RNA–Protein interactions for RNA: ENST00000504509.1

LINC01612-201, Transcript of long intergenic non-protein coding RNA 1612, humanhuman

TSL 3 BASIC

Gene LINC01612, Length 469 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01612-201ENST00000504509 AEBP2Q6ZN18 517 aaPredicted RBP26.47■■□□□ 1.83
LINC01612-201ENST00000504509 CHIC1Q5VXU3 224 aa26.08■■□□□ 1.77
LINC01612-201ENST00000504509 PHF23Q9BUL5 403 aaPredicted RBP23.04■■□□□ 1.28
LINC01612-201ENST00000504509 SENP3Q9H4L4 574 aaPredicted RBP22.26■■□□□ 1.15
LINC01612-201ENST00000504509 PLPPR3Q6T4P5 718 aa21.25■□□□□ 0.99
LINC01612-201ENST00000504509 FOXD1Q16676 465 aa20.85■□□□□ 0.93
LINC01612-201ENST00000504509 POTEDQ86YR6 584 aa20.59■□□□□ 0.89
LINC01612-201ENST00000504509 PPP6R1Q9UPN7 881 aa20.23■□□□□ 0.83
LINC01612-201ENST00000504509 ADRA2BP18089 450 aa20.18■□□□□ 0.82
LINC01612-201ENST00000504509 MSH5O43196 834 aa19.7■□□□□ 0.74
LINC01612-201ENST00000504509 PIAS4Q8N2W9 510 aaPredicted RBP19.54■□□□□ 0.72
LINC01612-201ENST00000504509 PPP4R3CPQ6ZMV5 832 aa18.81■□□□□ 0.6
LINC01612-201ENST00000504509 KCNA4P22459 653 aa18.77■□□□□ 0.6
LINC01612-201ENST00000504509 SCAF1Q9H7N4 1312 aaKnown RBP18.32■□□□□ 0.52
LINC01612-201ENST00000504509 NCBP3Q53F19 620 aaKnown RBP18.31■□□□□ 0.52
LINC01612-201ENST00000504509 MAPK8IP2Q13387 824 aaPredicted RBP18.25■□□□□ 0.51
LINC01612-201ENST00000504509 CNKSR2Q8WXI2 1034 aa18.18■□□□□ 0.5
LINC01612-201ENST00000504509 NPM3O75607 178 aaKnown RBP18.16■□□□□ 0.5
LINC01612-201ENST00000504509 DMRT2Q9Y5R5 561 aa17.87■□□□□ 0.45
LINC01612-201ENST00000504509 SLC4A1APQ9BWU0 796 aaKnown RBP17.86■□□□□ 0.45
LINC01612-201ENST00000504509 RNF216Q9NWF9 866 aaPredicted RBP17.76■□□□□ 0.43
LINC01612-201ENST00000504509 EHMT2Q96KQ7 1210 aa17.72■□□□□ 0.43
LINC01612-201ENST00000504509 HOXD11P31277 338 aaPredicted RBP17.64■□□□□ 0.41
LINC01612-201ENST00000504509 DNAJC5BQ9UF47 199 aa17.59■□□□□ 0.41
LINC01612-201ENST00000504509 CSRNP3Q8WYN3 585 aa17.45■□□□□ 0.38
LINC01612-201ENST00000504509 CACNB1Q02641 598 aaPredicted RBP17.44■□□□□ 0.38
LINC01612-201ENST00000504509 ZBTB22O15209 634 aa17.33■□□□□ 0.36
LINC01612-201ENST00000504509 SLC4A2P04920 1241 aa17.12■□□□□ 0.33
LINC01612-201ENST00000504509 FOXD4L1Q9NU39 408 aa17.12■□□□□ 0.33
LINC01612-201ENST00000504509 DCAF8L1A6NGE4 600 aa16.99■□□□□ 0.31
LINC01612-201ENST00000504509 RNF39Q9H2S5 420 aa16.78■□□□□ 0.28
LINC01612-201ENST00000504509 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.73■□□□□ 0.27
LINC01612-201ENST00000504509 MYCNP04198 464 aaPredicted RBP16.71■□□□□ 0.27
LINC01612-201ENST00000504509 U3KPZ7 1027 aaPredicted RBP16.58■□□□□ 0.24
LINC01612-201ENST00000504509 ATXN8OSP0DMR3 200 aa16.47■□□□□ 0.23
LINC01612-201ENST00000504509 C1QBPQ07021 282 aaKnown RBP16.45■□□□□ 0.22
LINC01612-201ENST00000504509 ATF5Q9Y2D1 282 aaPredicted RBP16.36■□□□□ 0.21
LINC01612-201ENST00000504509 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.34■□□□□ 0.21
LINC01612-201ENST00000504509 HNRNPUL2Q1KMD3 747 aaKnown RBP16.34■□□□□ 0.21
LINC01612-201ENST00000504509 SAMD1Q6SPF0 538 aaPredicted RBP16.34■□□□□ 0.21
LINC01612-201ENST00000504509 APLP2Q06481 763 aa16.06■□□□□ 0.16
LINC01612-201ENST00000504509 SPINK5Q9NQ38 1064 aaPredicted RBP16.03■□□□□ 0.16
LINC01612-201ENST00000504509 ZNF219Q9P2Y4 722 aaPredicted RBP15.98■□□□□ 0.15
LINC01612-201ENST00000504509 POTEHQ6S545 545 aa15.97■□□□□ 0.15
LINC01612-201ENST00000504509 TRHP20396 242 aaPredicted RBP15.89■□□□□ 0.13
LINC01612-201ENST00000504509 CAPN15O75808 1086 aa15.86■□□□□ 0.13
LINC01612-201ENST00000504509 POLA2Q14181 598 aa15.72■□□□□ 0.11
LINC01612-201ENST00000504509 FKBP8Q14318 412 aa15.69■□□□□ 0.1
LINC01612-201ENST00000504509 MKRN4PQ13434 485 aaPredicted RBP15.65■□□□□ 0.1
LINC01612-201ENST00000504509 ABCB7O75027 752 aa15.64■□□□□ 0.09
LINC01612-201ENST00000504509 DSG3P32926 999 aa15.6■□□□□ 0.09
LINC01612-201ENST00000504509 FBLN2P98095 1184 aa15.48■□□□□ 0.07
LINC01612-201ENST00000504509 ZBTB12Q9Y330 459 aaPredicted RBP15.39■□□□□ 0.05
LINC01612-201ENST00000504509 SPDYE4A6NLX3 237 aa15.36■□□□□ 0.05
LINC01612-201ENST00000504509 PROM2Q8N271 834 aa15.23■□□□□ 0.03
LINC01612-201ENST00000504509 OSCARQ8IYS5 282 aa15.19■□□□□ 0.02
LINC01612-201ENST00000504509 SPDYE2BA6NHP3 402 aa15.06■□□□□ 0
LINC01612-201ENST00000504509 SPDYE6P0CI01 402 aa15.06■□□□□ 0
LINC01612-201ENST00000504509 SPDYE2Q495Y8 402 aa15.06■□□□□ 0
LINC01612-201ENST00000504509 ZNF692Q9BU19 519 aaPredicted RBP15.05■□□□□ -0
LINC01612-201ENST00000504509 SSUH2Q9Y2M2 353 aa15.04■□□□□ -0
LINC01612-201ENST00000504509 FBXO3Q9UK99 471 aa14.96□□□□□ -0.01
LINC01612-201ENST00000504509 PABPN1Q86U42 306 aaKnown RBP eCLIP14.89□□□□□ -0.03
LINC01612-201ENST00000504509 RTN4Q9NQC3 1192 aaKnown RBP14.86□□□□□ -0.03
LINC01612-201ENST00000504509 VASPP50552 380 aaPredicted RBP14.82□□□□□ -0.04
LINC01612-201ENST00000504509 AMER1Q5JTC6 1135 aaPredicted RBP14.79□□□□□ -0.04
LINC01612-201ENST00000504509 CHRDL2Q6WN34 429 aa14.76□□□□□ -0.05
LINC01612-201ENST00000504509 RBM42Q9BTD8 480 aaKnown RBP14.74□□□□□ -0.05
LINC01612-201ENST00000504509 IFNLR1Q8IU57 520 aaPredicted RBP14.7□□□□□ -0.06
LINC01612-201ENST00000504509 AKT1S1Q96B36 256 aa14.69□□□□□ -0.06
LINC01612-201ENST00000504509 STAG3Q9UJ98 1225 aa14.68□□□□□ -0.06
LINC01612-201ENST00000504509 SP7Q8TDD2 431 aaPredicted RBP14.61□□□□□ -0.07
LINC01612-201ENST00000504509 REM2Q8IYK8 340 aaPredicted RBP14.58□□□□□ -0.08
LINC01612-201ENST00000504509 SPDYE1Q8NFV5 336 aaPredicted RBP14.52□□□□□ -0.09
LINC01612-201ENST00000504509 MIER1Q8N108 512 aa14.49□□□□□ -0.09
LINC01612-201ENST00000504509 PLCD3Q8N3E9 789 aa14.49□□□□□ -0.09
LINC01612-201ENST00000504509 CLEC11AQ9Y240 323 aa14.45□□□□□ -0.1
LINC01612-201ENST00000504509 KLHL34Q8N239 644 aa14.43□□□□□ -0.1
LINC01612-201ENST00000504509 PITPNM1O00562 1244 aa14.41□□□□□ -0.1
LINC01612-201ENST00000504509 SPOCK2Q92563 424 aa14.4□□□□□ -0.1
LINC01612-201ENST00000504509 PRR29P0C7W0 189 aa14.37□□□□□ -0.11
LINC01612-201ENST00000504509 PKD2Q13563 968 aa14.34□□□□□ -0.11
LINC01612-201ENST00000504509 CREBZFQ9NS37 354 aa14.34□□□□□ -0.11
LINC01612-201ENST00000504509 PLEKHG5O94827 1062 aa14.3□□□□□ -0.12
LINC01612-201ENST00000504509 PIP4P2Q8N4L2 257 aa14.28□□□□□ -0.12
LINC01612-201ENST00000504509 ZBTB47Q9UFB7 747 aaPredicted RBP14.27□□□□□ -0.13
LINC01612-201ENST00000504509 MNX1P50219 401 aaPredicted RBP14.26□□□□□ -0.13
LINC01612-201ENST00000504509 HAX1O00165 279 aa14.23□□□□□ -0.13
LINC01612-201ENST00000504509 NUBP1P53384 320 aa14.19□□□□□ -0.14
LINC01612-201ENST00000504509 CHADLQ6NUI6 762 aa14.13□□□□□ -0.15
LINC01612-201ENST00000504509 ECM2O94769 699 aaPredicted RBP14.11□□□□□ -0.15
LINC01612-201ENST00000504509 FXR2P51116 673 aaKnown RBP eCLIP14.1□□□□□ -0.15
LINC01612-201ENST00000504509 CIZ1Q9ULV3 898 aaPredicted RBP14.1□□□□□ -0.15
LINC01612-201ENST00000504509 EVX2Q03828 476 aa14.06□□□□□ -0.16
LINC01612-201ENST00000504509 RASEFQ8IZ41 740 aa14.04□□□□□ -0.16
LINC01612-201ENST00000504509 RGL2O15211 777 aa14.03□□□□□ -0.16
LINC01612-201ENST00000504509 PRKAR2AP13861 404 aaKnown RBP14.03□□□□□ -0.16
LINC01612-201ENST00000504509 GSE1Q14687 1217 aa14.01□□□□□ -0.17
LINC01612-201ENST00000504509 FARP1Q9Y4F1 1045 aaPredicted RBP14.01□□□□□ -0.17
LINC01612-201ENST00000504509 DCAF8Q5TAQ9 597 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms