RNA–Protein interactions for RNA: ENST00000504874.1

AC108935.1-201, humanhuman

TSL 2 BASIC

Gene AC108935.1, Length 518 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC108935.1-201ENST00000504874 AEBP2Q6ZN18 517 aaPredicted RBP26.21■■□□□ 1.79
AC108935.1-201ENST00000504874 CHIC1Q5VXU3 224 aa25.4■■□□□ 1.66
AC108935.1-201ENST00000504874 PHF23Q9BUL5 403 aaPredicted RBP22.4■■□□□ 1.18
AC108935.1-201ENST00000504874 SENP3Q9H4L4 574 aaPredicted RBP22.14■■□□□ 1.13
AC108935.1-201ENST00000504874 FOXD1Q16676 465 aa20.64■□□□□ 0.89
AC108935.1-201ENST00000504874 PLPPR3Q6T4P5 718 aa20.49■□□□□ 0.87
AC108935.1-201ENST00000504874 PPP6R1Q9UPN7 881 aa19.81■□□□□ 0.76
AC108935.1-201ENST00000504874 ADRA2BP18089 450 aa19.69■□□□□ 0.74
AC108935.1-201ENST00000504874 PIAS4Q8N2W9 510 aaPredicted RBP19.31■□□□□ 0.68
AC108935.1-201ENST00000504874 MSH5O43196 834 aa19■□□□□ 0.63
AC108935.1-201ENST00000504874 PPP4R3CPQ6ZMV5 832 aa18.06■□□□□ 0.48
AC108935.1-201ENST00000504874 MAPK8IP2Q13387 824 aaPredicted RBP17.94■□□□□ 0.46
AC108935.1-201ENST00000504874 SCAF1Q9H7N4 1312 aaKnown RBP17.92■□□□□ 0.46
AC108935.1-201ENST00000504874 POTEDQ86YR6 584 aa17.82■□□□□ 0.44
AC108935.1-201ENST00000504874 DMRT2Q9Y5R5 561 aa17.71■□□□□ 0.43
AC108935.1-201ENST00000504874 CNKSR2Q8WXI2 1034 aa17.58■□□□□ 0.4
AC108935.1-201ENST00000504874 KCNA4P22459 653 aa17.49■□□□□ 0.39
AC108935.1-201ENST00000504874 NCBP3Q53F19 620 aaKnown RBP17.45■□□□□ 0.38
AC108935.1-201ENST00000504874 NPM3O75607 178 aaKnown RBP17.32■□□□□ 0.36
AC108935.1-201ENST00000504874 HOXD11P31277 338 aaPredicted RBP17.32■□□□□ 0.36
AC108935.1-201ENST00000504874 RNF216Q9NWF9 866 aaPredicted RBP17.3■□□□□ 0.36
AC108935.1-201ENST00000504874 DNAJC5BQ9UF47 199 aa17■□□□□ 0.31
AC108935.1-201ENST00000504874 DCAF8L1A6NGE4 600 aa16.73■□□□□ 0.27
AC108935.1-201ENST00000504874 SLC4A1APQ9BWU0 796 aaKnown RBP16.55■□□□□ 0.24
AC108935.1-201ENST00000504874 SLC4A2P04920 1241 aa16.45■□□□□ 0.22
AC108935.1-201ENST00000504874 RNF39Q9H2S5 420 aa16.35■□□□□ 0.21
AC108935.1-201ENST00000504874 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.33■□□□□ 0.2
AC108935.1-201ENST00000504874 U3KPZ7 1027 aaPredicted RBP16.17■□□□□ 0.18
AC108935.1-201ENST00000504874 ZBTB22O15209 634 aa16.16■□□□□ 0.18
AC108935.1-201ENST00000504874 C1QBPQ07021 282 aaKnown RBP16.1■□□□□ 0.17
AC108935.1-201ENST00000504874 FOXD4L1Q9NU39 408 aa16.09■□□□□ 0.17
AC108935.1-201ENST00000504874 MYCNP04198 464 aaPredicted RBP15.94■□□□□ 0.14
AC108935.1-201ENST00000504874 CSRNP3Q8WYN3 585 aa15.92■□□□□ 0.14
AC108935.1-201ENST00000504874 CACNB1Q02641 598 aaPredicted RBP15.9■□□□□ 0.14
AC108935.1-201ENST00000504874 EHMT2Q96KQ7 1210 aa15.85■□□□□ 0.13
AC108935.1-201ENST00000504874 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.81■□□□□ 0.12
AC108935.1-201ENST00000504874 HNRNPUL2Q1KMD3 747 aaKnown RBP15.81■□□□□ 0.12
AC108935.1-201ENST00000504874 SAMD1Q6SPF0 538 aaPredicted RBP15.77■□□□□ 0.12
AC108935.1-201ENST00000504874 SPINK5Q9NQ38 1064 aaPredicted RBP15.75■□□□□ 0.11
AC108935.1-201ENST00000504874 ATF5Q9Y2D1 282 aaPredicted RBP15.63■□□□□ 0.09
AC108935.1-201ENST00000504874 APLP2Q06481 763 aa15.62■□□□□ 0.09
AC108935.1-201ENST00000504874 ATXN8OSP0DMR3 200 aa15.6■□□□□ 0.09
AC108935.1-201ENST00000504874 CAPN15O75808 1086 aa15.57■□□□□ 0.08
AC108935.1-201ENST00000504874 DSG3P32926 999 aa15.5■□□□□ 0.07
AC108935.1-201ENST00000504874 ZNF219Q9P2Y4 722 aaPredicted RBP15.5■□□□□ 0.07
AC108935.1-201ENST00000504874 TRHP20396 242 aaPredicted RBP15.48■□□□□ 0.07
AC108935.1-201ENST00000504874 ABCB7O75027 752 aa15.3■□□□□ 0.04
AC108935.1-201ENST00000504874 POLA2Q14181 598 aa15.27■□□□□ 0.04
AC108935.1-201ENST00000504874 MKRN4PQ13434 485 aaPredicted RBP14.95□□□□□ -0.02
AC108935.1-201ENST00000504874 ZBTB12Q9Y330 459 aaPredicted RBP14.94□□□□□ -0.02
AC108935.1-201ENST00000504874 FBLN2P98095 1184 aa14.79□□□□□ -0.04
AC108935.1-201ENST00000504874 OSCARQ8IYS5 282 aa14.72□□□□□ -0.05
AC108935.1-201ENST00000504874 RBM42Q9BTD8 480 aaKnown RBP14.65□□□□□ -0.06
AC108935.1-201ENST00000504874 SPDYE2BA6NHP3 402 aa14.59□□□□□ -0.07
AC108935.1-201ENST00000504874 SPDYE6P0CI01 402 aa14.59□□□□□ -0.07
AC108935.1-201ENST00000504874 SPDYE2Q495Y8 402 aa14.59□□□□□ -0.07
AC108935.1-201ENST00000504874 SSUH2Q9Y2M2 353 aa14.53□□□□□ -0.08
AC108935.1-201ENST00000504874 AKT1S1Q96B36 256 aa14.51□□□□□ -0.09
AC108935.1-201ENST00000504874 ZNF692Q9BU19 519 aaPredicted RBP14.47□□□□□ -0.09
AC108935.1-201ENST00000504874 SPDYE4A6NLX3 237 aa14.42□□□□□ -0.1
AC108935.1-201ENST00000504874 REM2Q8IYK8 340 aaPredicted RBP14.39□□□□□ -0.11
AC108935.1-201ENST00000504874 PROM2Q8N271 834 aa14.34□□□□□ -0.11
AC108935.1-201ENST00000504874 PABPN1Q86U42 306 aaKnown RBP eCLIP14.28□□□□□ -0.12
AC108935.1-201ENST00000504874 FKBP8Q14318 412 aa14.27□□□□□ -0.13
AC108935.1-201ENST00000504874 PITPNM1O00562 1244 aa14.21□□□□□ -0.13
AC108935.1-201ENST00000504874 CHRDL2Q6WN34 429 aa14.15□□□□□ -0.14
AC108935.1-201ENST00000504874 SPDYE1Q8NFV5 336 aaPredicted RBP14.15□□□□□ -0.14
AC108935.1-201ENST00000504874 FXR2P51116 673 aaKnown RBP eCLIP14.04□□□□□ -0.16
AC108935.1-201ENST00000504874 CLEC11AQ9Y240 323 aa14.03□□□□□ -0.16
AC108935.1-201ENST00000504874 STAG3Q9UJ98 1225 aa14.01□□□□□ -0.17
AC108935.1-201ENST00000504874 PIP4P2Q8N4L2 257 aa13.98□□□□□ -0.17
AC108935.1-201ENST00000504874 PRR29P0C7W0 189 aa13.93□□□□□ -0.18
AC108935.1-201ENST00000504874 POTEHQ6S545 545 aa13.91□□□□□ -0.18
AC108935.1-201ENST00000504874 CREBZFQ9NS37 354 aa13.84□□□□□ -0.19
AC108935.1-201ENST00000504874 PRKAR2AP13861 404 aaKnown RBP13.81□□□□□ -0.2
AC108935.1-201ENST00000504874 CHADLQ6NUI6 762 aa13.79□□□□□ -0.2
AC108935.1-201ENST00000504874 FBXO3Q9UK99 471 aa13.79□□□□□ -0.2
AC108935.1-201ENST00000504874 MNX1P50219 401 aaPredicted RBP13.75□□□□□ -0.21
AC108935.1-201ENST00000504874 FARP1Q9Y4F1 1045 aaPredicted RBP13.67□□□□□ -0.22
AC108935.1-201ENST00000504874 VASPP50552 380 aaPredicted RBP13.65□□□□□ -0.22
AC108935.1-201ENST00000504874 MIER1Q8N108 512 aa13.64□□□□□ -0.23
AC108935.1-201ENST00000504874 PLCD3Q8N3E9 789 aa13.56□□□□□ -0.24
AC108935.1-201ENST00000504874 C19orf67A6NJJ6 358 aa13.55□□□□□ -0.24
AC108935.1-201ENST00000504874 IFNLR1Q8IU57 520 aaPredicted RBP13.53□□□□□ -0.24
AC108935.1-201ENST00000504874 EVX2Q03828 476 aa13.51□□□□□ -0.25
AC108935.1-201ENST00000504874 PLEKHG5O94827 1062 aa13.48□□□□□ -0.25
AC108935.1-201ENST00000504874 NPM1P06748 294 aaKnown RBP eCLIP13.47□□□□□ -0.25
AC108935.1-201ENST00000504874 HAX1O00165 279 aa13.46□□□□□ -0.25
AC108935.1-201ENST00000504874 NUBP1P53384 320 aa13.45□□□□□ -0.26
AC108935.1-201ENST00000504874 ZBTB47Q9UFB7 747 aaPredicted RBP13.44□□□□□ -0.26
AC108935.1-201ENST00000504874 CD44P16070 742 aaKnown RBP13.38□□□□□ -0.27
AC108935.1-201ENST00000504874 RASEFQ8IZ41 740 aa13.38□□□□□ -0.27
AC108935.1-201ENST00000504874 KLHL34Q8N239 644 aa13.33□□□□□ -0.28
AC108935.1-201ENST00000504874 SPOCK2Q92563 424 aa13.29□□□□□ -0.28
AC108935.1-201ENST00000504874 ZNF579Q8NAF0 562 aaKnown RBP13.28□□□□□ -0.28
AC108935.1-201ENST00000504874 SP7Q8TDD2 431 aaPredicted RBP13.28□□□□□ -0.28
AC108935.1-201ENST00000504874 ZRANB1Q9UGI0 708 aa13.28□□□□□ -0.28
AC108935.1-201ENST00000504874 CCDC61Q9Y6R9 512 aa13.28□□□□□ -0.28
AC108935.1-201ENST00000504874 TSPYL2Q9H2G4 693 aaPredicted RBP13.25□□□□□ -0.29
AC108935.1-201ENST00000504874 PAK3O75914 559 aaPredicted RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms