNPO1-203ENST00000505082 CHIC1Q5VXU3 224 aa18.41■□□□□ 0.54
TNPO1-203ENST00000505082 SENP3Q9H4L4 574 aaPredicted RBP16.2■□□□□ 0.18
TNPO1-203ENST00000505082 PHF23Q9BUL5 403 aaPredicted RBP16.14■□□□□ 0.17
TNPO1-203ENST00000505082 FOXD1Q16676 465 aa15.03■□□□□ -0
TNPO1-203ENST00000505082 PLPPR3Q6T4P5 718 aa14.92□□□□□ -0.02
TNPO1-203ENST00000505082 ADRA2BP18089 450 aa14.33□□□□□ -0.12
TNPO1-203ENST00000505082 PPP6R1Q9UPN7 881 aa14.31□□□□□ -0.12
TNPO1-203ENST00000505082 PIAS4Q8N2W9 510 aaPredicted RBP14.19□□□□□ -0.14
TNPO1-203ENST00000505082 MSH5O43196 834 aa13.97□□□□□ -0.17
TNPO1-203ENST00000505082 SCAF1Q9H7N4 1312 aaKnown RBP13.17□□□□□ -0.3
TNPO1-203ENST00000505082 PPP4R3CPQ6ZMV5 832 aa13.11□□□□□ -0.31
TNPO1-203ENST00000505082 MAPK8IP2Q13387 824 aaPredicted RBP13.04□□□□□ -0.32
TNPO1-203ENST00000505082 POTEDQ86YR6 584 aa12.99□□□□□ -0.33
TNPO1-203ENST00000505082 DMRT2Q9Y5R5 561 aa12.88□□□□□ -0.35
TNPO1-203ENST00000505082 CNKSR2Q8WXI2 1034 aa12.78□□□□□ -0.36
TNPO1-203ENST00000505082 NCBP3Q53F19 620 aaKnown RBP12.77□□□□□ -0.37
TNPO1-203ENST00000505082 KCNA4P22459 653 aa12.6□□□□□ -0.39
TNPO1-203ENST00000505082 RNF216Q9NWF9 866 aaPredicted RBP12.56□□□□□ -0.4
TNPO1-203ENST00000505082 NPM3O75607 178 aaKnown RBP12.52□□□□□ -0.41
TNPO1-203ENST00000505082 HOXD11P31277 338 aaPredicted RBP12.52□□□□□ -0.41
TNPO1-203ENST00000505082 DCAF8L1A6NGE4 600 aa12.46□□□□□ -0.41
TNPO1-203ENST00000505082 DNAJC5BQ9UF47 199 aa12.08□□□□□ -0.48
TNPO1-203ENST00000505082 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.04□□□□□ -0.481e-8■□□□□ 9
TNPO1-203ENST00000505082 SLC4A1APQ9BWU0 796 aaKnown RBP12.01□□□□□ -0.49
TNPO1-203ENST00000505082 RNF39Q9H2S5 420 aa11.91□□□□□ -0.5
TNPO1-203ENST00000505082 SLC4A2P04920 1241 aa11.83□□□□□ -0.52
TNPO1-203ENST00000505082 CACNB1Q02641 598 aaPredicted RBP11.81□□□□□ -0.52
TNPO1-203ENST00000505082 C1QBPQ07021 282 aaKnown RBP11.79□□□□□ -0.52
TNPO1-203ENST00000505082 U3KPZ7 1027 aaPredicted RBP11.75□□□□□ -0.53
TNPO1-203ENST00000505082 FOXD4L1Q9NU39 408 aa11.67□□□□□ -0.54
TNPO1-203ENST00000505082 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.61□□□□□ -0.55
TNPO1-203ENST00000505082 HNRNPUL2Q1KMD3 747 aaKnown RBP11.61□□□□□ -0.55
TNPO1-203ENST00000505082 MYCNP04198 464 aaPredicted RBP11.6□□□□□ -0.55
TNPO1-203ENST00000505082 ZBTB22O15209 634 aa11.55□□□□□ -0.56
TNPO1-203ENST00000505082 APLP2Q06481 763 aa11.55□□□□□ -0.56
TNPO1-203ENST00000505082 SAMD1Q6SPF0 538 aaPredicted RBP11.54□□□□□ -0.56
TNPO1-203ENST00000505082 CAPN15O75808 1086 aa11.52□□□□□ -0.57
TNPO1-203ENST00000505082 EHMT2Q96KQ7 1210 aa11.51□□□□□ -0.57
TNPO1-203ENST00000505082 SPINK5Q9NQ38 1064 aaPredicted RBP11.49□□□□□ -0.57
TNPO1-203ENST00000505082 TRHP20396 242 aaPredicted RBP11.42□□□□□ -0.58
TNPO1-203ENST00000505082 ZNF219Q9P2Y4 722 aaPredicted RBP11.38□□□□□ -0.59
TNPO1-203ENST00000505082 CSRNP3Q8WYN3 585 aa11.36□□□□□ -0.59
TNPO1-203ENST00000505082 DSG3P32926 999 aa11.28□□□□□ -0.6
TNPO1-203ENST00000505082 ABCB7O75027 752 aa11.27□□□□□ -0.61
TNPO1-203ENST00000505082 ATXN8OSP0DMR3 200 aa11.25□□□□□ -0.61
TNPO1-203ENST00000505082 ATF5Q9Y2D1 282 aaPredicted RBP11.25□□□□□ -0.61
TNPO1-203ENST00000505082 POLA2Q14181 598 aa11.16□□□□□ -0.62
TNPO1-203ENST00000505082 ZBTB12Q9Y330 459 aaPredicted RBP10.98□□□□□ -0.65
TNPO1-203ENST00000505082 FBLN2P98095 1184 aa10.88□□□□□ -0.67
TNPO1-203ENST00000505082 RBM42Q9BTD8 480 aaKnown RBP10.81□□□□□ -0.68
TNPO1-203ENST00000505082 OSCARQ8IYS5 282 aa10.78□□□□□ -0.68
TNPO1-203ENST00000505082 MKRN4PQ13434 485 aaPredicted RBP10.75□□□□□ -0.69
TNPO1-203ENST00000505082 SPDYE2BA6NHP3 402 aa10.64□□□□□ -0.71
TNPO1-203ENST00000505082 SPDYE6P0CI01 402 aa10.64□□□□□ -0.71
TNPO1-203ENST00000505082 SPDYE2Q495Y8 402 aa10.64□□□□□ -0.71
TNPO1-203ENST00000505082 AKT1S1Q96B36 256 aa10.61□□□□□ -0.71
TNPO1-203ENST00000505082 ZNF692Q9BU19 519 aaPredicted RBP10.61□□□□□ -0.71
TNPO1-203ENST00000505082 REM2Q8IYK8 340 aaPredicted RBP10.51□□□□□ -0.73
TNPO1-203ENST00000505082 SSUH2Q9Y2M2 353 aa10.5□□□□□ -0.73
TNPO1-203ENST00000505082 SPDYE4A6NLX3 237 aa10.49□□□□□ -0.73
TNPO1-203ENST00000505082 PABPN1Q86U42 306 aaKnown RBP eCLIP10.45□□□□□ -0.74
TNPO1-203ENST00000505082 CHRDL2Q6WN34 429 aa10.41□□□□□ -0.74
TNPO1-203ENST00000505082 CLEC11AQ9Y240 323 aa10.4□□□□□ -0.74
TNPO1-203ENST00000505082 PITPNM1O00562 1244 aa10.39□□□□□ -0.75
TNPO1-203ENST00000505082 SPDYE1Q8NFV5 336 aaPredicted RBP10.39□□□□□ -0.75
TNPO1-203ENST00000505082 FKBP8Q14318 412 aa10.35□□□□□ -0.75
TNPO1-203ENST00000505082 POTEHQ6S545 545 aa10.28□□□□□ -0.76
TNPO1-203ENST00000505082 PRR29P0C7W0 189 aa10.26□□□□□ -0.77
TNPO1-203ENST00000505082 STAG3Q9UJ98 1225 aa10.26□□□□□ -0.77
TNPO1-203ENST00000505082 PIP4P2Q8N4L2 257 aa10.22□□□□□ -0.77
TNPO1-203ENST00000505082 FXR2P51116 673 aaKnown RBP eCLIP10.2□□□□□ -0.786e-7■■■■□ 25.9
TNPO1-203ENST00000505082 PROM2Q8N271 834 aa10.19□□□□□ -0.78
TNPO1-203ENST00000505082 PRKAR2AP13861 404 aaKnown RBP10.16□□□□□ -0.78
TNPO1-203ENST00000505082 CHADLQ6NUI6 762 aa10.12□□□□□ -0.79
TNPO1-203ENST00000505082 FBXO3Q9UK99 471 aa10.05□□□□□ -0.8
TNPO1-203ENST00000505082 MIER1Q8N108 512 aa10.02□□□□□ -0.81
TNPO1-203ENST00000505082 CREBZFQ9NS37 354 aa10.02□□□□□ -0.81
TNPO1-203ENST00000505082 HAX1O00165 279 aa10.01□□□□□ -0.81
TNPO1-203ENST00000505082 PLEKHG5O94827 1062 aa10.01□□□□□ -0.81
TNPO1-203ENST00000505082 PLCD3Q8N3E9 789 aa9.99□□□□□ -0.81
TNPO1-203ENST00000505082 FARP1Q9Y4F1 1045 aaPredicted RBP9.99□□□□□ -0.81
TNPO1-203ENST00000505082 NPM1P06748 294 aaKnown RBP eCLIP9.93□□□□□ -0.82
TNPO1-203ENST00000505082 VASPP50552 380 aaPredicted RBP9.88□□□□□ -0.83
TNPO1-203ENST00000505082 ZBTB47Q9UFB7 747 aaPredicted RBP9.88□□□□□ -0.83
TNPO1-203ENST00000505082 C19orf67A6NJJ6 358 aa9.87□□□□□ -0.83
TNPO1-203ENST00000505082 CD44P16070 742 aaKnown RBP9.86□□□□□ -0.83
TNPO1-203ENST00000505082 MNX1P50219 401 aaPredicted RBP9.86□□□□□ -0.83
TNPO1-203ENST00000505082 KLHL34Q8N239 644 aa9.84□□□□□ -0.83
TNPO1-203ENST00000505082 PAK3O75914 559 aaPredicted RBP9.83□□□□□ -0.84
TNPO1-203ENST00000505082 EVX2Q03828 476 aa9.82□□□□□ -0.84
TNPO1-203ENST00000505082 SP7Q8TDD2 431 aaPredicted RBP9.8□□□□□ -0.84
TNPO1-203ENST00000505082 ZRANB1Q9UGI0 708 aa9.79□□□□□ -0.84
TNPO1-203ENST00000505082 TSPYL2Q9H2G4 693 aaPredicted RBP9.75□□□□□ -0.85
TNPO1-203ENST00000505082 IFNLR1Q8IU57 520 aaPredicted RBP9.71□□□□□ -0.86
TNPO1-203ENST00000505082 RASEFQ8IZ41 740 aa9.71□□□□□ -0.86
TNPO1-203ENST00000505082 NUBP1P53384 320 aa9.69□□□□□ -0.86
TNPO1-203ENST00000505082 ZNF579Q8NAF0 562 aaKnown RBP9.68□□□□□ -0.86
TNPO1-203ENST00000505082 FAM212AQ96EL1 285 aa9.68□□□□□ -0.86
TNPO1-203ENST00000505082 DCAF8Q5TAQ9 597 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms