RNA–Protein interactions for RNA: ENST00000504292.1

ABCE1-204, Transcript of ATP binding cassette subfamily E member 1, humanhuman

TSL 3

Gene ABCE1, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCE1-204ENST00000504292 AEBP2Q6ZN18 517 aaPredicted RBP33.31■■■□□ 2.92
ABCE1-204ENST00000504292 CHIC1Q5VXU3 224 aa32.17■■■□□ 2.74
ABCE1-204ENST00000504292 SENP3Q9H4L4 574 aaPredicted RBP28.34■■■□□ 2.13
ABCE1-204ENST00000504292 PHF23Q9BUL5 403 aaPredicted RBP28.24■■■□□ 2.11
ABCE1-204ENST00000504292 FOXD1Q16676 465 aa26.33■■□□□ 1.81
ABCE1-204ENST00000504292 PLPPR3Q6T4P5 718 aa25.95■■□□□ 1.74
ABCE1-204ENST00000504292 PPP6R1Q9UPN7 881 aa25.02■■□□□ 1.6
ABCE1-204ENST00000504292 ADRA2BP18089 450 aa24.97■■□□□ 1.59
ABCE1-204ENST00000504292 PIAS4Q8N2W9 510 aaPredicted RBP24.75■■□□□ 1.55
ABCE1-204ENST00000504292 MSH5O43196 834 aa24.46■■□□□ 1.51
ABCE1-204ENST00000504292 POTEDQ86YR6 584 aa22.93■■□□□ 1.26
ABCE1-204ENST00000504292 SCAF1Q9H7N4 1312 aaKnown RBP22.86■■□□□ 1.25
ABCE1-204ENST00000504292 PPP4R3CPQ6ZMV5 832 aa22.8■■□□□ 1.24
ABCE1-204ENST00000504292 MAPK8IP2Q13387 824 aaPredicted RBP22.77■■□□□ 1.24
ABCE1-204ENST00000504292 DMRT2Q9Y5R5 561 aa22.57■■□□□ 1.2
ABCE1-204ENST00000504292 CNKSR2Q8WXI2 1034 aa22.26■■□□□ 1.15
ABCE1-204ENST00000504292 NCBP3Q53F19 620 aaKnown RBP22.1■■□□□ 1.13
ABCE1-204ENST00000504292 HOXD11P31277 338 aaPredicted RBP21.94■■□□□ 1.1
ABCE1-204ENST00000504292 RNF216Q9NWF9 866 aaPredicted RBP21.93■■□□□ 1.1
ABCE1-204ENST00000504292 KCNA4P22459 653 aa21.84■■□□□ 1.09
ABCE1-204ENST00000504292 NPM3O75607 178 aaKnown RBP21.79■■□□□ 1.08
ABCE1-204ENST00000504292 DCAF8L1A6NGE4 600 aa21.57■■□□□ 1.04
ABCE1-204ENST00000504292 DNAJC5BQ9UF47 199 aa21.24■□□□□ 0.99
ABCE1-204ENST00000504292 RNF39Q9H2S5 420 aa20.92■□□□□ 0.94
ABCE1-204ENST00000504292 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.89■□□□□ 0.93
ABCE1-204ENST00000504292 SLC4A1APQ9BWU0 796 aaKnown RBP20.73■□□□□ 0.91
ABCE1-204ENST00000504292 SLC4A2P04920 1241 aa20.66■□□□□ 0.9
ABCE1-204ENST00000504292 C1QBPQ07021 282 aaKnown RBP20.64■□□□□ 0.89
ABCE1-204ENST00000504292 CACNB1Q02641 598 aaPredicted RBP20.62■□□□□ 0.89
ABCE1-204ENST00000504292 U3KPZ7 1027 aaPredicted RBP20.53■□□□□ 0.88
ABCE1-204ENST00000504292 FOXD4L1Q9NU39 408 aa20.24■□□□□ 0.83
ABCE1-204ENST00000504292 MYCNP04198 464 aaPredicted RBP20.15■□□□□ 0.82
ABCE1-204ENST00000504292 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.14■□□□□ 0.81
ABCE1-204ENST00000504292 HNRNPUL2Q1KMD3 747 aaKnown RBP20.14■□□□□ 0.81
ABCE1-204ENST00000504292 ZBTB22O15209 634 aa20.11■□□□□ 0.81
ABCE1-204ENST00000504292 SAMD1Q6SPF0 538 aaPredicted RBP20.06■□□□□ 0.8
ABCE1-204ENST00000504292 SPINK5Q9NQ38 1064 aaPredicted RBP20.05■□□□□ 0.8
ABCE1-204ENST00000504292 APLP2Q06481 763 aa20.02■□□□□ 0.8
ABCE1-204ENST00000504292 CAPN15O75808 1086 aa19.99■□□□□ 0.79
ABCE1-204ENST00000504292 ZNF219Q9P2Y4 722 aaPredicted RBP19.81■□□□□ 0.76
ABCE1-204ENST00000504292 TRHP20396 242 aaPredicted RBP19.79■□□□□ 0.76
ABCE1-204ENST00000504292 DSG3P32926 999 aa19.76■□□□□ 0.75
ABCE1-204ENST00000504292 EHMT2Q96KQ7 1210 aa19.69■□□□□ 0.74
ABCE1-204ENST00000504292 CSRNP3Q8WYN3 585 aa19.65■□□□□ 0.74
ABCE1-204ENST00000504292 ATF5Q9Y2D1 282 aaPredicted RBP19.61■□□□□ 0.73
ABCE1-204ENST00000504292 ABCB7O75027 752 aa19.58■□□□□ 0.72
ABCE1-204ENST00000504292 ATXN8OSP0DMR3 200 aa19.56■□□□□ 0.72
ABCE1-204ENST00000504292 POLA2Q14181 598 aa19.39■□□□□ 0.69
ABCE1-204ENST00000504292 ZBTB12Q9Y330 459 aaPredicted RBP19.08■□□□□ 0.64
ABCE1-204ENST00000504292 RBM42Q9BTD8 480 aaKnown RBP18.85■□□□□ 0.61
ABCE1-204ENST00000504292 FBLN2P98095 1184 aa18.82■□□□□ 0.6
ABCE1-204ENST00000504292 OSCARQ8IYS5 282 aa18.78■□□□□ 0.6
ABCE1-204ENST00000504292 MKRN4PQ13434 485 aaPredicted RBP18.76■□□□□ 0.59
ABCE1-204ENST00000504292 AKT1S1Q96B36 256 aa18.53■□□□□ 0.56
ABCE1-204ENST00000504292 SPDYE2BA6NHP3 402 aa18.52■□□□□ 0.56
ABCE1-204ENST00000504292 SPDYE6P0CI01 402 aa18.52■□□□□ 0.56
ABCE1-204ENST00000504292 SPDYE2Q495Y8 402 aa18.52■□□□□ 0.56
ABCE1-204ENST00000504292 ZNF692Q9BU19 519 aaPredicted RBP18.36■□□□□ 0.53
ABCE1-204ENST00000504292 SSUH2Q9Y2M2 353 aa18.35■□□□□ 0.53
ABCE1-204ENST00000504292 REM2Q8IYK8 340 aaPredicted RBP18.34■□□□□ 0.53
ABCE1-204ENST00000504292 CHRDL2Q6WN34 429 aa18.21■□□□□ 0.51
ABCE1-204ENST00000504292 PITPNM1O00562 1244 aa18.15■□□□□ 0.5
ABCE1-204ENST00000504292 SPDYE4A6NLX3 237 aa18.14■□□□□ 0.49
ABCE1-204ENST00000504292 PABPN1Q86U42 306 aaKnown RBP eCLIP18.12■□□□□ 0.49
ABCE1-204ENST00000504292 POTEHQ6S545 545 aa18.08■□□□□ 0.48
ABCE1-204ENST00000504292 SPDYE1Q8NFV5 336 aaPredicted RBP18.07■□□□□ 0.48
ABCE1-204ENST00000504292 CLEC11AQ9Y240 323 aa17.97■□□□□ 0.47
ABCE1-204ENST00000504292 PIP4P2Q8N4L2 257 aa17.9■□□□□ 0.46
ABCE1-204ENST00000504292 FXR2P51116 673 aaKnown RBP eCLIP17.89■□□□□ 0.45
ABCE1-204ENST00000504292 PROM2Q8N271 834 aa17.82■□□□□ 0.44
ABCE1-204ENST00000504292 FKBP8Q14318 412 aa17.79■□□□□ 0.44
ABCE1-204ENST00000504292 PRR29P0C7W0 189 aa17.76■□□□□ 0.43
ABCE1-204ENST00000504292 STAG3Q9UJ98 1225 aa17.75■□□□□ 0.43
ABCE1-204ENST00000504292 PRKAR2AP13861 404 aaKnown RBP17.68■□□□□ 0.42
ABCE1-204ENST00000504292 CHADLQ6NUI6 762 aa17.58■□□□□ 0.4
ABCE1-204ENST00000504292 CREBZFQ9NS37 354 aa17.47■□□□□ 0.39
ABCE1-204ENST00000504292 HAX1O00165 279 aa17.4■□□□□ 0.38
ABCE1-204ENST00000504292 FARP1Q9Y4F1 1045 aaPredicted RBP17.4■□□□□ 0.38
ABCE1-204ENST00000504292 C19orf67A6NJJ6 358 aa17.3■□□□□ 0.36
ABCE1-204ENST00000504292 FBXO3Q9UK99 471 aa17.27■□□□□ 0.36
ABCE1-204ENST00000504292 MNX1P50219 401 aaPredicted RBP17.25■□□□□ 0.35
ABCE1-204ENST00000504292 EVX2Q03828 476 aa17.22■□□□□ 0.35
ABCE1-204ENST00000504292 MIER1Q8N108 512 aa17.22■□□□□ 0.35
ABCE1-204ENST00000504292 SP7Q8TDD2 431 aaPredicted RBP17.21■□□□□ 0.35
ABCE1-204ENST00000504292 PLEKHG5O94827 1062 aa17.18■□□□□ 0.34
ABCE1-204ENST00000504292 PLCD3Q8N3E9 789 aa17.17■□□□□ 0.34
ABCE1-204ENST00000504292 NPM1P06748 294 aaKnown RBP eCLIP17.16■□□□□ 0.34
ABCE1-204ENST00000504292 CD44P16070 742 aaKnown RBP17.16■□□□□ 0.34
ABCE1-204ENST00000504292 VASPP50552 380 aaPredicted RBP17.06■□□□□ 0.32
ABCE1-204ENST00000504292 ZBTB47Q9UFB7 747 aaPredicted RBP17.03■□□□□ 0.32
ABCE1-204ENST00000504292 ZRANB1Q9UGI0 708 aa16.99■□□□□ 0.31
ABCE1-204ENST00000504292 PAK3O75914 559 aaPredicted RBP16.98■□□□□ 0.31
ABCE1-204ENST00000504292 ZNF579Q8NAF0 562 aaKnown RBP16.94■□□□□ 0.3
ABCE1-204ENST00000504292 GABBR2O75899 941 aa16.88■□□□□ 0.29
ABCE1-204ENST00000504292 RASEFQ8IZ41 740 aa16.87■□□□□ 0.29
ABCE1-204ENST00000504292 NUBP1P53384 320 aa16.85■□□□□ 0.29
ABCE1-204ENST00000504292 TSPYL2Q9H2G4 693 aaPredicted RBP16.85■□□□□ 0.29
ABCE1-204ENST00000504292 CLCN6P51797 869 aa16.83■□□□□ 0.28
ABCE1-204ENST00000504292 KLHL34Q8N239 644 aa16.82■□□□□ 0.28
ABCE1-204ENST00000504292 PHF12Q96QT6 1004 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms