RNA–Protein interactions for RNA: ENST00000504683.1

ABCE1-205, Transcript of ATP binding cassette subfamily E member 1, humanhuman

TSL 2

Gene ABCE1, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCE1-205ENST00000504683 AEBP2Q6ZN18 517 aaPredicted RBP22.93■■□□□ 1.26
ABCE1-205ENST00000504683 CHIC1Q5VXU3 224 aa21.69■■□□□ 1.06
ABCE1-205ENST00000504683 SENP3Q9H4L4 574 aaPredicted RBP19.91■□□□□ 0.78
ABCE1-205ENST00000504683 PHF23Q9BUL5 403 aaPredicted RBP19.46■□□□□ 0.71
ABCE1-205ENST00000504683 FOXD1Q16676 465 aa18.49■□□□□ 0.55
ABCE1-205ENST00000504683 POTEDQ86YR6 584 aa18.32■□□□□ 0.52
ABCE1-205ENST00000504683 MSH5O43196 834 aa17.76■□□□□ 0.43
ABCE1-205ENST00000504683 PIAS4Q8N2W9 510 aaPredicted RBP17.17■□□□□ 0.34
ABCE1-205ENST00000504683 PLPPR3Q6T4P5 718 aa16.77■□□□□ 0.28
ABCE1-205ENST00000504683 PPP6R1Q9UPN7 881 aa16.68■□□□□ 0.26
ABCE1-205ENST00000504683 ADRA2BP18089 450 aa16.62■□□□□ 0.25
ABCE1-205ENST00000504683 DMRT2Q9Y5R5 561 aa15.62■□□□□ 0.09
ABCE1-205ENST00000504683 CACNB1Q02641 598 aaPredicted RBP15.6■□□□□ 0.09
ABCE1-205ENST00000504683 SCAF1Q9H7N4 1312 aaKnown RBP15.51■□□□□ 0.07
ABCE1-205ENST00000504683 MAPK8IP2Q13387 824 aaPredicted RBP15.44■□□□□ 0.06
ABCE1-205ENST00000504683 DCAF8L1A6NGE4 600 aa15.03■□□□□ -0
ABCE1-205ENST00000504683 RNF39Q9H2S5 420 aa14.97□□□□□ -0.01
ABCE1-205ENST00000504683 C1QBPQ07021 282 aaKnown RBP14.82□□□□□ -0.04
ABCE1-205ENST00000504683 HOXD11P31277 338 aaPredicted RBP14.78□□□□□ -0.04
ABCE1-205ENST00000504683 DNAJC5BQ9UF47 199 aa14.55□□□□□ -0.08
ABCE1-205ENST00000504683 PPP4R3CPQ6ZMV5 832 aa14.54□□□□□ -0.08
ABCE1-205ENST00000504683 RNF216Q9NWF9 866 aaPredicted RBP14.53□□□□□ -0.08
ABCE1-205ENST00000504683 CNKSR2Q8WXI2 1034 aa14.49□□□□□ -0.09
ABCE1-205ENST00000504683 POTEHQ6S545 545 aa14.27□□□□□ -0.13
ABCE1-205ENST00000504683 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.13□□□□□ -0.15
ABCE1-205ENST00000504683 NCBP3Q53F19 620 aaKnown RBP13.94□□□□□ -0.18
ABCE1-205ENST00000504683 DSG3P32926 999 aa13.77□□□□□ -0.21
ABCE1-205ENST00000504683 CAPN15O75808 1086 aa13.75□□□□□ -0.21
ABCE1-205ENST00000504683 U3KPZ7 1027 aaPredicted RBP13.64□□□□□ -0.23
ABCE1-205ENST00000504683 SPINK5Q9NQ38 1064 aaPredicted RBP13.61□□□□□ -0.23
ABCE1-205ENST00000504683 NPM3O75607 178 aaKnown RBP13.52□□□□□ -0.25
ABCE1-205ENST00000504683 APLP2Q06481 763 aa13.51□□□□□ -0.25
ABCE1-205ENST00000504683 ZNF219Q9P2Y4 722 aaPredicted RBP13.4□□□□□ -0.26
ABCE1-205ENST00000504683 RBM42Q9BTD8 480 aaKnown RBP13.35□□□□□ -0.27
ABCE1-205ENST00000504683 TRHP20396 242 aaPredicted RBP13.34□□□□□ -0.27
ABCE1-205ENST00000504683 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.27□□□□□ -0.29
ABCE1-205ENST00000504683 HNRNPUL2Q1KMD3 747 aaKnown RBP13.27□□□□□ -0.29
ABCE1-205ENST00000504683 ABCB7O75027 752 aa13.26□□□□□ -0.29
ABCE1-205ENST00000504683 CHRDL2Q6WN34 429 aa13.19□□□□□ -0.3
ABCE1-205ENST00000504683 KCNA4P22459 653 aa13.12□□□□□ -0.31
ABCE1-205ENST00000504683 SAMD1Q6SPF0 538 aaPredicted RBP13.1□□□□□ -0.31
ABCE1-205ENST00000504683 SP7Q8TDD2 431 aaPredicted RBP13.07□□□□□ -0.32
ABCE1-205ENST00000504683 SLC4A2P04920 1241 aa13.04□□□□□ -0.32
ABCE1-205ENST00000504683 AKT1S1Q96B36 256 aa12.83□□□□□ -0.36
ABCE1-205ENST00000504683 POLA2Q14181 598 aa12.82□□□□□ -0.36
ABCE1-205ENST00000504683 HAX1O00165 279 aa12.72□□□□□ -0.37
ABCE1-205ENST00000504683 ZBTB12Q9Y330 459 aaPredicted RBP12.68□□□□□ -0.38
ABCE1-205ENST00000504683 PIP4P2Q8N4L2 257 aa12.67□□□□□ -0.38
ABCE1-205ENST00000504683 MYCNP04198 464 aaPredicted RBP12.64□□□□□ -0.39
ABCE1-205ENST00000504683 REM2Q8IYK8 340 aaPredicted RBP12.62□□□□□ -0.39
ABCE1-205ENST00000504683 FXR2P51116 673 aaKnown RBP eCLIP12.53□□□□□ -0.4
ABCE1-205ENST00000504683 SLC4A1APQ9BWU0 796 aaKnown RBP12.48□□□□□ -0.41
ABCE1-205ENST00000504683 PITPNM1O00562 1244 aa12.45□□□□□ -0.42
ABCE1-205ENST00000504683 OSCARQ8IYS5 282 aa12.38□□□□□ -0.43
ABCE1-205ENST00000504683 EVX2Q03828 476 aa12.31□□□□□ -0.44
ABCE1-205ENST00000504683 LHX8Q68G74 356 aa12.27□□□□□ -0.45
ABCE1-205ENST00000504683 ATF5Q9Y2D1 282 aaPredicted RBP12.19□□□□□ -0.46
ABCE1-205ENST00000504683 PRKAR2AP13861 404 aaKnown RBP12.17□□□□□ -0.46
ABCE1-205ENST00000504683 SPDYE2BA6NHP3 402 aa12.15□□□□□ -0.46
ABCE1-205ENST00000504683 C19orf67A6NJJ6 358 aa12.15□□□□□ -0.46
ABCE1-205ENST00000504683 SPDYE6P0CI01 402 aa12.15□□□□□ -0.46
ABCE1-205ENST00000504683 SPDYE2Q495Y8 402 aa12.15□□□□□ -0.46
ABCE1-205ENST00000504683 GABBR2O75899 941 aa12.13□□□□□ -0.47
ABCE1-205ENST00000504683 SPDYE1Q8NFV5 336 aaPredicted RBP12.13□□□□□ -0.47
ABCE1-205ENST00000504683 FOXD4L1Q9NU39 408 aa12.1□□□□□ -0.47
ABCE1-205ENST00000504683 ZBTB22O15209 634 aa12.06□□□□□ -0.48
ABCE1-205ENST00000504683 CLEC11AQ9Y240 323 aa12.06□□□□□ -0.48
ABCE1-205ENST00000504683 FBLN2P98095 1184 aa12.04□□□□□ -0.48
ABCE1-205ENST00000504683 PLSCR2Q9NRY7 297 aa12.03□□□□□ -0.48
ABCE1-205ENST00000504683 EHMT2Q96KQ7 1210 aa12.02□□□□□ -0.49
ABCE1-205ENST00000504683 CLCN6P51797 869 aa11.97□□□□□ -0.49
ABCE1-205ENST00000504683 CSRNP3Q8WYN3 585 aa11.93□□□□□ -0.5
ABCE1-205ENST00000504683 ATXN8OSP0DMR3 200 aa11.9□□□□□ -0.5
ABCE1-205ENST00000504683 ZNF692Q9BU19 519 aaPredicted RBP11.87□□□□□ -0.51
ABCE1-205ENST00000504683 PRR29P0C7W0 189 aa11.82□□□□□ -0.52
ABCE1-205ENST00000504683 SSUH2Q9Y2M2 353 aa11.82□□□□□ -0.52
ABCE1-205ENST00000504683 CHADLQ6NUI6 762 aa11.8□□□□□ -0.52
ABCE1-205ENST00000504683 POTEIP0CG38 1075 aa11.76□□□□□ -0.53
ABCE1-205ENST00000504683 CD44P16070 742 aaKnown RBP11.76□□□□□ -0.53
ABCE1-205ENST00000504683 DCBLD2Q96PD2 775 aa11.76□□□□□ -0.53
ABCE1-205ENST00000504683 FARP1Q9Y4F1 1045 aaPredicted RBP11.66□□□□□ -0.54
ABCE1-205ENST00000504683 MKRN4PQ13434 485 aaPredicted RBP11.62□□□□□ -0.55
ABCE1-205ENST00000504683 PABPN1Q86U42 306 aaKnown RBP eCLIP11.62□□□□□ -0.55
ABCE1-205ENST00000504683 PCDH10Q9P2E7 1040 aa11.6□□□□□ -0.55
ABCE1-205ENST00000504683 POTEMA6NI47 508 aa11.56□□□□□ -0.56
ABCE1-205ENST00000504683 ZNF579Q8NAF0 562 aaKnown RBP11.56□□□□□ -0.56
ABCE1-205ENST00000504683 OTUD5Q96G74 571 aa11.51□□□□□ -0.57
ABCE1-205ENST00000504683 POTEGQ6S5H5 508 aa11.5□□□□□ -0.57
ABCE1-205ENST00000504683 ZRANB1Q9UGI0 708 aa11.49□□□□□ -0.57
ABCE1-205ENST00000504683 PAK3O75914 559 aaPredicted RBP11.4□□□□□ -0.58
ABCE1-205ENST00000504683 GALR2O43603 387 aaPredicted RBP11.37□□□□□ -0.59
ABCE1-205ENST00000504683 MAMSTRQ6ZN01 415 aa11.35□□□□□ -0.59
ABCE1-205ENST00000504683 POTEB2H3BUK9 544 aa11.34□□□□□ -0.59
ABCE1-205ENST00000504683 STAG3Q9UJ98 1225 aa11.33□□□□□ -0.6
ABCE1-205ENST00000504683 C7P10643 843 aa11.25□□□□□ -0.61
ABCE1-205ENST00000504683 CREBZFQ9NS37 354 aa11.25□□□□□ -0.61
ABCE1-205ENST00000504683 SLC39A7Q92504 469 aa11.24□□□□□ -0.61
ABCE1-205ENST00000504683 NPM1P06748 294 aaKnown RBP eCLIP11.22□□□□□ -0.61
ABCE1-205ENST00000504683 METRNQ9UJH8 293 aa11.2□□□□□ -0.62
ABCE1-205ENST00000504683 SCUBE2Q9NQ36 999 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 256.1 ms