RNA–Protein interactions for RNA: ENST00000504365.1

LINC00613-201, long intergenic non-protein coding RNA 613, humanhuman

TSL 3 BASIC

Gene LINC00613, Length 467 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00613-201ENST00000504365 AEBP2Q6ZN18 517 aaPredicted RBP25.55■■□□□ 1.68
LINC00613-201ENST00000504365 CHIC1Q5VXU3 224 aa25.02■■□□□ 1.6
LINC00613-201ENST00000504365 PHF23Q9BUL5 403 aaPredicted RBP22.16■■□□□ 1.14
LINC00613-201ENST00000504365 SENP3Q9H4L4 574 aaPredicted RBP21.4■■□□□ 1.02
LINC00613-201ENST00000504365 PLPPR3Q6T4P5 718 aa20.31■□□□□ 0.84
LINC00613-201ENST00000504365 FOXD1Q16676 465 aa20■□□□□ 0.79
LINC00613-201ENST00000504365 PPP6R1Q9UPN7 881 aa19.51■□□□□ 0.71
LINC00613-201ENST00000504365 ADRA2BP18089 450 aa19.43■□□□□ 0.7
LINC00613-201ENST00000504365 PIAS4Q8N2W9 510 aaPredicted RBP18.78■□□□□ 0.6
LINC00613-201ENST00000504365 MSH5O43196 834 aa18.16■□□□□ 0.5
LINC00613-201ENST00000504365 PPP4R3CPQ6ZMV5 832 aa18■□□□□ 0.47
LINC00613-201ENST00000504365 KCNA4P22459 653 aa17.88■□□□□ 0.45
LINC00613-201ENST00000504365 MAPK8IP2Q13387 824 aaPredicted RBP17.62■□□□□ 0.41
LINC00613-201ENST00000504365 SCAF1Q9H7N4 1312 aaKnown RBP17.52■□□□□ 0.4
LINC00613-201ENST00000504365 NCBP3Q53F19 620 aaKnown RBP17.42■□□□□ 0.38
LINC00613-201ENST00000504365 CNKSR2Q8WXI2 1034 aa17.39■□□□□ 0.37
LINC00613-201ENST00000504365 NPM3O75607 178 aaKnown RBP17.36■□□□□ 0.37
LINC00613-201ENST00000504365 DMRT2Q9Y5R5 561 aa17.19■□□□□ 0.34
LINC00613-201ENST00000504365 POTEDQ86YR6 584 aa17.01■□□□□ 0.31
LINC00613-201ENST00000504365 RNF216Q9NWF9 866 aaPredicted RBP17.01■□□□□ 0.31
LINC00613-201ENST00000504365 HOXD11P31277 338 aaPredicted RBP16.95■□□□□ 0.3
LINC00613-201ENST00000504365 SLC4A1APQ9BWU0 796 aaKnown RBP16.95■□□□□ 0.3
LINC00613-201ENST00000504365 DNAJC5BQ9UF47 199 aa16.81■□□□□ 0.28
LINC00613-201ENST00000504365 EHMT2Q96KQ7 1210 aa16.74■□□□□ 0.27
LINC00613-201ENST00000504365 CSRNP3Q8WYN3 585 aa16.57■□□□□ 0.24
LINC00613-201ENST00000504365 ZBTB22O15209 634 aa16.54■□□□□ 0.24
LINC00613-201ENST00000504365 SLC4A2P04920 1241 aa16.42■□□□□ 0.22
LINC00613-201ENST00000504365 DCAF8L1A6NGE4 600 aa16.33■□□□□ 0.2
LINC00613-201ENST00000504365 FOXD4L1Q9NU39 408 aa16.28■□□□□ 0.2
LINC00613-201ENST00000504365 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.03■□□□□ 0.16
LINC00613-201ENST00000504365 U3KPZ7 1027 aaPredicted RBP15.93■□□□□ 0.14
LINC00613-201ENST00000504365 MYCNP04198 464 aaPredicted RBP15.92■□□□□ 0.14
LINC00613-201ENST00000504365 RNF39Q9H2S5 420 aa15.71■□□□□ 0.11
LINC00613-201ENST00000504365 ATF5Q9Y2D1 282 aaPredicted RBP15.7■□□□□ 0.1
LINC00613-201ENST00000504365 ATXN8OSP0DMR3 200 aa15.66■□□□□ 0.1
LINC00613-201ENST00000504365 SAMD1Q6SPF0 538 aaPredicted RBP15.57■□□□□ 0.08
LINC00613-201ENST00000504365 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.56■□□□□ 0.08
LINC00613-201ENST00000504365 HNRNPUL2Q1KMD3 747 aaKnown RBP15.56■□□□□ 0.08
LINC00613-201ENST00000504365 SPINK5Q9NQ38 1064 aaPredicted RBP15.45■□□□□ 0.06
LINC00613-201ENST00000504365 C1QBPQ07021 282 aaKnown RBP15.44■□□□□ 0.06
LINC00613-201ENST00000504365 APLP2Q06481 763 aa15.28■□□□□ 0.04
LINC00613-201ENST00000504365 ZNF219Q9P2Y4 722 aaPredicted RBP15.28■□□□□ 0.04
LINC00613-201ENST00000504365 TRHP20396 242 aaPredicted RBP15.24■□□□□ 0.03
LINC00613-201ENST00000504365 CAPN15O75808 1086 aa15.23■□□□□ 0.03
LINC00613-201ENST00000504365 POLA2Q14181 598 aa15.08■□□□□ 0
LINC00613-201ENST00000504365 CACNB1Q02641 598 aaPredicted RBP15.06■□□□□ 0
LINC00613-201ENST00000504365 ABCB7O75027 752 aa15.04■□□□□ -0
LINC00613-201ENST00000504365 DSG3P32926 999 aa15.04■□□□□ -0
LINC00613-201ENST00000504365 MKRN4PQ13434 485 aaPredicted RBP15□□□□□ -0.01
LINC00613-201ENST00000504365 FKBP8Q14318 412 aa14.85□□□□□ -0.03
LINC00613-201ENST00000504365 FBLN2P98095 1184 aa14.73□□□□□ -0.05
LINC00613-201ENST00000504365 ZBTB12Q9Y330 459 aaPredicted RBP14.66□□□□□ -0.06
LINC00613-201ENST00000504365 SPDYE4A6NLX3 237 aa14.61□□□□□ -0.07
LINC00613-201ENST00000504365 OSCARQ8IYS5 282 aa14.56□□□□□ -0.08
LINC00613-201ENST00000504365 PROM2Q8N271 834 aa14.51□□□□□ -0.09
LINC00613-201ENST00000504365 SPDYE2BA6NHP3 402 aa14.39□□□□□ -0.11
LINC00613-201ENST00000504365 SPDYE6P0CI01 402 aa14.39□□□□□ -0.11
LINC00613-201ENST00000504365 SPDYE2Q495Y8 402 aa14.39□□□□□ -0.11
LINC00613-201ENST00000504365 SSUH2Q9Y2M2 353 aa14.39□□□□□ -0.11
LINC00613-201ENST00000504365 ZNF692Q9BU19 519 aaPredicted RBP14.38□□□□□ -0.11
LINC00613-201ENST00000504365 PABPN1Q86U42 306 aaKnown RBP eCLIP14.24□□□□□ -0.13
LINC00613-201ENST00000504365 RBM42Q9BTD8 480 aaKnown RBP14.12□□□□□ -0.15
LINC00613-201ENST00000504365 FBXO3Q9UK99 471 aa14.12□□□□□ -0.15
LINC00613-201ENST00000504365 AKT1S1Q96B36 256 aa14.09□□□□□ -0.15
LINC00613-201ENST00000504365 VASPP50552 380 aaPredicted RBP14.04□□□□□ -0.16
LINC00613-201ENST00000504365 REM2Q8IYK8 340 aaPredicted RBP14.03□□□□□ -0.16
LINC00613-201ENST00000504365 IFNLR1Q8IU57 520 aaPredicted RBP13.97□□□□□ -0.17
LINC00613-201ENST00000504365 RTN4Q9NQC3 1192 aaKnown RBP13.94□□□□□ -0.18
LINC00613-201ENST00000504365 STAG3Q9UJ98 1225 aa13.94□□□□□ -0.18
LINC00613-201ENST00000504365 SPDYE1Q8NFV5 336 aaPredicted RBP13.88□□□□□ -0.19
LINC00613-201ENST00000504365 PITPNM1O00562 1244 aa13.87□□□□□ -0.19
LINC00613-201ENST00000504365 CLEC11AQ9Y240 323 aa13.84□□□□□ -0.19
LINC00613-201ENST00000504365 AMER1Q5JTC6 1135 aaPredicted RBP13.81□□□□□ -0.2
LINC00613-201ENST00000504365 MIER1Q8N108 512 aa13.8□□□□□ -0.2
LINC00613-201ENST00000504365 PLCD3Q8N3E9 789 aa13.76□□□□□ -0.21
LINC00613-201ENST00000504365 PRR29P0C7W0 189 aa13.74□□□□□ -0.21
LINC00613-201ENST00000504365 CREBZFQ9NS37 354 aa13.74□□□□□ -0.21
LINC00613-201ENST00000504365 MNX1P50219 401 aaPredicted RBP13.69□□□□□ -0.22
LINC00613-201ENST00000504365 KLHL34Q8N239 644 aa13.67□□□□□ -0.22
LINC00613-201ENST00000504365 SPOCK2Q92563 424 aa13.64□□□□□ -0.23
LINC00613-201ENST00000504365 CHADLQ6NUI6 762 aa13.61□□□□□ -0.23
LINC00613-201ENST00000504365 PKD2Q13563 968 aa13.6□□□□□ -0.23
LINC00613-201ENST00000504365 FXR2P51116 673 aaKnown RBP eCLIP13.59□□□□□ -0.23
LINC00613-201ENST00000504365 CHRDL2Q6WN34 429 aa13.57□□□□□ -0.24
LINC00613-201ENST00000504365 PLEKHG5O94827 1062 aa13.56□□□□□ -0.24
LINC00613-201ENST00000504365 NUBP1P53384 320 aa13.55□□□□□ -0.24
LINC00613-201ENST00000504365 PIP4P2Q8N4L2 257 aa13.51□□□□□ -0.25
LINC00613-201ENST00000504365 ZBTB47Q9UFB7 747 aaPredicted RBP13.5□□□□□ -0.25
LINC00613-201ENST00000504365 PRKAR2AP13861 404 aaKnown RBP13.48□□□□□ -0.25
LINC00613-201ENST00000504365 RASEFQ8IZ41 740 aa13.43□□□□□ -0.26
LINC00613-201ENST00000504365 FARP1Q9Y4F1 1045 aaPredicted RBP13.43□□□□□ -0.26
LINC00613-201ENST00000504365 CIZ1Q9ULV3 898 aaPredicted RBP13.37□□□□□ -0.27
LINC00613-201ENST00000504365 ECM2O94769 699 aaPredicted RBP13.33□□□□□ -0.28
LINC00613-201ENST00000504365 NPM1P06748 294 aaKnown RBP eCLIP13.33□□□□□ -0.28
LINC00613-201ENST00000504365 DCAF8Q5TAQ9 597 aa13.32□□□□□ -0.28
LINC00613-201ENST00000504365 RGL2O15211 777 aa13.31□□□□□ -0.28
LINC00613-201ENST00000504365 GSE1Q14687 1217 aa13.28□□□□□ -0.28
LINC00613-201ENST00000504365 RNF25Q96BH1 459 aaPredicted RBP13.25□□□□□ -0.29
LINC00613-201ENST00000504365 FAM212AQ96EL1 285 aa13.25□□□□□ -0.29
LINC00613-201ENST00000504365 TSPYL2Q9H2G4 693 aaPredicted RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 701.7 ms